Conserved Protein Domain Family
TYA

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pfam01021: TYA 
TYA transposon protein
Ty are yeast transposons. A 5.7kb transcript codes for p3 a fusion protein of TYA and TYB. The TYA protein is analogous to the gag protein of retroviruses. TYA a is cleaved to form 46kd protein which can form mature virion like particles.
Statistics
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PSSM-Id: 425992
Aligned: 6 rows
Threshold Bit Score: 609.651
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q03964         17 ACASVTSKEVQTTQDPLDISASKTEECEKVFTQANSQQPTTPPSAAVPENHHHASPQAAQVPLPQNGPYPQQRMMTPQQA 96   Saccharomyces...
Q12112         17 ACASVTSKEVHTNQDPLDVSASKIQEYDKASTKANSQQTTTPASSAVPENPHHASPQTAQSHSPQNGPYQQQCMMTQNQA 96   Saccharomyces...
O74302         17 ACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQA 96   Saccharomyces...
1_pfamImport    1 ACASVTSKEVHTNQDPLDVSASKINEYDKLSTKANSQQETTPVPTDVSENIHHASPHTAQVPLPQNGPYSQQCMMTQNQA 80  
2_pfamImport    1 ACASVTSRGV---QDPLVAPAFQLQESDEDSNKVKSQSTTTPGSSAVPDNHPRAFPQPAS--------HSQRSMTTPSQT 69  
P0C2J3         17 AYASVTSKEVPSNQDPLAVSASNLPEFDRDSTKVNSQQETTPGTSAVPENHHHVSPQPASVPPPQNGQYQQHGMMTPNKA 96   Saccharomyces...
Q03964         97 NISGWPVYGHPSLMPYPPYQMSPMYAPPGAQSQFTQYPQYVGTHLNTPSPESGNSFPDSSSAKSNMTSTNQHVRPPPILT 176  Saccharomyces...
Q12112         97 NPSGWSFYGRPSMIPYTPYQMSPMYFPPGPHSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLT 176  Saccharomyces...
O74302         97 NPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLT 176  Saccharomyces...
1_pfamImport   81 NPSGWPAYGHPYTMPYTPYQMSPMYYPPGPQPQYPQYTSTTGTPLSATPPEPSNTLTKPPSTKSDVTPVNKSVRPPPILT 160 
2_pfamImport   70 TTFGRTFYGHPSTMPYSPYQMSPMYFPSGTQALFLQYPPSFGSPLNAPSPE------------SDTTLTYNPVRPPPILT 137 
P0C2J3         97 MASNWAHYQQPSMMTCSHYQTSPAYYQPDPHYPLPQYIP----PLSTSSPDPIDLKNQHSEIPQAKTKVGNNVLPPHTLT 172  Saccharomyces...
Q03964        177 SPNDFLNWVKIYIKFLQNSNLGDIIPTATRKAVRQMTDDELTFLCHTFQLFALSQFLPTWVKDILSVDYTDIMKILSKSI 256  Saccharomyces...
Q12112        177 SPNDFLNWVKTYIKFLQNSNLGDIIPTATRKAVRQMTDDELTFLCHTFQLFAPSQFLPTWVKDILSADYTDIMKILSKSI 256  Saccharomyces...
O74302        177 SPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSI 256  Saccharomyces...
1_pfamImport  161 SSNDFLNWIKTYVKFLQNSNLGDIIPTTDGRPIRQITYDEHTFLYNTFQTFAPSHFLPTWVKDILSVDYTDIMKVLSKSF 240 
2_pfamImport  138 SAKDFLNWVRFYIKFLQNSNLGDILPSATEKAVRQMTNEEHAFLYNTFRVFAPLQFLPIWVKQILYNDYTDIMKILSKSM 217 
P0C2J3        173 SEENFSTWVKFYIRFLKNSNLGDIIPNDQGEIKRQMTYEEHAYIYNTFQAFAPFHLLPTWVKQILEINYADILTVLCKSV 252  Saccharomyces...
Q03964        257 NKMQSDTQEVNDITTLANLHYNGSTPADAFEAEVTNILDRLKNNGIPINNKVACQFIMRGLSGEYKFLRYARHRYIHMTV 336  Saccharomyces...
Q12112        257 NKMQSDTQEVNDITTLATLHYNGSTPADAFEAEVTNILDRLNNNGIPINNKVACQFIMRGLSGEYKFLRYARHRYIHMTV 336  Saccharomyces...
O74302        257 EKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTV 336  Saccharomyces...
1_pfamImport  241 EKMQSDNQDVHDLITITNLRYNGSTPAGEFETKITNTIERLNNNGVSINDKLACKLIMRGLSGEYRFLRYTRHRHQNMTV 320 
2_pfamImport  218 ERMQFDTQEVTDLVALTTLKYNGSTPVDTFETTVTNIIERLNNSGININDKVACQLILKGLSGEYKYVRSTSHCRKNRTV 297 
P0C2J3        253 SKMQTNNQELKDWIALANLEYDGSTSADTFEITVSTIIQRLKENNINVSDRLACQLILKGLSGDFKYLRNQYRTKTNMKL 332  Saccharomyces...
Q03964        337 ADLFSDIHSMYEEQQESKRNKSTYRRSPSDEKKDSRTYTNTTKPKSITRNSQKPNNSQSRTARA 400  Saccharomyces cerevisiae S288C
Q12112        337 ADLFSDIHSMYEEQQESKRNKSTYRRNPSDEKKDSRTYTNTTKPKSITRNSQKPNNSQSRTARA 400  Saccharomyces cerevisiae S288C
O74302        337 AELFLDIHAIYEEQQGSRNSKPNYRRNPSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARA 400  Saccharomyces cerevisiae S288C
1_pfamImport  321 AELFLDIHAIYEEQQESERRKPTYPRIPKDDKNISRVSPNINKAKTVTRNPQKASNSKSRTVKT 384 
2_pfamImport  298 SDLFSDIHAVYDNQQYSKQSELTYTKNRSHCKNASRSTSTTPNTNVVTRSSRTTNTSKSRKTKA 361 
P0C2J3        333 SQLFAEIQLIYDENKIMNLNKPSQYKQHSEYKNVSRTSPNTTNTKVTTRNYHRTNSSKPRAAKA 396  Saccharomyces cerevisiae S288C
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