Conserved Protein Domain Family
YtcJ_like

?
cd01300: YtcJ_like 
YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for phytochrome A signalling.
Statistics
?
PSSM-Id: 238625
Aligned: 57 rows
Threshold Bit Score: 302.306
Created: 6-Mar-2002
Updated: 18-Apr-2023
Structure
?
Aligned Rows:
 
active site
Feature 1:active site [active site]
Evidence:
  • Comment:active site is based on homology to other members of the amidohydrolase family

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                  # #                                  
BAB64699     57 AMAELKGRHTME----------------LNLSGNVVLPGFIDSHVHFIdggl---qlarVPLRGVTSkddfinrvk--ea 115 Japanese rice
NP_435449    59 AIAIKDGLFLEVgsdsevmalagsgtkiVDLKGKGVLPGLIDNHTHVVrggln--ynmeLRWDGVRSladamdmlk--rq 134 Sinorhizobium me...
ZP_00095026  48 ALAVHDGVIVAVgttadaea-klpgarrIDLKGAAVMPGLVDSHVHVTfagl---eqfaCRIRPGAMareiaetvk--gc 121 Novosphingobium ...
NP_716619    48 SLAIKDGKIVYIgdeqnamnhvsnktqvIDLKGGYLLPGFVDNHNHVFeaaseigsdclLDEDKDINgyirslra----c 123 Shewanella oneid...
NP_523018    51 AVAVRDGRFVAIgsdaevaqlvgpatqvVDLHGAMVVPGLSDVHAHPLegay----ealYHCALAPTgdldavlaavgac 126 Ralstonia solana...
NP_700325    36 AVAISGGRILAVgstaeieayrtgetevVDLGGRMAMPGFVDVHNHIMmggq----adlFETQLPAGasvddicahvrrq 111 Brucella suis 1330
NP_518360    24 AVAVRDGRFVAVgddatamaqrgpatrvIDLRGRTVIPGLNDSHLHLIrggln--ynleLHWEGVPSladalrmlr--eq 99  Ralstonia solana...
ZP_00088639  68 AVAVKDGRFLAVgsdieamalrgaatrvIDLQRRTVIPGLNDSHLHLIrggln--ynleLRWEGVPSladalrmlk--eq 143 Azotobacter vine...
NP_456060    54 ALAISGSRIVAIgddtatnewrgdhtrtIDLQGKTVIPGLTDTHIHAIrggq----twtFETYWYDSpslkdaldklrad 129 Salmonella enter...
AAM48633     67 ALAVRGDTIVYVgdsaglapfidnetqlISIGDGLLIPGLMDSHTHVFngsf---advgVNLSLADTreklqlal---et 140 uncultured prote...
Feature 1                                                                                       
BAB64699    116 vkdkhpGQWIF-GGGWNndfwgg--dyptaaWLDDIspDNPVWLSRmdgHMGIANSLAMRmaGINKNTNNPVGGtimr-- 190 Japanese rice
NP_435449   135 vaitpaPQWVRvVGGFTehqfaek-rlptieEINAVapDTPVFLLHl-yDRALLNGAALRavGYTRDTPNPPGGeitr-- 210 Sinorhizobium me...
ZP_00095026 122 vakakpGEWIN-GGNWVaagfrk--geqnkaFLDRLapANPVVLVDeshHSLWVNSAALRaaGITRQTPDPAGGvidr-- 196 Novosphingobium ...
NP_716619   124 keeleeGEWLL-GYGHElsqlmqdndtsplaILDEIfpNNPVIIMEqtsHSMWVNSLALAeaGITIHSKEPQGGkilk-- 200 Shewanella oneid...
NP_523018   127 aaraqpDDWIV-GGPWSsallgaletpeslaALDRAskGLPVLLRDdtfHNRWANSVVLQraGIGPGAAAPAGGayv--- 202 Ralstonia solana...
NP_700325   112 aeaavpGQWII-ANQWGadmitalnseaslaKLDAAslGHPVLLRDetmHNRWVNSVALQmcGIANDQPDPPAGsfgr-- 188 Brucella suis 1330
NP_518360   100 aartpsPQWVRvVGGWTefqfaer-rmptldELNQAapDTPVFVLHl-yDRALLNRAALRqvGYTRDTPNPPGGeiqr-- 175 Ralstonia solana...
ZP_00088639 144 aertpaPQWVRvVGGWTefqfaek-rmptldELNRAapDTPVFVLHl-yDRALLNRAALEvvGYTRDTPNPPGGeiqr-- 219 Azotobacter vine...
NP_456060   130 anrrphDQWVAvVGSWIpaqfaen-rastvaELSHAlpDHPAYIQYl-yDYALVNQRGIDvlGLNDTPPPDLAGirve-- 205 Salmonella enter...
AAM48633    141 iretnpGNAPVyARGWQnhlfpk--tgptaaELDAIfgDRIVILGSvdgHSRWFSSRALRegGVTASTADPQPGvsffer 218 uncultured prote...
