Conserved Protein Domain Family
PGAP4

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cd22190: PGAP4 
Post-GPI attachment to proteins factor 4
Post-GPI attachment to proteins factor 4 (PGAP4), also known as post-GPI attachment to proteins GalNAc transferase 4 or transmembrane protein 246 (TMEM246), has been shown to be a Golgi-resident GPI-GalNAc transferase. Many eukaryotic proteins are anchored to the cell surface through glycolipid glycosylphosphatidylinositol (GPI). GPIs have a conserved core but exhibit diverse N-acetylgalactosamine (GalNAc) modifications. PGAP4 knockout cells lose GPI-GalNAc structures. PGAP4 is most likely involved in the initial steps of GPI-GalNAc biosynthesis. In contrast to other Golgi glycotransferases (GTs), it contains three transmembrane domains. Structural modeling suggests that PGAP4 adopts a GT-A fold split by an insertion of tandem transmembrane domains.
Statistics
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PSSM-Id: 409191
Aligned: 56 rows
Threshold Bit Score: 315.695
Created: 15-Jul-2020
Updated: 17-Aug-2020
Structure
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Aligned Rows:
 
Feature 1: putative catalytic site [active site], 4 residue positions
Conserved feature residue pattern:E D D DClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
Q9BRR3        23 TAVQLFILTVVTFGLLAplACHRLLHSYFYlrhWHLNQMSQEFLQQSLKEGEAALHYFEELpsangsvp------ivwqa 96  human
XP_021347490   8 HFRRLLILYLITFTFIVpiLCYFLPYSKLFkvfHSEKEMLINAKDLNKERLADANAYFNSIdktesrqf------ynqhn 81  Yesso scallop
XP_009055124  32 DITKLVILFIVQFCVILplFYWNVPWSAYFkirNRKTNFDKLATEQNFLRVNGAKEYFKSLdpksslrwy---dnvlynh 108 owl limpet
XP_002108445  18 VLAIASLVFFVTFLVIMplTCRNLSFSYYYk-kHELNNYINKKLHQNEARAHKANEQLQQFiqnigpdrlk-eefnkrlh 95  Trichoplax adha...
XP_031571823   7 VLFFLYLWSIITFAIILpwLCQDLGFSQYY---RSSKLTKEKLENFNSRRTVEAFHFFSHLraqpqsvfs---lnepryi 80  Australian red ...
XP_001636904  19 WLLIMVYLYIATFMFFLpwFCRDLGFSMYY---TKSDHTIDQLREVNRARTLKARDFLSSTsklsiwdf------fngek 89  starlet sea ane...
XP_020627438   7 IGIYVATIYISTFVLVLplLCHKLGFSTYF---NKPKEPYKYLEAENKERTEEARKYFNSLykstttf-------pqyge 76  Orbicella faveo...
XP_015779733  20 GLLVAFIIYIVTFTLLLplACQKLGFSTYF---IKPKDPYKLIEVENEARTKKAKEILQGFqrsaapf-------hvldq 89  Acropora digiti...
XP_027055200   7 LMTATAVVYITTFLFALplMCHKLGFSSYF---RSPTKAYEFLEAQNEERIMNARNFFRNFdgkvd-----------yth 72  Pocillopora dam...
XP_020900634  21 LWIGILYIYITTFGLILpwLCQDLGYSSYY---NPSLQSKEKIDLANDMRTSIAYKTLRKMpkkfksiqdissyyxpkyk 97  Exaiptasia pallida
Feature 1                                                                                        
Q9BRR3        97 tpRPWLVITIITVDRQPg----fHYVLQVVSQFHRLLQQCgpqCEGHQLFLCNVERs-VSHFDAKLLSKYVPVAnryegt 171 human
XP_021347490  82 qeRLDLLVVIVTVQRKSadlqklGYFLQATAAMDKLLKHNq-sFRKKKLVICNVDAkpINHTDVTFLSTFIPTIqrygps 160 Yesso scallop
XP_009055124 109 gnDLDMVVAIITMSRKKkqk-dlGYLLQSTWKMDKIVKDQe--RTSIFTFVCNVDKdpSNFEEANYLRSYLPYVerfggs 185 owl limpet
XP_002108445  96 qpHQQFCFGLVSTGRKYn----pKYLTQVVARLIPQIYKDt--STTLIIYNANSPP--KINRDAVQLSKYLPIVtrsssk 167 Trichoplax adha...
