Conserved Protein Domain Family
DUF4893

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pfam16233: DUF4893 
Domain of unknown function (DUF4893)
This family consists of uncharacterized proteins around 200 residues in length and is mainly found in various Pseudomonas species. The function of this family is unknown.
Statistics
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PSSM-Id: 406607
Aligned: 10 rows
Threshold Bit Score: 175.658
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Bresu_0281            47 WRGIVRSADRDRY--ARRDAAWRLALEQARRQTGS-GDLRSLGDLI------EPGAARRDVTPPVGAYRCRTVKLGSQgG 117
PRJNA213647:NX02_22560    38 WRRIATPADRRRI--GEWRTAFVEALAVARADGHG-AEIDREGALL------VPDAALDQVDLPPGNYRCRVVKLGTQ-V 107
Q1GUL5                    40 WRATATDADKQRI--RDWYGSWQAALADARAKGHG-AEIDDEGALL------QPMAALPNAHLPAGDYRCRTIKIGAK-G 109 Sph...
ELS:G432_14090            28 WRVIATSADRERL--RGWRTAWIKALDQVAAAGQS-QQIAPLGALM------QPDAAQPGATPPAGDYACRVFKLGSR-R 97 
BAK68053                  38 WRAIASEEDAARL--DGLPRTWQAALDAAAKFRRA---LAREGDLL------APEAARNHPAPPPGSYHCRLVKLGQA-E 105
ELS:G432_10360            51 WRAIARPEHAGLI--DGLPDRWVAARAGLGKSRQA--LVASFGALL------EPGAALVRPMPPTGRYRCRTLRFAPD-- 118
jgi:Plav_3633             28 WQAQVTAHDRDRL--ERYEDAVTKGMMESRVAGEEhGTYNELVSIM------EGETVAADPERLKGDWNCRTIKAGGP-- 97 
PRJNA212980:JCM7686_1583  37 dgtaIRAEDVARLseENLLEVYGSALRQVLQSADS-ATLGVVTSALrgaplpADDAAL---AALAGDWQCNMTKLGGI-- 110
QianUST:TMO_2453          33 fptslATEDQQRL--EAFDTARAEAVAEARAGGSP-EDVSVLDEVL------SGEPTTMEPAEMAGIWRCRTIKLGGL-- 101
jgi:Swit_3433             36 WRQIVTAPDRDRL--ARWRAAWIAGLDKATAAGSA-AQVAAQGPLL------KPDAALDDPLPPQGDYSCRVIKMGAQ-T 105
jgi:Bresu_0281           118 EQGLGYVVYDWFACRI-EATPRGLKFSKTTGSQRPSGLLFPEDD-RQMVMLGSLALAVEPPANSYG------QRPER--- 186
PRJNA213647:NX02_22560   108 KGRLSYVAYPPFGCRA-TITPAGFRMEKLNGSQRPAGYAYPDGS-RRMIFLGSMALGDETMAMDYG------YHPDR--- 176
Q1GUL5                   110 RDGLGFIAYGWFRCRV-TAEQGLSSLTKLTGSQRPVGLIFPDNL-RRQIFLGTLELGDEKMAINYG------SDRMR--- 178 Sph...
ELS:G432_14090            98 PAGPVVTTLPPFTCRV-AQEGGILSLTKLEGGQKPVGLLFPQDG-SRMIFLGTMMLGDERRALEYG------RDPER--- 166
BAK68053                 106 RREAPYRGYPAFFCNVrGDTNESLFFTKQTGSELPSGWLHRDGEaRRLVLTGAKQPSGNGTSLVYG------EDAAS--- 176
ELS:G432_10360           119 -RPGGFQAYQSWFCFV-GDDGDLTTLSKADGSDRPAGRLWPDGD-RRMVFIGATAFDAEPAPPAYG------DKAEA--- 186
jgi:Plav_3633             98 --FAGFVVYGWFRCEV-VERDGRLFFEKRTGSQRQSGFLYERDE-KSWVLLAAPNEGHSGPIRAYSgpeggvTDPQMi-- 171
PRJNA212980:JCM7686_1583 111 ---APAVVYPPFRCRI-TADGNALAFEKLSGSQLTRGTLHRDGD--RILYLGVDYIRGD-TPPSYA------EMPATipd 177
QianUST:TMO_2453         102 ---LPLTIYRDFKCRI-TDDGGGLRLEKLTGSQRTGGTFYDLADeTRLGYAGAGWVAGE-APMQYG------SDPER--- 167
jgi:Swit_3433            106 KGLMDYVAYPYFNCRI-SMLDGRLHLAKLNGSQRPVGDIFPDEG-RRMIFLGAMTLGDEARPLPYG------RDGER--- 174
jgi:Bresu_0281           187 -------DLIAVLERIGEARWRLVIPWPQTESNLDLIEL 218
PRJNA213647:NX02_22560   177 -------DVAGAVERIGPGRWRLVLPYPRFESVLDVVEL 208
Q1GUL5                   179 -------DMAGLIERIGDNRWRLVLPAPAYESLLDVIEL 210 Sphingopyxis alaskensis
ELS:G432_14090           167 -------DMIGAFERIGDQRWRLVLPYPRWESLLDVVEL 198
BAK68053                 177 -------DLVGVVERIGPFRWRIVMPWRGETPGLDIYEL 208
ELS:G432_10360           187 -------DTVGVVERVADFQWRLVLP--RGAAGLDVLEL 216
jgi:Plav_3633            172 -------DQPAIVSLLEDGRARAVFPWPELESTFNVLEM 203
PRJNA212980:JCM7686_1583 178 paarssfPDVGILEILSPKQARIVLPQPYLESTMNVLSL 216
QianUST:TMO_2453         168 -------NQVGYLVVLGPERMRLELPLPQFESKFDILEL 199
jgi:Swit_3433            175 -------DMVGVVERVAPQRWRIAFPYPRWESTIDIFEL 206
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