Feature 1                                                                                       
BAB64699    191 -tteGEPTGLLvdaamklvfdvis----evsiherrdallrASRHALMRGVTTVVDVGSyfpgksekqvwqdftdIYEWA 265 Japanese rice
NP_435449   211 -danGNPTGLLlakpnagilystlakgpklpldyqvnstrhFMRELNRLGVTGVIDAGGgfqnyp-----ddyevIQKLS 284 Sinorhizobium me...
ZP_00095026 197 -dgkGEPTGLLretaaglvysvvp----apseemrraalklSTGQMLSYGITAFADAGVtmad---------vgtLSALS 262 Novosphingobium ...
NP_716619   201 dkttGKLLGILldnagdllmeqawkn-qpnlaeanyqgllnGLAQASKHGITTIGDGRLywkrg-------wletWLTAE 272 Shewanella oneid...
NP_523018   203 -madGKPTGLIkeppawqpveklip---prtparlkhaaeaAAHRLNSFGITGVQDAFVtr------------qiLTGWH 266 Ralstonia solana...
NP_700325   189 dpatGRLTGLLvesaagivervaad---hfteamgeaaiarAVEIVNSYGVTAFQDAASvl------------piMKALT 253 Brucella suis 1330
NP_518360   176 -dagGEPTGMLiarpnamilyatlakgpklppeyqvnstrqFMRELNRLGVTSAIDAGGgfqnyp-----edytvIRQLA 249 Ralstonia solana...
ZP_00088639 220 -dasGNPTGMLiarpnamilyatlakgpklpleyqvnstrqFMRELNRLGLTSAIDAGGgfqnyp-----edyevIRKLA 293 Azotobacter vine...
NP_456060   206 rdakGSATGKLfgdiaafnqlfas----issnadregglrqFFADMNARGVTGIIDPSAgpa-----------aaYEPLF 270 Salmonella enter...
AAM48633    219 dpltNTPLGTGrekagaelveqfi----pgdqlayqqrfvaWLPRAAAAGLTSVFDAWAvapset-----dayeiWRSLD 289 uncultured prote...
Feature 1                                                                                       
BAB64699    266 Hsv-----etMIMRVCLFFpmptwsrvydlih----ekgrmlsqwihlgGVKAFLDGSlg--ssSALFYEHYkddprsyg 334 Japanese rice
NP_435449   285 Denq----mtVRLAYNLFTqkpkeekqdfl--------nwtqsvkykqgNDYFRHNGAgemlvfSAADFEDFrqprpema 352 Sinorhizobium me...
ZP_00095026 263 Aegv----lkQRVRGCMRWtpllgdtpeangmalinaraaystprfrldCVKVVLDGVpte-srTAYMLDPYlahghddv 337 Novosphingobium ...
NP_716619   273 Knqa----ltARVSLRPWVypadeaneqlaffk--kiksndkqrliqinQVKIYSDGIii--ngTASTLDPYdwsytpqi 344 Shewanella oneid...
NP_523018   267 AadtdgqglpLRVVASMGVepeaggdglpdrq----tlaqvrsdrlrpdFVKVFLDGVpm--syTAAMLEPYapsdahgh 340 Ralstonia solana...
NP_700325   254 Gldnk-gkltAWAVTSLPLiepsfmfglsgdell-alrdeyrtrhvrpnFTKIFLDGVpg--arTSAFHDAYlddgvhpr 329 Brucella suis 1330
NP_518360   250 Qenq----ltVRIAYNLFTqkpkeeladfk--------hwtgsvpyrqgDDFLRHNGAgemlvfSAADFEDFlqprpdlp 317 Ralstonia solana...
ZP_00088639 294 Eddq----lsVRIAYNLFTqkpkeeladfq--------nwskmvkpgagNDFFRHNGAgemlvfSAADFEDFleprpdlp 361 Azotobacter vine...
NP_456060   271 Amrnq-gdlpLRVGYRIPVqpeakgheaqwf------snlmafrparadDGQLAFLGLge--slVAGMNDGVrmapgfss 341 Salmonella enter...
AAM48633    290 Qage----ltLRIFGSVREidnatkiaerfkr----fseefsgamvrpeAVKLAADGVpe--ghTAFLLTPYidshnedf 359 uncultured prote...
Feature 1                                    #                               #                  
BAB64699    335 l----qlvdmdylLNTTLELDksglQIAIHAIGDKANDMLLDmyeKVVDlngmkdhrFRIEHAqhlaPGAAKRFGkhgII 410 Japanese rice
NP_435449   353 ------pemegelEEVLRVLAenrwPWRLHATYDETISRALDvfeKVNKdipleglnWFFDHAetisDRSIDRIAalgGG 426 Sinorhizobium me...
ZP_00095026 338 ptrglpmitpdrlNPAIAAFDrmglTVKFHAVGDAAVREAIDsvaNARKvngwggpsHDVGHNsfvsPEDITRVRdlqMT 417 Novosphingobium ...
NP_716619   345 ph-gleyipatkmAWWLSELNkigyGAHIHAIGDAGVRNTLNaieTLRAqga--ttaYSMTHLemvsAQDIKRFAplrVD 421 Shewanella oneid...
