5IFW,5IFS


Conserved Protein Domain Family
UBX2_UBXN9

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cd16118: UBX2_UBXN9 
Ubiquitin regulatory domain X (UBX) 2 found in UBX domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar proteins
UBXN9, also termed tether containing UBX domain for GLUT4 (TUG), or alveolar soft part sarcoma chromosomal region candidate gene 1 protein (ASPSCR1), or alveolar soft part sarcoma locus (ASPL), or renal papillary cell carcinoma protein 17 (RCC17), belongs to the UBXD family of proteins that contains two ubiquitin regulatory domains X (UBX) with a beta-grasp ubiquitin-like fold, but without the C-terminal double glycine motif. UBX domain is typically located at the carboxyl terminus of proteins, and participates broadly in the regulation of protein degradation. In addition, UBXN9 contains an N-terminal ubiquitin-like (Ubl) domain. UBXN9 functions as a cofactor of p97 (also known as VCP or Cdc48), which is a homohexameric AAA ATPase (ATPase associated with a variety of activities) involved in a variety of functions ranging from cell-cycle regulation to membrane fusion and protein degradation. However, high-affinity interacting protein ASPL efficiently promotes p97 hexamer disassembly, resulting in the formation of stable p97:ASPL heterotetramers; the extended UBX domain (eUBX) in ASPL is critical for p97 hexamer disassembly and facilitates the assembly of p97:ASPL heterotetramers.UBXN9 is involved in insulin-stimulated redistribution of the glucose transporter GLUT4, assembly of the Golgi apparatus. In addition to GLUT4, UBXN9 also controls vesicle translocation by interacting with insulin-regulated aminopeptidase (IRAP), a transmembrane aminopeptidase. UBXN9 and its budding yeast ortholog, Ubx4p, are multifunctional proteins that share some, but not all functions. Yeast Ubx4p is important for endoplasmic reticulum-associated protein degradation (ERAD) but UBXN9 appears not to share this function.
Statistics
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PSSM-Id: 340535
Aligned: 39 rows
Threshold Bit Score: 86.0828
Created: 12-Nov-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:putative UBX-p97 interaction site [polypeptide binding site]
Evidence:
  • Comment:High-affinity interacting protein ASPL (alveolar soft part sarcoma locus) efficiently promotes p97 hexamer disassembly, resulting in the formation of stable p97:ASPL heterotetramers; the extended UBX domain (eUBX) in ASPL is critical for p97 hexamer disassembly and facilitates the assembly of p97:ASPL heterotetramers
  • Structure:5IFW: Homo sapiens UBX domain of ASPL binds p97; contacts at 4.0A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         # # ##    ## #                                            ## #                 
5IFW_A        75 VALRVLFPd--RYVLQGFFRPSETVGDLRDFVRShlgn-------------pelSFYLFITPPKTVLDdh--tQTLFQAN 137 human
XP_002126769 406 VIVRVIFPs--RHVLQAMFNPLETMKELYAIVEEhv----------------sqSFYLYTSPPKEILKdk--tVTLFEAG 465 vase tunicate
XP_001770827  86 ATIRVHFPd--GFVVEAVFKSTETIADIMELVRKtitr-------------pdlSFYLYTTPPKRPLKvl--qQNMIDAS 148 Physcomitrella ...
KJE91720     548 TTIRVHFPd--RVQLQAVFRSKETVYDLFTFVAQhlpshlv------pakgepfPFTLHVTPPRRDLSta-mfESLFDAN 618 Capsaspora owcz...
XP_002980306  98 ATLRVQFPd--SIIVEADFSPLDLVLELVTMLEKlllk-------------peiPFHLYTTPPKQILKdy--nVTMYDAG 160 Selaginella moe...
XP_002949610 421 VAIRVHLPg--GPILQLIFAATETVGALRSAVVSalqp------------saaaAAYLYTTPPRQVLRtdqdqHSLYHVG 486 Volvox carteri ...
XP_002769753 369 CVVRVAFPd--RLVLQLQFRPADTLASLYDAVGRflspe-----------ykekEWYLYQTPPMHRIHrd-gkKLLADED 434 Perkinsus marin...
CEG01442     198 AVIRFMAPmpsDLIVEASFSASERVRDLYAFVERcassa-----------dvasKIELFVTPPKRVLArn-deTTLLSAG 265 Ostreococcus tauri
KFM23627     281 VPIRLVLPd--GHCLQAVLKARETTGRLYDLVAAall--------------pglSFHLFVTPPKMLLPrq-dgTSLWKAE 343 Auxenochlorella...
ESS29460     416 CTVRVLLPd--RAVLQLSFAPHKTLRFVREQVQQflhpllrsssggeareecfsRWFLCETPPLRKVEl---hKTLYQEG 490 Toxoplasma gond...
Feature 1          #### # # 
5IFW_A       138 LFPAALVHLGA 148 human
XP_002126769 466 FAPAARVYISA 476 vase tunicate
XP_001770827 149 FTPGANVYFSY 159 Physcomitrella patens
KJE91720     619 LSPTAVVYFSL 629 Capsaspora owczarzaki ATCC 30864
XP_002980306 161 LVPGALVYLSY 171 Selaginella moellendorffii
XP_002949610 487 LVPAAHVYVGL 497 Volvox carteri f. nagariensis
XP_002769753 435 LVPSALIRWGY 445 Perkinsus marinus ATCC 50983
CEG01442     266 MAPASRVRVGV 276 Ostreococcus tauri
KFM23627     344 LLPAARVHVGV 354 Auxenochlorella protothecoides
ESS29460     491 LLPNCTLHLKF 501 Toxoplasma gondii VEG

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