Conserved Protein Domain Family
WCOR413

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pfam05562: WCOR413 
Cold acclimation protein WCOR413
This family consists of several WCOR413-like plant cold acclimation proteins.
Statistics
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PSSM-Id: 398931
Aligned: 18 rows
Threshold Bit Score: 179.093
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q93WS4        11 VTSQA-AAVSLDQDWQAVGEALSNLSSH---ALLAlGLGRTWGDILQWLAVIAAIYLLVLDRTNWRTNLLTALLVPYLAL 86  Physcomitrella ...
XP_002284722  10 RTDTD-TTDLISSDLRDLGNAAKKLATH---AIKL-GGLGFGTTFLEWLASFAAIYLLILDRTNWKTNILTALLIPYIFF 84 
XP_002313824  22 RRDQGmESSLLASDFQDLTNAAKKLANH---AVKL-GGLGFGTTFLEWIAAFAAIYLLILDRTNWKTNILTGLLIPYIFF 97 
XP_006591816   6 gfEEE-AVQLINSDFRDLSLAANRLAHH---AIKL-GGIGFGASFFGLFAAIAAIYLLILDRTNWKTNILTALLIPYIFF 80 
2_pfamImport   1 ---hgtLQAMVGSDLNELATAAKNLANH---TLML-TGLGFGTSILEWIASIAAIYLLVLDRTNWKTNMLTSLLIPYIFF 73 
NP_001334188  11 GSD------MIDSDLKEIGIAAKKLANH---AIML-GGIGFGTSFLKWIASFAAIYLLILDRTNWRSNILTTLLIPYIFL 80 
XP_002866982  10 KTEEN-TANLINSDLNEFVAAAKKLVKD---VGML-GGLGFGTSFLQWAASISAIYLLILDRTNWRTKMLTTLLVPYIFF 84 
XP_006369881  50 FNPLR-----LSIKSNEMMMKIKRKESGrgfGAVChAGS-LTTPSLPWISALSSAVLVLAKGT----AVQKSFLVPLFAL 119
EFH69818      44 FNPLR-----LSGDRQRTSTVSARVEKRr-kSVVCyAAP-ISVDSLQWISTISCLALMLARGT----AIHKSVVVPLFAL 112
XP_024385780  12 tqpGA-AAMAIDQDWHALGAALSNLGMH---LAAAaGITGSSTGLLQWLAVIAAIYLLVLDRTNWRTNLLTALLVPYLAL 87 
Q93WS4        87 QLPGFIFDFLRGNVGLWIAFIAVVIRLFFASQLPQSihgdLELPAAFILLIVTAPKLLVE-YRTSVYAEVISVIIGAYLL 165 Physcomitrella ...
XP_002284722  85 SLPSILFNFFSGQVGKWIAFIAVVLRLFFPKRFPDW----LEMPAALILVIVVAPSLFSStIRGDWIGLVICLAIGCYLL 160
XP_002313824  98 TLPSILFSLLRGDVGKWIAFVAVILRLFFPKRFPDW----LEMPGALILLIVVAPSLFAStIRNNWIGVAICLAIACYLL 173
XP_006591816  81 SLPSLIFDVFRGELGKWIAAVAVVLRLFLPRHFPDW----LELPGALILLIVVAPSLIAStFRDNIVGVVVCLIIACYLL 156
2_pfamImport  74 SLPSVIFGLFRGDVGKWIAFVAVVVQLFFPKHFREW----FELPAALILLIVVAPGLIAGtFRDNWVGLVVCLLIGCYLL 149
NP_001334188  81 SFPSLLFGLFRGDFGKWLSLIAVITRLFFPKHFPDW----LEAPAALVLLMVVSPSFLADtIRDNWIGTFICLVIGCYLL 156
XP_002866982  85 TLPSVIFQFFSGDFGKWIALIAITIRLFFPKEFPDW----LEIPAGLILLIVVAPSLIAWtLRESWVGAVICLVIACYLF 160
XP_006369881 120 QAPPAVISWIKGEYGIWTAFLALLFRLFF--FIPGE----LELPFMALLLVIVAPYQVMN-IRGKQEGAIVGLVIAAYLA 192
EFH69818     113 HAPSSIITWIKGEYGVWAAFLALIARLFF--TFPGE----LELPFIALLLVIVAPYQVMN-IRGKQEGAIISIAISCFLA 185
XP_024385780  88 QLPEVVFDFLRGGIGAWIAFAAVVIRLFFAQSFPNLihgdLELPVAFILLVVTAPKAIVH-FRGHFIGEIVCLVIGAYLL 166
Q93WS4       166 VQHISNAGGCRPAFAESRGVSHTIGIILL 194 Physcomitrella patens
XP_002284722 161 QEHIRASGGFRNSFTQRHGISNSIGLILL 189
XP_002313824 174 QEHIRASGGFRNSFTKAHGISNTVGIILL 202
XP_006591816 157 QEHIRASGGFRNSFTKAHGISNSIGIILL 185
2_pfamImport 150 QEHIRASGGFRNAFTKAHGISNTLGIIAL 178
NP_001334188 157 QEHIRASGGFRNSFTKAHGISNTIGIILL 185
XP_002866982 161 HEHIKASGGFKNSFTQKNGISNTIGIVAL 189
XP_006369881 193 FQHFSRIGNMQRAFEQGSVVA-TIAVVCV 220
EFH69818     186 FQHFSRAGSLEKAYEKGSVLA-TVAIIGV 213
XP_024385780 167 YQHTNHAGGFRRAFAETRGVRHTVGILLL 195
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