XP_031571823  81 eeNLRIAFVVVSVRRQSn----pHYLLQVVARLLSQTRGEtdtKWKTKIVVLNADTnpSVNKDAEYLENYLTVIstrtsh 156 Australian red ...
XP_001636904  90 reDLEFAFIVVSVRRQEn----sNYLLQVAARLIDQTLREk--ETPTAAVVVNVDAepDLNEDANALSKYMTVLnqkeil 163 starlet sea ane...
XP_020627438  77 kvQIDFSIVLLTAHRGSn----tHYSLQVASRLLPQVISD---EGRSVLTILNSDPqpGMNEDAAYLSNFITVVnssl-- 147 Orbicella faveo...
XP_015779733  90 rrQIEFSIVLMTSFRTPn----tHYLLQGAARLLPQVRHD---GGKSVITILNCDAhpEQNKDALYLSNFVTMVncsvp- 161 Acropora digiti...
XP_027055200  73 dsQIEFSTVLLTAYRASn----tHYPLQVAARLLPQVIND---EGKTVFTVLNFDP--QLNEDVAYLSHFVNVIngsa-- 141 Pocillopora dam...
XP_020900634  98 esSIKVTFVVVSVSRPAn----pHYLVQVVSRLLDQTLKNn-xEISSKIIVFBADEkpSQNKDIEFVSXYVTVVskedln 172 Exaiptasia pallida
Feature 1                                                            ###                         
Q9BRR3       172 ed-------------dygddpstNSFEKEKQDYVYCLESSLQtynPDYVLMVEDDAVPEEQIFPVLEHLLRARfse---p 235 human
XP_021347490 161 grdlsrst-tplraalydkhlhrNRYEKETVDYMFCLESAYHm-nSSYILMMEDDAIPHREVLSNVKHVMDTKlhh---- 234 Yesso scallop
XP_009055124 186 rphvadvpipdtnltfrnyvskdKGYIKETIDYSFCLKVAKTr-kSKYVLVLEDDAVARDDFLLILDHIFKYRfqh---n 261 owl limpet
XP_002108445 168 -----------------nqqyndGTASKESVDYLYILKKCIQt-nARYIIILEDDALPTTDFIENLHYIIHKTlptd-sl 228 Trichoplax adha...
XP_031571823 157 kg--------------snisvidNVHEKEKQDYVLALKIGASl-nADYTVIIEDDALPDRDFLQKLKFLINWKiswl--r 219 Australian red ...
XP_001636904 164 rk-------------anwtflydSVYEKEKQDYAFALEVGVRl-gAKYTVIIEDDALPDTQLIKKLQLVLKHRlpkpwfk 229 starlet sea ane...
XP_020627438 148 -------------------pvtsASRSREKEDYVVGLEIGVRh-nSTYVLMIEDDALPSERLLSHLRYVLTYKmpgkflk 207 Orbicella faveo...
XP_015779733 162 -------------------vvsdAVHSRQKDDYVLGLRTAVKh-nATYVLMIEDDAVPSEDFLNHLRFVLKHKmpwkflk 221 Acropora digiti...
XP_027055200 142 -------------------ygnaASRSREKEDYIMGLETALKh-nSTYILMLEDDALPSNNLLNNLRFVLNHRmpgrllk 201 Pocillopora dam...
XP_020900634 173 f---------------rndtsdlHVYEKEKLDYLLALQLGIQe-nAEYTVVIEDDALPDINFIRNLSFLIKWKipwl--x 234 Exaiptasia pallida
Feature 1                                                                                        
Q9BRR3       236 hlRDALYLKLYHPERLQHYINPEpmrILEWVGVGMLLGPLLTWIYMRFAsrpg------------fswPVMLFFSLYSMG 303 human
XP_021347490 235 nsREFGYIKLYYPQKWQGFAFEEt-rIIELLSIGCMGAGIFVFFLICLLddrkkss------pfsiqiLYFLAGCIYFIL 307 Yesso scallop
XP_009055124 262 inMPWAALKLYYPEKWTGYAYELd-rLIELCSTGIVGSTIFTFLCYLILglfktf-------kkfntyLFFTIGFIFTVC 333 owl limpet
XP_002108445 229 srSTWAFIKLYYPEKWQGWGNPE---VPELIITSGQLATVFAIVWNILSwkniflrg---yrriflswLIFIIVLCYAIL 302 Trichoplax adha...
XP_031571823 220 tkPGWAFLKLYYPEKWQGFGNTE---IPELILIFIFGGAIPTVIYLYIFlnlkrlriykykcqmvmiiLLFISCGLYCMM 296 Australian red ...
