6L77


Conserved Protein Domain Family
protein_MS5

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pfam04776: protein_MS5 
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Protein MS5
Proteins are known only from species of Brassicaceae. Protein MS5 is essential for pairing of homologs during early prophase stage of meiosis but not necessary for the initiation of DNA double-strand breaks.
Statistics
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PSSM-Id: 428116
Aligned: 52 rows
Threshold Bit Score: 126.204
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6L77_A       108 LPDkWPSKEAFaDQSR--FLYKXQKSDWEE-HDWIRLYXEISFFNRDRclDHNX-------Sd------LKILDVVVETE 171
RID75204      88 MPD-WLPDDYAtST-LllQYYEMKESEVEQaKEWLHLYAELALYTKKQ-----TdpfmferSk-----pLELGKVVVQTR 155
NP_001119018 133 MPE-WMPEDALtGR-DklQYYEMKDSELEEeKEWLHLYAELALFSKLHaha-------lesAk-----pFEMKKIVVRTK 198
EFH55540     103 MPN-SMPENTS----DnlQYYELSESEVEEyKDWLHLYVDLASRTKWRcv----------hPspvwretFELRKIIVQTR 167
XP_013667007 140 MPS-WLQDDALtGPNKl-QFHEVKDSELQD-NEWLNLYAEIALSSERPdm---------etYl-----pLEVKKVVVRTK 202
Q9SIU9       168 MPK-WLDDGALsGSEKl-HYYEVNDSDLQE-NKWLHLYAQVGAYSKWDlgm--------vkHf-----pLEIKKVVVQTM 231 thale cress
XP_002875688 182 MPN-FVSKEGAvN--DklRFYEVQEQDICA-NDWLRLYTEFALFSFWR-----YnedgfesCl-----pVEIKKIIVETC 247
XP_002875692 199 MPD-FLSETKLd---DklRFYEVQEQDICE-NDWLRLYTEFALFCFWW-----FnedgfkfSl-----pVEMKKIIVETR 263
XP_002867431 202 LPS-WLTEQELsN--KrgQFYELQESDWQG-NEWLHMYAEFALYSKFF-----AygndlrhFl-----pLEMKKIIVQTQ 267
EFH43689     161 MPN-WLTKEELaAANDkgQYYELQESDLLG-NEWLHLYAEFALSLNWR--GYAMkntilrrFl-----pLKIKKVIVHTR 231
6L77_A       172 eN--VPRETvLKSlRNVLVYIRYDqDLGADg--vCKHIAIVRRTVEPtTHCVCL 221
RID75204     156 g--vVDSLKeVELlDNAVFFITFK-TSCGD-----VWKGIIRRTRDGiPEHLSL 201
NP_001119018 199 a--nVESKKkVKA-ENAIFYTSFR-TRCGR-----DCNCIIRRTTDGkRDHFSL 243
EFH55540     168 a--dVESKKkAKA-ENAIFYMNFK-CICSQ-----DCNAIIRRTTDGlPQHMSL 212
XP_013667007 203 e--dVEPSMkLKS-SNAIFYTIFK-THRGH-----ECKAIIRQTRDGiQGHMCL 247
Q9SIU9       232 eDd-IESNLkLKS-SNAIFYITFT-TSGGV-----ECACIIRQTRNGrPQHMCL 277 thale cress
XP_002875688 248 eTh-REPRLkLKS-SNAIFHINFSak-------sCDYKSVVRRTTDGkPGHIVL 292
XP_002875692 264 eTd-GEPCHkLKS-GNAIFYINFRak-------sRDYRSVVRRTTDGkTGHI-I 307
XP_002867431 268 enreASPHMiLKA-NNAIFYISFK-GNGDPsgtpMEYQAIVRRTMDGmPGHICL 319
EFH43689     232 esgeESPHLkLKA-NNAIFYMSFK-GNSDHps-dVEYQAIVRKTMDGtPGHIRL 282
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