NP_523018   341 dfrgaplyalavlTEKLTALDrqgtPVKLHAVGDGAVRLALDaieAVRKangmngprHQIAHItfiaPSDMPRFArlnVV 420 Ralstonia solana...
NP_700325   330 gyrgetlvtypdlVQHIDKSEklgmGLKIHCTGDYAVTEMLDaveAVRHfngpakvmHHIAHAsyvrPQDVERFAklsVV 409 Brucella suis 1330
NP_518360   318 ------etmepelEGVVRHLVaqrwPFRLHATYDESISRMLDvfeRVDReipfdglpWFFDHAetisPKNIERVRalgGG 391 Ralstonia solana...
ZP_00088639 362 ------asmeqelEPVVRHLVeqrwPFRLHATYDESISRMLDvfeKVDRdipfaglpWFFDHAetisPRNIERVRalgGG 435 Azotobacter vine...
NP_456060   342 -----seqdktalRQVATFAAkrgiPLEIHAYTDDSADAILTifeQVAQqydlrplrWSIAHLntgsPQTLERMRklgLA 416 Salmonella enter...
AAM48633    360 g---qpmiskadlTSNIETYFsydiPVHIHAIGGGAVRMSLDaieTARAstgndsvrATIAHMdfvhPEDIPRFSalnVT 436 uncultured prote...
Feature 1                                                      #                                
BAB64699    411 ASVQPDHilddansagkk--igieraerssySFRSLLDGGahLAFGSDWPvsd----inPLQAIRTAVSRkpvgwevpw- 483 Japanese rice
NP_435449   427 IATQHRMayqgeyfaer----yghgvaeatpPIRRMLDKGvnVSAGTDATrva---synPWVSLSWMVTGktvggmqly- 498 Sinorhizobium me...
ZP_00095026 418 WEFSPYIwyptpiaskdirgvigdermkrwiPIRDALETGalVVAGSDWSvvp---svnPWIAIETMVTRqipggsaetl 494 Novosphingobium ...
NP_716619   422 ADFQLGSdyiaeqdhdwaipfigkqrahallPINAILNTGanVTLSSDWNvnd----inPLVGIANAVYLknmgi----- 492 Shewanella oneid...
NP_523018   421 ADVSPMLwfphaytplfek-vvghartlhsyPIGSLIRAGtlVAGGSDWPagqq--tpdPWLGIEGLVTRrnpagnvpgv 497 Ralstonia solana...
NP_700325   410 ADLSPMMwypttfleghke-amgderatrfwPIADLHKSGalLAGGSDWPvip---vpdPWTGIEGMVTRqnpsgafpgv 485 Brucella suis 1330
NP_518360   392 IAIQDRMafqgeyfver----ygaaaagqtpPIQRMLAEGvpVGAGTDATrvs---synPWTSLYWLVSGrtvgglpl-- 462 Ralstonia solana...
ZP_00088639 436 IAIQHRMafqgeyfvdr----ygkraaeqtpPIQRMLSEGvpVGAGTDATrva---synPWTALYWLASGktvggaql-- 506 Azotobacter vine...
NP_456060   417 YTVQMGPyfeglairda----nppgatdnspPVRLALDKGlvVAGGTDSTrig---iagVWHAIEYHITGiasggsvrk- 488 Salmonella enter...
AAM48633    437 AQTSIQWaardpsyfnigs-fvgmdkvenayPVRSVMMSGanQSFGADWPasaylstykPLELIEAAVTRrlpgtpdmta 515 uncultured prote...
Feature 1                                                   
BAB64699    484 --ipaerlsldDSLKAhTISAAYAcfldhvlGSLSEGKYADFVI 525 Japanese rice
NP_435449   499 --prancldreTALRMwTEKVTWFsneegkkGRIEKGQFADLVV 540 Sinorhizobium meliloti
ZP_00095026 495 --gegqkitlaQALRIfTENGASFlgqrdqfGSIETGMKADFIV 536 Novosphingobium aromaticivorans
NP_716619   493 -------adihQAIAAyTINPAQAlgldditGTLEVGKSADIVM 529 Shewanella oneidensis MR-1
NP_523018   498 -ldaheairlgQALRLyTLNSATAmglgqetGSIEVGKSADFAV 540 Ralstonia solanacearum
NP_700325   486 alwpeqaidlaTAIRIfTLNSAIAmgigaetGSIEPGKSADIIV 529 Brucella suis 1330
NP_518360   463 ---ypqglprdVALALyTHGSAWFsadqgnkGQIKVGQLADLAA 503 Ralstonia solanacearum
ZP_00088639 507 ---ypqglsreTALELfTRGSAWFsseqgrkGQIKVGQFADLAA 547 Azotobacter vinelandii
NP_456060   489 --paserltrlEALALyTRHAAWLafaeqhrGQLSVGKQADLAV 530 Salmonella enterica subsp. enterica serovar Typhi
AAM48633    516 -rnanqavtlaEAIIAmTRNTAIQvgeldtlGSLTEGKRADLVL 558 uncultured proteobacterium

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap