Conserved Protein Domain Family
VI_Rhs_Vgr

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TIGR03361: VI_Rhs_Vgr 
type VI secretion system Vgr family protein
Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.
Statistics
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PSSM-Id: 274542
Aligned: 35 rows
Threshold Bit Score: 674.685
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_009897220  18 LTIKTPLaGRAELVLSDFQCSEGLSVLFDMRLGLASRDP-TIELKQMIGQAVTISLqppgGIVGGS---ARHFHGYVTQF 93  Burkholderia th...
WP_011396080  11 LTIKSPL-GADVLVMKKLKVTECLSEPFETTATVWSTDY-NIDPNAIVGKEVTISV----HADPSK---PRHFSGIVTQL 81  Hahella chejuensis
WP_010953999  19 LNILTQT-ANDEFLLEHFSGTEELSKLYEFDLALLSQQS-DVKLKSLIGSQATVEI----ELSNGS---FRHINGYVQRF 89  Pseudomonas putida
WP_011397342  82 IRIDTPL-GKDVFLLRHFRGQEGYSQLFQYDVDLLSHKR-DIRAEDIIGEAVQVTI----GADGGA---PRVFSGHVSYF 152 Hahella chejuensis
WP_011334785   9 ttlsltatslsalyPESLSGDEALNAL-SAQILNGLNDGtSLTLTSAIATHVTTTL----HNDAQL----RPFDALVAEI 79  Pseudomonas flu...
WP_011122432  43 IAVSTPL-DDDALVLTGVSWTEQLGRPFGGTLDLVSSEG-DIDPLDLLKQPVSIRI----GDADDS---PEYLHGYVTRF 113 Rhodopirellula ...
WP_008573304   5 ITLHSDL-GE-RLLLHRMQASEALGQLFDYRIDALCTEL-QPNLRDLLGTPVAVQL----ADGEGE---QRWYHGMVASC 74  Xanthomonas
WP_012444470  23 IRVKTVL-EEETFVVKHFTGVEEVSAPYTFDIELLSAQA-GLQLKQLIGQPLRLSL----GDEFDG----RVVHGYVREF 92  Xanthomonas oryzae
WP_011152273  11 INISTPY-GKDAIILNSFEYREEMSELFSLRVYAYFNGQ-KGELNQIMGQPVIIKM----DNNSQVmlePRYFHGFVAKA 84  Vibrio vulnificus
WP_011297889  13 aTVTTPF-GDDVLLLDGFAGREALSELFSFQLRMRSADK-ALDASRIVGQKVTVRL----QRPGGF---LRCFNGIVTRF 83  Cupriavidus pin...
WP_009897220  94 SHTG----A-------DGGLAT-YSATVQPWLWMLSRRVDSRIFQDKSARDILDEVFSQYSaLA-SYEFR-A-GRT-LKP 157 Burkholderia th...
WP_011396080  82 SAHQ----I-------EENHYReYRLKMVPWFSLLKYRRDCRIFQELTVQKIIDKVFSELG-FS-DVSWR-L-QKT-YEN 145 Hahella chejuensis
WP_010953999  90 STQG----S-------DGGYVR-YAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGFGtLA-KYEFR-V-SKP-LKS 153 Pseudomonas putida
WP_011397342 153 ESTGl---E-------KRGLYG-YKAVLVPWLWFLGKNTDCRVFQNMTAPKILEAVFTEAG-FS-DFRFTgL-YNE-YPE 217 Hahella chejuensis
WP_011334785  80 RQLP----A-------DATAER-YKLVLRPWLWWLTLASNNRVFQNLVTSDIVTSIFKAHG-FT-DFKLS-L-TGS-YTP 142 Pseudomonas flu...
WP_011122432 114 GQVG----T-------NAGLYQ-YHATLAPWMGLLRHVGGSQVFQQQTVVEIAKAVIEARG-FTgELEDR-L-TQT-YRQ 177 Rhodopirellula ...
