1WJT,1PQV


Conserved Protein Domain Family
TFS2N

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smart00509: TFS2N 
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Domain in the N-terminus of transcription elongation factor S-II (and elsewhere)
Statistics
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PSSM-Id: 197766
Aligned: 22 rows
Threshold Bit Score: 58.4764
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WJT_A          14 LLRIAKKLEKMVSRK------K-TEGALDLLKKLN--SCQ--MSIQLLQTTRIGVAVNGVRKHC-SDkEVVSLAKVLIKN 81  house mouse
TIGR:At2g13640 267 LFEAAKKAADVANAKgvlsgkPeVSRCIDALSLLM--KIN--ITPKPKEPRRMMDKLEGLTKHK-DR-KICHVASALLHL 340 thale cress
TIGR:At2g33090 157 LFEIAKKSADFANAKgilaseVeTSMCVDTLTLLL--EFP--ISARDMETRKLMVRLEHLTKHK-NR-KICNSASKLLQC 230 thale cress
TIGR:At2g13640  23 LTAAAIKATYNTRNP------CeVERCIDVLNHLK--SLS--LSVKDIRLSESIVKLETLRSHR-NP-RIRKEAQALFHS 90  thale cress
AAB91965        17 LVSTAIRASNSQNASd-------VERCFDVLRYLK--GLN--LSVKNLSHSKVILPLESLRDHE-NP-KIRTEAHVLFTS 83  thale cress
NP_193607       13 ALRAAKSVKGDENSPe-------VSRFVDAMNRLK--EAPksLVCDVVCKTSMGQGLEFFIDHK-NP-KIRSEGRILRDL 81  thale cress
NP_181801      503 ALRAAKSVKGVKNSS------K-VSRFVDARNRLKdaPTS--LACEVVSKTSMGKGLSFLNDHK-NP-HIRSEGRLLRDL 571 thale cress
AAB91965       250 LFEMAKKSADVANAKgflaakEeASICVDILALLM--KFS--IISTAIETRRIMEKLERLTKHK-DR-KICNAALALLHH 323 thale cress
NP_593623        6 IRSAKAALEKAIQ-G------KnIETIINIMTRLKn-EVV--ATEELLKETRLGLVVGKLRSHP-NE-KVGEQAREIVKK 73  Schizosacchar...
XP_001375489    74 LLNNWLTYSKTTNn---------VPLLQQILLTLQ--HLP--LTVDHLKQNNTAKLVKQLSKSSeDE-ELRKLASVLVSD 139 gray short-ta...
1WJT_A          82 WKRLLDS 88  house mouse
TIGR:At2g13640 341 WRQRIRE 347 thale cress
TIGR:At2g33090 231 WRESIRE 237 thale cress
TIGR:At2g13640  91 WLKTFYA 97  thale cress
AAB91965        84 WMKTFYS 90  thale cress
NP_193607       82 WMKFFYA 88  thale cress
NP_181801      572 WMKILYA 578 thale cress
AAB91965       324 WRQTIRN 330 thale cress
NP_593623       74 WKADVSK 80  Schizosaccharomyces pombe 972h-
XP_001375489   140 WMAVIRS 146 gray short-tailed opossum
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