Conserved Protein Domain Family
PPR_3

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pfam13812: PPR_3 
Pentatricopeptide repeat domain
This family matches additional variants of the PPR repeat that were not captured by the model for pfam01535. In the case of the Arabidopsis protein UniProtKB:Q66GI4, the repeated helices in this N-terminal region, of protein-only RNase P (PRORP) enzymes, form the pentatricopeptide repeat (PPR) domain which enhances pre-tRNA binding affinity. PROPRP enzymes process precursor tRNAs in human mitochondria and in all tRNA-using compartments of Arabidopsis thaliana.
Statistics
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PSSM-Id: 316342
Aligned: 7 rows
Threshold Bit Score: 80.0947
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9USP3       117 LILQDADRLGIQFNIVDYTHILRVAMYTGNKHILEYIVARVKEKRIRPSVDYFNAILGVIggN 179 Schizosaccharomyces pombe 972h-
XP_005834930 467 RILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTC--E 527
XP_002174810  92 KIFRDVVRQDVQLSINDCNHLLHLSFLVGNRKLANQIQMYVKKNKLSPNRCYYNSIISLIvgR 154
EIE87115     139 RLKDEMQNKGIELNGVTYIHLLEA--QQGNLQLALEIFKEMKQKGIAPTVLSYSFLIGAC--R 197
1_pfamImport   1 SVVEEMNIRNLRYDLNTYNALLTAYARVKDQKAISETLDRMEKEGIKPTIDTYNYIMKAFgnN 63 
XP_003555285 341 VLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYgdR 403
2_pfamImport   1 SLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYgkM 63 
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