WP_008573304  75 AHNGyavvD-------ALDYAV-LELQVVPKPWLLTQRRDCRIYQDMSVPEIVTSVLGEIG-YG-DVQQQ-L-SAQ-YAK 141 Xanthomonas
WP_012444470  93 AQVG----K-------QGELSA-YRCELAPWFAFLQYTSNCRIFQDLNVLDIIERVFDGYPqLA-DYAHD-LdAAR-YPK 157 Xanthomonas oryzae
WP_011152273  85 TLAG----SrvtkfedGENYKN-IELVVVPKLNFADYKINSRIFQNKDIKEIISLILGEHG-V--DFSFS-L-TKS-YAK 153 Vibrio vulnificus
WP_011297889  84 AHTG----A-------DPSHAF-YSAELAPRLWLLTLARDRRIFQNQSALDIIRTVLGEFE-VA--FDAR-V-TASrYPV 146 Cupriavidus pin...
WP_009897220 158 YSYCTQYRETDLNFVLRLMELEGLFFYFEHAEDGHKLIIDDDSTRAKPID-G-L-PSLRY-AsG-EILE--DEAVVTQWA 230 Burkholderia th...
WP_011396080 146 RVYCVQYRESDFDFVSRLLEEEGIYYYFQHEEGKHTLVLSDNAKGYESVS-E-S-SLDV----T-DGAH--TKFKISSWE 215 Hahella chejuensis
WP_010953999 154 HSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSSTLLPLP-EqP-QIRYH-SaSvTETA--D--SITQWQ 226 Pseudomonas putida
WP_011397342 218 LEYCVQYRESDLNFALRLMEQEGIYFYFEQAQKRHLLVLADDKSTNALME-P-R-KIEh----S-SRPR--NGGYIQEWR 287 Hahella chejuensis
WP_011334785 143 REYCVQYGETDFAFVSRLLEEEGIFWFFTHEDGKHTLVLGDSNDAFVQIPnG-P-KVKYL-GqQ-LGER--ELHGIRSGQ 216 Pseudomonas flu...
WP_011122432 178 RAYCVQYGESDFQFLSRLFEEEGIYYFFEYTQDQHTMVLCDDVSAHQAST-S-FdSLPYH-A-V-EQPG--TETCLSQWT 250 Rhodopirellula ...
WP_008573304 142 RTYCVQYREDDFSFISRLLEREGIYYYFTHTRSAHTLVLADALGAHATKN-G-VdSLPYV-PpG-TDDRrlMRSVVSHWR 217 Xanthomonas
WP_012444470 158 LSYCVQYNESDFQFVSRLLEDAGIYYAFRHSDDAHTMVLSDDSTSSEQFG-EpA-SIEFV-Sd--QGTL--QRPGVHRWA 230 Xanthomonas oryzae
WP_011152273 154 YNYKVQYEESDLQFVKRLLSEEGLSFCFSHTKSSHVIEIFDDASYYKPGA-E-F-LIDFN-S----GTA--ELGHISSWH 223 Vibrio vulnificus
WP_011297889 147 REYCVQYDESPLQFISRLMEEEGIFYYFTFSDGAHTMVLGDSPSAHAALA-H-E-AELWGgQpG-EQAA--GLPMLAAFR 220 Cupriavidus pin...
WP_009897220 231 AQRQLMSGAVSMKAYDYKVPAARRYVSgESD-FNQGEVERYEIYDYVGlhGFD--STDRGEELARFRLESLAASGKTFSG 307 Burkholderia th...
WP_011396080 216 HAYQLVSGKVSLTDYNFETPATSLAVFqGTK-VKLPNISKFEVYDYPG--EYA--QKGEGDGYAKTRMETLESGYSLVNA 290 Hahella chejuensis
WP_010953999 227 STRQLQSGQIAVRTFDYRQPRNFLPVTmQSL-NQQGDVDRFEIYDFPG--QYThgSYEDGEAIVRNRIEALELMGKTFYG 303 Pseudomonas putida
WP_011397342 288 RTYQYFSGKWSLSDFNFEKSDQSLLAEcSAL-NELRGASAYERFDYPG--AFG--DQDRGRRLTKLRMEEEESRFTRVNG 362 Hahella chejuensis
WP_011334785 217 VCLQAVAGVYKATDYEFTTPTTSLYGQaEAV------AGPRSIYEHPG--GYN--AKARGDALTKQRVDGLRSEEKRFVG 286 Pseudomonas flu...
WP_011122432 251 YERDFNTASYVLRDYDFQKPRAEMTVRqNAS-D---TASDWEWYEFPG--QFF--ETDDGQHYARVLTEAATSDQHAAAV 322 Rhodopirellula ...
WP_008573304 218 SARGVHSSQHGSTDYDPLQPRASLAADaDAGgEQLHTVDGLIAFDYPG--AHT--VQADGRRYMQVRTEAHNVQRASHAA 293 Xanthomonas
WP_012444470 231 ARRRVGPTAHALKSFDFKQPRTALAASnGRE-VPVGALPQLERYHYDGaaRFA--DSRVGDALAGLRGEEAAWPTKLFEG 307 Xanthomonas oryzae
WP_011152273 224 EAQSMVIMRSHKSGYDMKKPASHPNNTaKGS-ESLFTVPSSEHYEYLG--EAE--SGDQYKTRNTHTIESLQQNAYVCSG 298 Vibrio vulnificus
WP_011297889 221 MEQGLGPANHVLVDYDYVQAQTSQGSAqPDS-S----APGARQYIFPG--RHK--DASDAARKAAVRVAAQQVEARSGSG 291 Cupriavidus pin...
WP_009897220 308 TSTGRTLAPGRYFELSAH----Y----DhdngPMHDR-Q-FLLTNVRHHGVNNYQSNEGSGS--------YHASFQCIRK 369 Burkholderia th...
WP_011396080 291 ESNYPSMCSGYIFTVGVH----P----D----SKESK-EkYVVTSVTHNAEEGSYRAGVESAp------hYSNSLQCAPS 351 Hahella chejuensis
WP_010953999 304 ESNCRAMKPGYTFELTQHylhdT----G----AAENR-K-FLLLSVEHRGSNNYMTGDQAG---------YVNRFVCVRK 364 Pseudomonas putida
WP_011397342 363 RSNLPHLLVGRKFMLESE----E----C----VTDNR-KsFVVTAVRHYAYEGGYTSADSPEsadkeksvYFNRFECLPD 429 Hahella chejuensis
WP_011334785 287 ESDCRWLIPGHWFTLDGH----E----D----ASLNI-D-WVVTRVTH-----------DAShe-----sYRNRFEAIPK 336 Pseudomonas flu...
WP_011122432 323 DVSTPSVIAGNLLTMTSH----P----V----DDLNQ-E-YLIVGRHLMMTAGDVSAGGGGAhs----fhLSNRLQLLPS 384 Rhodopirellula ...
WP_008573304 294 TTNACGLMVGALFRLRGF----P----R----AELNQ-E-YLVLSAHTTLAAP----EHGSGep-----pFSSSVQVMES 350 Xanthomonas
WP_012444470 308 EGNSSRLVCAGCFQLERH----PdfigR----SEQDR-Q-FFVVKLQREGRNNFSSDMRDAQsp-----sYQCTATVLRR 372 Xanthomonas oryzae
WP_011152273 299 ESSCRSFTVGRSFKFGKH----E----D----PSRIGkE-FVLSSIVINAAVFNQVGHGGPSnq-----gVRSYFTCIES 360 Vibrio vulnificus
WP_011297889 292 ESNCHGLAAGSTFTLNGH----V----N----AALNA-E-YVVRAVEHSV-----------Ags-----hYANSFTVFPL 341 Cupriavidus pin...
WP_009897220 370 KIPFRPPLAHARPVIPGPQTAIVVGPKGEQIHTDALGRVKIQFHWDRIGQRNQGSSCWVRVSQPWAGGGFGSVQIPRIGD 449 Burkholderia th...
WP_011396080 352 TTIMRPVLKTPKPVISGTQTALVVGPSADEIYTDEFGRIKVQFYWDRLGKKDDKSSCWIRVAQIWSGKNWGTQYIPRIGQ 431 Hahella chejuensis
WP_010953999 365 KIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCWVRVAQSGASGGFGSIQIPRVGD 444 Pseudomonas putida
WP_011397342 430 NVSFRPALSTPKPRIDGVQTAIVCGKSGDEIYTDEYGRIKVQFHWDRYGERNENSSCWVRVATPWAGKKWGSMGIPRVGQ 509 Hahella chejuensis
WP_011334785 337 ATPFRPQRLTPKPRMH-PQTAIVVGKSGEEIWTDEYGRIKLQFPWDRDGKNDETSSCWVRVVLPWSGKGFGMQFVPRIGQ 415 Pseudomonas flu...
WP_011122432 385 SIPYRSRQTTARPVMRGPQIATVVGPDGEEIWTDAYGRIKVQFAWDLVGTGDDSSSCWIRVTQPWTGKGWGAVSIPRVGE 464 Rhodopirellula ...
WP_008573304 351 RLPFRSLQRTATPTIAGLQTAVVTGDTDEDIAVDAHGRVQVTFHWATAARPHAAPSCWVRVASMWAGKGWGAMSLPRVGQ 430 Xanthomonas
WP_012444470 373 KIPYRPLRVTPVQRMPGPQTATVVGPPGEELHADRYGRVKVQFHWDRHGEFRENSSCWIRSASPWAGADMGGVSPPRVGQ 452 Xanthomonas oryzae
WP_011152273 361 GKVHRPAVNFVRPVIRGIQTAVVTGNKQGEIYVDKYGRIKVQFHWDREGKFDTTSSCWIRVAQQIAGNGWGSSFLPRVGQ 440 Vibrio vulnificus
WP_011297889 342 AVPFRAPLVTPRPLVAGTHTATVVGSQGEEIWTDQHGRIKLKFHWDQAPGADQDSSCWVRVAQGMAGQGWGHLFLPRVGQ 421 Cupriavidus pin...
WP_009897220 450 EVVVTFLDGNPDRPLILSSVYNAQNMPPWALPAGATQSGFLTRSH-KG-Ts-E--NANAIRFEDKLGEEEIWLHAERNQR 524 Burkholderia th...
WP_011396080 432 EVVISFLEGDPDRPLIIGSVYNAEQMPPYELPAKKTHTGVKSRSS-KG-G--GteDYNEIMLIDEKGEELIRVHAQKDRD 507 Hahella chejuensis
WP_010953999 445 EVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQSGFLTRSM-KGdG--G--TANFFRFEDKAGAEQIIMHAERNMD 519 Pseudomonas putida
WP_011397342 510 EVVTTFLEGDPDRPLVIGGVYNKGNMPPYSLPDNKSRFGVKSQST-KG-GqtS--NYNEISFDDKKGEESLNIHAEKDFN 585 Hahella chejuensis
WP_011334785 416 EVIVTFIDGDPDRPLVTGCVYNGDNALPYALPANQTQSGIKTQSS-KG-G--G--GFNELRFEDKKDAEEVFLQAQKDLK 489 Pseudomonas flu...
WP_011122432 465 EVIVAFLDGNVDRPIVTGRVFNADRMPPEDLADGQAKTIFRTRST-KE-G--DtnCFHELTFDDTKDAEQIYLHSERDFV 540 Rhodopirellula ...
WP_008573304 431 EVVVSFLEGDPDRPLIVGSVYNGDHAPPFSLPDNKTQSGVRSRSL-LG-Ga-A--DFNELRFDDKAGAEELYLRAQRDLR 505 Xanthomonas
WP_012444470 453 EVVVDFLDGDPDRPIITGRVYNEDNMPPFGMEV----SGLKSKTV-KG-G-----GYNELSMHDSAGGELFNMRAQRDMV 521 Xanthomonas oryzae
WP_011152273 441 EVIVEFINGDPDQPVVTGSLYNGTQAPPFSLPEKKTQSGYRSQSVeKG-A--S--NYNELRFEDKPGEEHVYLHAEKNFQ 515 Vibrio vulnificus
WP_011297889 422 EVVVSYVDGDPDRPLVTGSVYNGQVTPPVTLPSMQTQSVIRSRTS-KN-G--S--AGNELRMEDKAGAEELYLHAQRDMN 495 Cupriavidus pin...
WP_009897220 525 IEVEHD--------ESHTVGAKRT 540 Burkholderia thailandensis
WP_011396080 508 ITVEND--------DTESVGNNQS 523 Hahella chejuensis
WP_010953999 520 TEIELD--------ETHDVGNNRS 535 Pseudomonas putida
WP_011397342 586 MEVKNNiganakghSTSSIGGNas 609 Hahella chejuensis
WP_011334785 490 INVLND--------TTATVGHDET 505 Pseudomonas fluorescens
WP_011122432 541 RVVEND--------DSLKVGFDKS 556 Rhodopirellula baltica
WP_008573304 506 EEVQHD--------HTSTIDNDRV 521 Xanthomonas
WP_012444470 522 TTVLND--------QNASIQNNKS 537 Xanthomonas oryzae
WP_011152273 516 MVVEDS--------ADVLVENNKT 531 Vibrio vulnificus
WP_011297889 496 VAVENKl-------STTVVGAGES 512 Cupriavidus pinatubonensis
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