Conserved Protein Domain Family
SseC

?
COG5613: SseC 
Type III secretion system effector SseC (host membrane pore formation) [Intracellular trafficking, secretion, and vesicular transport]
Statistics
?
PSSM-Id: 444344
Aligned: 11 rows
Threshold Bit Score: 243.956
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_011136124   1 MP------------------GAGLPADWAEKEEG---KSGAARKV-Gdavkmvsrp----laevqsqqlGQLASPRAAKE 54 
NP_250399     11 LPygvadagd--ipalgrpvARDVESLRVERLAAp--AAASASGT-G----------------------VALTPPSAASQ 63 
NP_460365      1 ---------------mnrihSNSDSAAGVTALTHhhlSNVSCVSS-Gslgkrqhr---------vnstfgdgNAACLLSG 55 
NP_395163     11 TPvtgsllp-----yvetpaPAPLQTQQVAGELKd--KNGGVSSQ-G----------------------VQLPAPLAVVA 60 
WP_015870347  11 TPp----------------lGSSGQSDRVQQQEEqp--------pvGsgaldlqhpliqhhqgqgqdhrGGFQRPPAPRQ 66 
YP_009150      1 ---------------------------------------MSALTV-G-----------------------GLSGTTGVGD 17 
NP_798036     11 TQvyipesgqttlenvqktaSTATPSVTVENVKS---RDADTLNT-Grv-------------------kVQLDAPNAAVS 67 
WP_011147897  11 QPvvnsspvg---eilattpSKSAEHVTPSQAGSs--LSSDAAKSrG----------------------VSLPAPLTVVN 63 
WP_005320780  11 SPlgntgdv-----aglvpvTQPRSETRLDAATVq--VTGQASKS-G----------------------VSLNAPLMVSN 60 
WP_038480584   1 ----------------mqinGAPTASDEVFHRPLtarVQTPHITS-Galgehlha----------lalfadeDKGVKRWG 53 
WP_082790842   1 ------------mrssiqidGVPDVKTEFDATLHhiaVQTASTSC-Galghrlsa----------thgfneeRYSLKENQ 57 
WP_011136124  55 PVSRQQAADALGRIMGTIDqasGSDGAA-KVPa-----FSLSEIEKIPMDSMIMASTLMTSQMLGDTAAVKSKALDimst 128
NP_250399     64 QRLEVANRAEIASLVQAVG---EDVGLArQVVla--gaSTLLSAGLMSPQAFEIELAKITGEVENQQKKLKLTEIE---- 134
NP_460365     56 KISLQEASNALKQLLDAVPgnh--------------krPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLErate 121
NP_395163     61 SQVTEGQQQEVTKLLESVTrgaAGSQLIsn------yvSVLTKFTLASPDTFEIELGKLVSNLEEVRKDIKIADIQ---- 130
WP_015870347  67 PVTLRLAEAALNRILAIFGp--RVDGHP----------LTVSDIERTPMDAMVLAASLLGVKALGDNANLKALALKireq 134
YP_009150     18 ISLDPTPRFRITTGATLPPapgGADGTS-KADl-----PVLAPPM--GGLALETLMSALGNAERRQACKNGVDQIK---- 85 
NP_798036     68 DKVTDLTLKAMAQLQKIVDtiaKALHAVadq-----tgSIAVKIIAGSADDFEVELAAITDKLKSAQNELKIQEVK---- 138
WP_011147897  64 THPDQEQMARLKSVMQEAK---QATGLIkELTakltatSWLTSLVLHSLEEIEINLGELTSKLDRIQTSLKIQDIQ---- 136
WP_005320780  61 SQVSAQQLGEIGKLVTSVN---ENTRLIlp------htTGLVTAAFTSPEAFEIELGKLTSDLEKTQTKLKLDDIR---- 127
WP_038480584  54 GVSLQEADNALRTLMGAHSega--------------krPTVRDVLEMDPMMLSMMMTQLVLKVSGNNANALCQQLErate 119
WP_082790842  58 YVSQQQAEAALQQLIGTGAaga--------------rnPTIRDVLEMDPMVLSMMMTQLVLNNSGNTASSICKQLErate 123
WP_011136124 129 KQEALRKKEVENIREQMNKAIEQQDKAKKAGILSVVFDWVVAAVEVVTGVAKMIGGvmtgnvMQAAGGAMDLVAGMAGLV 208
NP_250399    135 QARKQNLQKMEDNQQKIRESEEAAKEAQKSGLAAKIFGWISAIASIIVGAIMVATG------VGAAAGALMIAGGVMGVV 208
NP_460365    122 VQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGflsgnpAEMASGVAYMAAGCAGMV 201
NP_395163    131 RLHEQNMKKIEENQEKIKETEENAKQVKKSGIASKIFGWLSAIASVIVGAIMVASG------VGAVAGAMMVASGVIGMA 204
WP_015870347 135 GAENLRLRQNEDLRKQVDKAVEDQAKAQKAGIFSAIVDWIVSIAEVVSGIGKLLIG-------DFAGGAMDVAAGCSGLV 207
YP_009150     86 SKAADQAKINEERLEQISKRLEDMRSKSVLNGFLKAFKIIGMIVGAIASIATTVVG-------ALTGNPLLVAAGVMGMA 158
NP_798036    139 VAKAKHEQEMAENQEKIKESEAAAKEAQKSGLAAKIFGWISAVVSIVVGAIMVATG------VGAAAGALMIAGGVMGAV 212
WP_011147897 137 RARQQSLQKMEENQQKIKEAENSAKEAQKSGLFSKIFGWISAITSIVIGAIMVATG------VGAVAGALLIVGGVMGVV 210
WP_005320780 128 QARTLNEKKIGENQAKIKEAEDSAQEAKKAGIFSKVFGWLSAIASLVIGAIMVATG------IGAVAGALMIASGVVGVV 201
WP_038480584 120 VQAALRNKQVAEYQEQINKAIEQADQARKAGIFSAVFDWIISGVEAVVGVLKMVEGvltadpLAIADGAAYFSAGVAGMV 199
WP_082790842 124 LQAELRNKQVAEYQEQINKAVEQADQARKAGLISAVFDWIIGGVEAVIGVLKIVEGfvtadpLTMADGAAYLAAGVAGMV 203
WP_011136124 209 KAMANTm-ALIDPenaEKYQKV-ADIA----------GKIQLSFEIAGAVVDVTSAArNLLVTKMIPKVAGKVLKEGAeQ 276
NP_250399    209 SQSVQQ--AAADG---LISKEV-MEKL----------GPALMGIEMAVALLAAVVSF-GGSAVGGLARLGAKIGGKAA-E 270
NP_460365    202 KAGAET--AMMCGadhDTCQAI-IDVT----------SKIQFGCEAVALALDVFQIGrAFMATRGLSGAAAKVLDSGFgE 268
NP_395163    205 NMAVKQ--AAEDG---LISQEA-MKIL----------GPILTAIEVALTVVSTVMTF-GGSALKCLANIGAKLG-----A 262
WP_015870347 208 KAACETl-ALIDKdhaDKYQAI-ADVA----------GKVQLAFELAGMVVDLVSVGrGVMAGKSIAKAAETAMEGAAgE 275
YP_009150    159 MTLDAVlsTATDGk-iSFMSGM-TELGkamgmsdeaaKWFGFGMQMAVTLVAV-----GLSLGAGFANVSSSAA-----N 226
NP_798036    213 SMALQEp-AVQDA---LKEAGVnVDVL----------NKVVMALEIAVAVIGAIVTF-GGAAAGGIAKLAAKSASKIA-Q 276
WP_011147897 211 SQGLQQ--AAQDG---LISKET-MKWL----------GPVITAIEITMAVAAAAVSF-GGSAAGLIAKMGAKMGSKVA-E 272
WP_005320780 202 NMAVQQ--AAADG---LISKEV-MEKL----------GPALMGIEIAFAVMSAIASF-GPLIGRAMTSLASKVGGKVA-D 263
WP_038480584 200 KAGAET--ALLLGadkSVCNDI-INAA----------GTVQTACEGVALALDIMQIGrGISAARAITKATEEVLDSGVgK 266
WP_082790842 204 KAGAET--AIALGadkDTCNEI-IKVA----------GIVQNACEGVALALDIMQIGrGIGAARAVTKAAGDVLEKEVgT 270
WP_011136124 277 MVSTAIKKGTAGAAKNAANAvgkqvadqvatqvaqalgkaavdaakattkk--tvekfaqkftnqmlerftheaiekmvs 354
NP_250399    271 MTASLASKVADLGGKFGSLA------------------------------------------------------------ 290
NP_460365    269 EVVERMVGAGEAEIEELAEKfgeevsesfskqfepleremamanemaeeaa-efsrnvennmtrsagksftkegvkamak 347
NP_395163    263 NTASLVAKGAEFSAKVAQIStgisntvgsa--------------------------------------------vtklgg 298
WP_015870347 276 ALHNAVTEGSEEAIKAAAKEigkevagqvseevirnlaeqsgrf----------------lgqgpllkalskeaiekmvt 339