XP_001636904 230 phNDWSFIKLYYPEKWQGFGNTE---IHELICIFIFGGVIAVLIHVRILksrnl----------qiqvFLFFALGIFFVA 296 starlet sea ane...
XP_020627438 208 srRDWVFLKLYYPEKWQGFGWPE---LPELVLIGILGGSLAVWVQLKMRtttrr---------kvslyCTFTVWGVYVIL 275 Orbicella faveo...
XP_015779733 222 qrNDWAFLKLYYPEKWQGFGWPE---LPELIVIGFVGGCFAVWMDLKCRarirrk--------llplvCSFIVWSAYFVL 290 Acropora digiti...
XP_027055200 202 srRDWAFLKLYYPEKWQGFGWPQ---VPELLLVGLFGGCLAVWIQLKIErrrr-----------hsisLTFTLWAVYAML 267 Pocillopora dam...
XP_020900634 235 sfPKWAFIKLYYPEKWQGFGNTE---IPELVVIFLISGALSTILCLRLGnnqgl----------xtxlFIFITSGXYFTC 301 Exaiptasia pallida
Feature 1                                                                    #                   
Q9BRR3       304 LVELVGRHYFLELRRLSPSLYSv-vPASQCCTPAMLFPapaarrtltYLSQVYCHKGFGKDMALYSLLRAKGERAYVvEP 382 human
XP_021347490 308 IAELLDRQNIMELRRFSPSLYSf-kKSPGCCTQAMLYSdhilpslvnFLQDYARPGMDHTDIAIYKFTLKHNIPCYQiEP 386 Yesso scallop
XP_009055124 334 SCCAIGRQNILEFRRFLPFTYQv-lPSPNCCTVAMLYHssildelsdSMYHNAFGQKMKADFALANFIQNSKLPAYMiFP 412 owl limpet
XP_002108445 303 FLALLGRQHLIELRKLSRSFYTl-vPAPECCTPAIIYPldka--illADYLANNSLERPIDFIIDDFIKKNKLEKFLiLP 379 Trichoplax adha...
XP_031571823 297 AAYTIGRAHLIELGKISPLFYRv-tQAPGCCTPCVLYPraylkdiieFLESKKCKKSYPLDFALDDFVAVQHLVKYLaSP 375 Australian red ...
XP_001636904 297 VAYGVGRAHWIELRKLVFPFYTv-sKAPNCCTPAVLYPkehlknlagFLTTKTCSKTYPLDFAIDEYAEKLRLQKYLvTP 375 starlet sea ane...
XP_020627438 276 VVYTVGRAHWIELRKLSPVMYSv-vKAPGCCTPGVLYPrsharnlanFLKSVQCSEKYPMDVAIDDFANKMNLERYLvIP 354 Orbicella faveo...
XP_015779733 291 VACSVKRTHLIELRKLFLPFMYsvvKAPGCCIPGVLFQkshalelanYLESIQCSVNYPVDVAMDDFADKRNLERYLvVP 370 Acropora digiti...
XP_027055200 268 LSYTVGRVHWIELRKLSPFLFSv-vQAARCCTPGVLYNrshardlanFLYSVQCSEKYPLDFAIDDFADKSNLERYLvVP 346 Pocillopora dam...
XP_020900634 302 VAYTIGRAHLIELGKTSXIFYRi-tKAQGCCTPAVLYPkehisdlvqFLRKKTCSVDYPFDFALDDFVTSKKLVKYLaSP 380 Exaiptasia pallida
Feature 1                      
Q9BRR3       383 NLVKHIGLFSSLRY 396 human
XP_021347490 387 NLFHHVGLYTSLVE 400 Yesso scallop
XP_009055124 413 SLFRHIGRISSLPK 426 owl limpet
XP_002108445 380 NLVSHIGLISSLSH 393 Trichoplax adhaerens
XP_031571823 376 NLVSHIGFHSSLGG 389 Australian red waratah sea anemone
XP_001636904 376 NLFTHIGFHSSLNK 389 starlet sea anemone
XP_020627438 355 NMISHIGVHSSLGS 368 Orbicella faveolata
XP_015779733 371 NMFSHIGLHSSLNN 384 Acropora digitifera
XP_027055200 347 NMVSHIGVHSSLSN 360 Pocillopora damicornis
XP_020900634 381 NMFSHIGFHSSLNK 394 Exaiptasia pallida

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