3VDY,4DAM,3A5U,3EIV,6CQO,5YUO,2VW9,2CWA,1Z9F


Conserved Protein Domain Family
SSB

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pfam00436: SSB 
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Single-strand binding protein family
This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.
Statistics
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PSSM-Id: 425680
Aligned: 48 rows
Threshold Bit Score: 70.7272
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3VDY_A     5 FNQVMLVGRLTKDPDLRYTS-AGAAVAHVTLAVNRsf-----------knASGEIEADYVNCTLWRK-TAENTALyCQKG 71  Bacillus subtilis
Q9LII1    80 IFKAILVGQVGQLPLQKKLK-SGRTVTLFSVGTGGirnnrrplinedpreYASRSAVQWHRVSVYPErLADLVLKnVEPG 158 thale cress
Q9CLN9     9 DNRFSLIGIVASQPKRHQSP-NGIYHCQFVLEHRSiqe----------eaGLSRQAWCKMPVQMSGN-QFREKTQsITVG 76  Pasteurella multoci...
P73145     1 MNSFVLMATVIREPELRFTKeNQTPVCEFLVEFPG---------------MRDDSPKESLKVVGWGN-LANTIKEtYHPG 64  Synechocystis sp. P...
P34496    54 VNKVELVGGVALDPLYKTGR-NGKPYLIFNIITNSyfk---------qqdGTTLDQTERHAVSVFGK-QAEILSKtIKKG 122 Caenorhabditis elegans
CAA76579  18 fanGQLFGRVGN-VDFKESA-NGTKYVRYSLAVNKf-------------rKGEDSITDWYNITIFDEgELQKAEKaLRVG 82 
6CQO_B     3 FSKXSIVGRIGSEFTEHTSA-NNNRYLKYSIASQP----------------RRDGQTNWYNITVFNEpQINFLTEyVRKG 65  Saccharomyces cerev...
P54622    38 VNTVTILGRVGADPQLRGSQ--EHPVVTFSVATHTnyk---------yenGDWAQRTDWHRVVVFKPnLRDTVLEyLKKG 106 fruit fly
Q9CYR0    30 LNRVQLLGRVGQDPVMRQVE-GKNPVTIFSLATNEmwrsgd---sevyqmGDVSQKTTWHRISVFRPgLRDVAYQyVKKG 105 house mouse
Q84J78    71 VHRAIICGKVGQAPLQKILR-NGRTVTIFTVGTGGmfdqr------lvgaTNQPKPAQWHRIAVHNEvLGSYAVQkLAKN 143 thale cress
3VDY_A    72 SLVGVSGRIQT-RSYENEE-GVNVYVTEVLAD---TVRFM 106 Bacillus subtilis
Q9LII1   159 TVIYLEGNLET-KIFTDPVtGLVRRIREVAIRrngRVVFL 197 thale cress
Q9CLN9    77 SQLLVVGFISS-HKTANGL-S----QLVLHAE---QIEFI 107 Pasteurella multocida subsp. multocida str. Pm70
P73145    65 DRLIIEGRLGM-NMIERQE-GFKEKRAELTAS---RISLV 99  Synechocystis sp. PCC 6803 substr. Kazusa
P34496   123 SRLMVQGRLHYsGGQKDEQgNRTQRNTYIIAQ---TVQPL 159 Caenorhabditis elegans
CAA76579  83 NKMIVDVTLRL-DKFEDPEtKKVQTRTSLIQK---HAEiv 118
6CQO_B    66 ALVYVEADAAN-YVFERDD-GSKGTTLSLVQK---DINLL 100 Saccharomyces cerevisiae S288C
P54622   107 QRTMVQGKITY-GEITDQQ-GNQKTSTSIIAD---DVLFF 141 fruit fly
Q9CYR0   106 ARIFVEGKVDY-GEYMDKN-NVRRQATTIIAG-----KKL 138 house mouse
Q84J78   144 SSVYVEGDIET-RVYNDSIsSEVKSIPEICVR------RD 176 thale cress
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