Conserved Protein Domain Family
COG5593

?
COG5593: COG5593 
Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis]
Statistics
?
PSSM-Id: 227880
Aligned: 3 rows
Threshold Bit Score: 620.906
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6225679   173 EANLSSdqEPEsESAEKEKKEEKDGGLITQTTIISSDkliiPyDKPWYEIPLdPQVgqNDDVEELSKEQIEKLFERGKQT 252  baker's yeast
19073990    1 ------------MGKSKSGNREKRASKGKRPSGKGGG------------------------ASRKK------LEKKKIVL 38   Encephalitozoon c...
6226443     1 MATLYP--KPK-RGQKIIFNEEGEGTIDTKPQGVMFD----P-GVPWYNIPL-PEL--HEDKKFVNVDHVSELETRGLLL 69   fission yeast
6225679   253 LEADNQTYYEEFTKDSSQAKFMSQILSDGTLNDKISAVTLLIQDSPLHNTKSLETLVSYCGKKSRNSALQSLNALKDLFL 332  baker's yeast
19073990   39 KRRPCPIQGREFPDAT---KIEKDLLMHGTVKDRVDVLTLLVGRNPS--AENYKNLLAFCENQRNDVHYYVLKNIKDLLI 113  Encephalitozoon c...
6226443    70 LKEDSERFSETLGHGTADKRMLQTLISSGTTSDRISALTLLVQESPIHAVKALETLLSICSKKSRNEATQAITTLKDLFI 149  fission yeast
6225679   333 NGLLPNRKLRYFKNQPGL-SMMLNKKTLAIFYFEDYLKKLFFRVLEVLEVLSHDPIIHVRLQILNHVFDLLTNQPEQEFN 411  baker's yeast
19073990  114 S----------------K--KEVQNPYIKQRIVKSFAANLRN--------------QYIKKKVVRLVYKLLEAR-VLFVD 160  Encephalitozoon c...
6226443   150 GGLLPDRKLKYMKQQSCLgSKNVTDKHLMVWAFESFLKSFYFKYIQIIEALSFDALLFVKSQMVSTIYDLLKAKPEQEQN 229  fission yeast
6225679   412 LLRLGVNKIGDIDSKVSSKASYLLLKLEQAHPNMKSIVIDAIVDIALRPNADYHTTYYSVITLNQTILKRSEDSVANKLV 491  baker's yeast
19073990  161 LIHLFINKLGDKRD----MSDYVIDKLHLLVPGNEEVVLDGVEDFYFK-NDLFRSRHVALRFLARLECENREKAFG---- 231  Encephalitozoon c...
6226443   230 LLKLLINKLGDKENKIASKASYSILQLEASHPAMKLVITKEIERFIFAPSTSRTSCYYTLITLNQTVLTHKQVDVANLLI 309  fission yeast
6225679   492 KTYFTLFEKFLINTDKDNTngvVksNSKSYEEKRKKNFKKGKHGGKSVKIEKTENEVLDEKNSKLFSALLTGINRAFPFA 571  baker's yeast
19073990  232 -VFNSILRDFNENIPEEHR--------NILLEDLVIGLGKNMGSEKICRTDIIRKAVHTEKMTFYGCKVLFGC-RDGGVL 301  Encephalitozoon c...
6226443   310 EIYFVFFTKLLFALEKEEV---A--DAPTLEKKSLQSDSKNKKSQKRKKDEDLRKEAEENVNSRVISAVLTGVNRAYPFA 384  fission yeast
6225679   572 QIPASVYEVHMETLFKITHSSNFNTSIQALVLINQVTVKAKLNSDRYYRTLYESLFDPRLVNSSKQGIYLNLLYKSLKQD 651  baker's yeast
19073990  302 LLFRNAVKSHKMRNSKYLPEFLNMVHEAASMHKDREFYRFLLDTSLLYTPEYIISILIICSEARKDGIDGFDNIHSLRVL 381  Encephalitozoon c...
6226443   385 EVNSEKFDKHMNTLFAITHTASFNTSVQVLMLIFQASASRDFISDRYYKSLYESLLDPRLTTSSKQSLYLNLLYKSLIID 464  fission yeast
6225679   652 AlNVERVEAFVKRILQVCSHWLNVGTITGFFFLLIQLAKTVPQIKNLLTNTPV-DYEY----------ESDAEEEQ---G 717  baker's yeast
19073990  382 T--VHYHDVVRRFALQLISGEMVLPFDPFDNMSLLSAEMACGDL------------------------------------ 423  Encephalitozoon c...
6226443   465 N-NIPRVRAFIKRMVQV-SAWQQPPLVTGLFHVMHQLVIATTALRSMFTNAEIhDFDGdeeevfkdveEDDVSEDQkvdS 542  fission yeast
6225679   718 DKDIK-------------------RKE---YDGRKRDPKFANAEKSSLWEINNFINHFHPTVKTYANAYVTGEtEQIAKP 775  baker's yeast
19073990      --------------------------------------------------------------------------------      Encephalitozoon c...
6226443   543 DKDGKlsdkqshsayvvgnvsvstKKEhlsYDGRKRDPQYSNADGSCLWEIHPFLNHFHPTVSLLAKSLVYGE-KILGKP 621  fission yeast
6225679   776 DLGLFTLSHFLDRFVYRSAKQTNTARGTSIMQPLFSGsrVNDSvLVKASdiMHDQGPVNTEDWLTKKVEDIKPEDKFFYQ 855  baker's yeast
19073990      --------------------------------------------------------------------------------      Encephalitozoon c...
6226443   622 NLSLHTLNHFLDKFAYRNPKKSAAARGHSIMQPLAGG--LSKG-YVPGS--TYSGVPMNSEQFTSKKQEEIPVDELFFYR 696  fission yeast
6225679   856 YFTtKKTADGKGKKSNKASnFDSDDEMDENEIWSALVKSRPDVEDDSDDSELDFAEDD--FSDSTSDDEPKLDAIDDEDA 933  baker's yeast
19073990      --------------------------------------------------------------------------------      Encephalitozoon c...
6226443   697 FFN-DKYIKGKQARKTKVD-RDEEGEIDEDEVWKALVDSKPQLEMDEEESDFDSEEMDkaMTDMGSDSEQSADENDNESM 774  fission yeast
6225679   934 KSEGSQESDQEEGLDEdIFYSFDGEQDNSDkkrSFAESSEEDESSEEEKEEE-ENKEVSAKRAKKKQRKNMLKSLPVFAS 1012 baker's yeast
19073990      --------------------------------------------------------------------------------      Encephalitozoon c...
6226443   775 ASEEKPMFSDEENLSE-IAHSEDEFDDTVD---FFEDENDLLPFNETDDEEEiQTVDHSETHSHKKKKRKAIKDLPVFAD 850  fission yeast
6225679  1013 ADDYAQYLDQ 1022 baker's yeast
19073990      ----------      Encephalitozoon cuniculi
6226443   851 AESYAHLLEN 860  fission yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap