1KNG


Conserved Protein Domain Family
TlpA_like_DsbE

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cd03010: TlpA_like_DsbE 
Click on image for an interactive view with Cn3D
TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c maturation (Ccm) factor with a redox active CXXC motif. Assembly of cytochrome c requires the ligation of heme to reduced thiols of the apocytochrome. In bacteria, this assembly occurs in the periplasm. The reductase activity of DsbE in the oxidizing environment of the periplasm is crucial in the maturation of cytochrome c.
Statistics
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PSSM-Id: 239308
Aligned: 40 rows
Threshold Bit Score: 169.295
Created: 30-Mar-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic residues [active site]
Evidence:
  • Comment:CXXC motif
  • Comment:The active site of DsbE is unusually acidic for a thioredoxin-like oxidoreductase.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                  #  #                                 
1KNG_A       12 RPAPQTALPPLEglqadnvqvPGLDPAAFk-gKVSLVNVWASWCVPCHDEAPLLTELGKDkrfQLVGINYKDAADNARRF 90  Bradyrhizobium j...
YP_129476    38 RPVPEFTLPSLQqe------lDSITQASLk-gDVQLLNVWASWCSICKSEHAYLQQLAAEqslSIIGLNYRDERKAALNE 110 Photobacterium p...
P44943       39 KPVPEFYQANLHep------sQIVSPKEFp-kQPFLLNVWGSWCGYCKEEHPLLIEIAKTl--PIVGVDYRDNRQNGIKM 109 Haemophilus infl...
NP_934048    40 IPLPNIDAKDLFs-------aNTITTQELisdQYRVMNVWASWCGICRDEHTFIMSLKQQg-iDVIGLNYRDNKQEALGY 111 Vibrio vulnificu...
YP_204932    39 ETVPAFKLSDVTda------sTYLTESIFhndSLTLLNVWAAWCGICKTEHQFLHQLKEQg-iPIIGLDYRDNRSAAKQV 111 Vibrio fischeri ...
AAP95546     39 KPFPEFVGKNLLdq------hTYIDNDSLp-kEPYILNIWGSWCGWCIKEFPVLHKLKQQg-vQIVGLTYADHPDNARKA 110 Haemophilus ducr...
ZP_00056250  38 RPVPEMSLAPLPgrg----dtSGLATENLk-gRVSLVNIYGSWCISCVQEHPILMEIKKRgdaPIHAVDWRDDPVLGAAW 112 Magnetospirillum...
NP_798303    41 LMVPNFSAVSVIs-------gKEVTQVLFqdnGYKLLNVWASWCGICKKEHETLLQIADAg-vPIIGLNYRDNNSAAQNY 112 Vibrio parahaemo...
YP_180554    31 DVSNRIVLPLLYte------dKLFDTNELi-gHPYILNVFASWCTTCQEEHGILLDIAKKqmiKIYGINYLDTEYKVKEW 103 Ehrlichia rumina...
YP_153549    51 KPSYHITLPAIVgt------eKEFRTENIe--GAYVIHVFASWCATCLEEHKIWMSIANEkpiRVYGVAYLDVQHKTLEW 122 Anaplasma margin...
Feature 1                                                              
1KNG_A       91 LGRYGNPFGRVGVD-ANGRASIEWGVYGVPETFVVGREGTIVYKLVGpitPDNLR 144 Bradyrhizobium japonicum
YP_129476   111 LAQTGNPYKKVIYD-PKGSLALDLGVYGTPETYLIDKSGIIRHRYVGaltPTVWE 164 Photobacterium profundum SS9
P44943      110 LKRMGNPFILTIDD-SHGELGLKLGVDGAPETYLVDENGVIRYRHSGlldKETWQ 163 Haemophilus influenzae
NP_934048   112 LESEGNPYSKVIYD-PDGIVSIDFGVIGTPETYLINPNGEIMIKFRGkldQKQWN 165 Vibrio vulnificus YJ016
YP_204932   112 LEQTGNPYQAVLYD-PQGILAMDLGVYGTPTTFVIDQHGKILHRFTGalnEEKWQ 165 Vibrio fischeri ES114
AAP95546    111 LAEWGNPFSLVIDDyDEGFLIQTLRVSSAPSSYLIDKNGIVRYQQKGy-nPDFEQ 164 Haemophilus ducreyi 35000HP
ZP_00056250 113 LKKNGDPYERVGIDpPPGRTAVDFGVTGAPESFIVDKAGIIRYKHVGpisREIWA 167 Magnetospirillum magnetotacticum MS-1
NP_798303   113 LSSKNNPYQDVISD-PNGELAVELGVIGTPETYLIDQNGKVLIKYRGaitIDKWN 166 Vibrio parahaemolyticus RIMD 2210633
YP_180554   104 LKTNGNPYTEIAKD-YSGKVNSALGVTGVPETFIFDQHGKLILHIHGnlpENIWE 157 Ehrlichia ruminantium str. Welgevonden
YP_153549   123 LAKHGNPYAMVAAD-YSGRVMKKLGVTGVPETLVFSRTGEMVMHVSGamtEDLWK 176 Anaplasma marginale str. St. Maries

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