YP_009150    227 LSTTAATKALDFAIKAQQIG------------------------------------------------------------ 246
NP_798036    277 KVTDIATKAAANMAKVADMGsk---------------------------------------------------------- 298
WP_011147897 273 MTAKMAVKAAEFSAKAAGTA------------------------------------------------------------ 292
WP_005320780 264 VAAKIAAKAGEMTAKVGEMAak---------------------------------------------------------- 285
WP_038480584 267 ALIDAVAKGAESELKTLAEKagqevsrvmgkdfgmaleremvevgdmaieaaaheleaesnmvrgisksftregvaklve 346
WP_082790842 271 QLIEAVAKGAEDELKVLADKigqevgrmlgedfgmaveremvevgdmaieaaahsaeaeanmvtrmgksftragvetlvk 350
WP_011136124 355 ksvEKVIKKAVKEGveltaqevtkrvvnqvfadvvkatikatlkapaLVVSSTVRGVAAGAKEIMVGEIEKQRAKLQKEI 434
NP_250399    291 ---GQSLSHSLKLG---------------------------------VQVSDLTLDVANGAAQATHSGFQAKAANRQADV 334
NP_460365    348 eaaKEALEKCVQEGgkfllkkfrnkvlfn----mfkkilyallrdcsFKGLQAIRCATEGASQMNTGMVNTEKAKIEKKI 423
NP_395163    299 sfaGLTMSHAIRTG---------------------------------SQATQVAVGVGSGITQTINNKKQADLQHNNADL 345
WP_015870347 340 qavETAVKNALKSGgdislealtkqvvkevqravikaiigacitsvaNNAKSTTRATLQGTNGIYQGVITKERAELQKVI 419
YP_009150    247 ------------------------------------------------QFVNAGVAVAQGSGAIAGAVIDYRIASSQADS 278
NP_798036    299 --aATTTAKAIRYG---------------------------------AETVDLTVNIGKGATDSVHAANNANVTEIQADI 343
WP_011147897 293 ---ANTTSRGLRVA---------------------------------MQVGDSGVDVTNGAAQTTNAAFQSKAANRQADV 336
WP_005320780 286 -fgAKATVEAVKLTgqtak-----------------------iaqvvTQATDIIIDVSSGAAKSAQSAKESESLSAQADL 341
WP_038480584 347 taiEGAGKDLLKKSeevvakklrdailqk----lrrsivktvisdctHKALLITRATAGGANRISASIVAATSAKLQRDI 422
WP_082790842 351 tavEKAGKELLNKGeeivaeklrdtilke----lrqsiistiirdcsSKALIITRSCVGGANKISLSVVGIRTAELQRTI 426
WP_011136124 435 DLLILDQQWLQSFFefyeQEKKEVIKKTRELLDSKSQVIDDGLQamsqaasTQAQIASSMV 495
NP_250399    335 QESRADLTTLQGVI----ERLKEELSRMLEAFQEIMERIFAMLQ-------AKGETLHNLS 384
NP_460365    424 EQLITQQRFLDFIMqqteNQKKIEQKRLEELYKGSGAALRDVLDtidhyssVQARIAGYRA 484
NP_395163    346 ALNKADMAALQSII----DRLKEELSHLSESHQQVMELIFQMIN-------AKGDMLHNLA 395
WP_015870347 420 QQLMNESSFLQFMLdefeKVKKNAQENISNLMDGAGKALSSAADaqqksgaMLSSIAANIA 480
YP_009150    279 KELEAILERIREAIdfehDFLEAEMKRAEELMGKVGEIVKDCAE-------AQTAILGGTP 332
NP_798036    344 TDLRAKMTLSQAVI----DKLKEEIGKLMEDFQELMSIIMQMIQ-------AKSETMQTVL 393
WP_011147897 337 QLSRSELTAFQAVM----DRLKEELSHLVESFQNVMEMIFQMLN-------ARGDMINNLA 386
WP_005320780 342 AMSKSEMTELQGVI----DKLKEAIAQMIEAFQQTMEMIFQLIN-------AKGDMMNNLA 391
WP_038480584 423 ERLIVQQGYIDFMQnwteDRKKTQQKRLNEAYQDGANALRIASEiidnsgtVLANIAGQRA 483
WP_082790842 427 EKLIVQQGFIDFMQswteDRKKTQQKRLNEAYQDGANAMRSASDmidncgtVLANIAGARA 487
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap