1SUL,3PQC


Conserved Protein Domain Family
GTPase_YsxC

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TIGR03598: GTPase_YsxC 
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ribosome biogenesis GTP-binding protein YsxC/EngB
Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes. [Protein synthesis, Other]
Statistics
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PSSM-Id: 274670
Aligned: 90 rows
Threshold Bit Score: 209.252
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1SUL_A         6 SEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKVS 85  Bacillus subtilis
WP_009610832   6 AEFVGSAFNESQYPKDKIPQIAIVGKSNVGKSTLINTVLGRKNLAKVSSTPGKTRGINFYLVNRAFYIVDLPGYGYAKVS 85  Caldanaerobacte...
WP_014545874  23 AKFVKAAVSLKGLPEEHLPQIAFLGRSNVGKSSLMNTLMGQKKLVKISSTPGKTRELNFFKVNDEFFLVDLPGVGFAKVN 102 Fibrobacter suc...
WP_011283786   2 fKFVKSSSDYTNWYFHKNSEIAFWGRSNVGKSSLLNALT-SKGLAKVSKTPGRTQLINFFENELNQVYVDLPGYGYAKLS 80  Mycoplasma
WP_011113826   2 NRFIKSATSLKDCINDSKKEVCLIGRSNVGKSTIINGLANAK-IAQTSKTPGRTVTMNFYEIS-NQRIVDLPGYGYARIK 79  Mycoplasma gall...
WP_011160392   5 ATFVRSIVHFKDIPLKKQPEIVLMGRSNVGKSTFINALTQRKKLAKISQTPGKTITLNYYDINESFYLIDTPGYGYAKKS 84  Onion yellows p...
WP_010925043   2 LHFIKSASNSQSWYNHDKVEICFIGRSNVGKSSLINSLSNSA-VSKVSNTPGRTQLINFFEDDQKNVYVDLPGYGFAQMP 80  Mycoplasma pulm...
WP_011477928  22 AKFVAGAMDIKQLPNFALPQIAFVGKSNVGKSSLINTICNNKKLAKVSNTPGRTRQINFFNLVDKLIIVDLPGYGFAQVP 101 Rickettsia bellii
WP_006689168   2 AKFIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKK-IARTSNTPGRTQLVNFFD-FNNFRLVDLPGYGFAKVS 79  Ureaplasma parvum
WP_011076867   2 PSFIKSCFSSNDWITDDKKEICFIGRSNVGKSSLINALANAK-IAKTSNTPGRTQLANFYD-FDKFRLIDLPGYGYAKVS 79  Mycoplasma pene...
1SUL_A        86 KSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIP-KGKWDKHAKVVRQTLN 164 Bacillus subtilis
WP_009610832  86 KEMKKQWAYNIETFLNTSKNLKHALLLIDIRREPTEDDFMMVNWFSFKNLPFSVVLTKADKVN-KSEANKAIENICRSFN 164 Caldanaerobacte...
WP_014545874 103 NAKRDQMSDFIREYVEKCKDLKGLIYLVDIRHGGTPIDIETVESIRATGCPVLVVASKRDKVN-QSELAKGLRDIQQRLD 181 Fibrobacter suc...
WP_011283786  81 KDLKDKMMAMIEEYLLNRSNLKMLYLLIDSRLGFTKIDLEILSFLKENNLNYFIVFTKIDKLN-TKEKNELNKKIKTYLE 159 Mycoplasma
WP_011113826  80 KSQKEEISLFLSDYLNHRKNLVGIFLILDLGV-ITDQDIEIVRLLTTLDVEYYIVFNKIDKYP-KSAYINNKEKILDALK 157 Mycoplasma gall...
WP_011160392  85 KEIQKQLLPMIISFLEQTSHLKAVFQLIDFKVGATQEDDRIHQALLQAGFEVVLLFVKKDKVK-KNLVPKQLKMLVNHFP 163 Onion yellows p...
WP_010925043  81 KDKLEKMHQMIDEYLQNRKNLKTIVLLFDSRRGILDQDLDFINWAQQAKKNIILLATKIDKLN-QAQKHKLLVSLKE-LN 158 Mycoplasma pulm...
WP_011477928 102 NQVKDQWEILINHYLRKSDNLKLVNLLIDSRRGIKENDKKVAELLLANKRDFQIIFTKSDKVTdRKNLNLEAQNFLATLN 181 Rickettsia bellii
WP_006689168  80 KEKQTDLAAIIDQYLGYRQNLCAVFQICDINV-LTNDDVEMSRYFENQKYAHFVVLNKLDKVN-KSYFNNNKHKIAKFLN 157 Ureaplasma parvum
WP_011076867  80 KSKHFELSKIISEYIYLRKNLVAVFQIIDISV-ITDLDLQMSELLSNRFNQHYIVLNKADKEA-KSYFDNNFAKIAAKLK 157 Mycoplasma pene...
1SUL_A       165 IDPED-ELILFSSETKKGKD 183 Bacillus subtilis
WP_009610832 165 ISSD--RVIVFSAVEKTGIS 182 Caldanaerobacter subterraneus
WP_014545874 182 L---DqKPLCVSSLKKTGLD 198 Fibrobacter succinogenes
WP_011283786 160 KESFN--YLIVSSETKYQID 177 Mycoplasma
WP_011113826 158 VN-Ed-RILLISAKNKQNLN 175 Mycoplasma gallisepticum
WP_011160392 164 QIk---YFFLISSKQQEGLE 180 Onion yellows phytoplasma
WP_010925043 159 LEk---SVLLVSSLKRTNID 175 Mycoplasma pulmonis
WP_011477928 182 YSc---NLIYVSSRSKEGAR 198 Rickettsia bellii
WP_006689168 158 IS-Td-RLLCVSAQNNINII 175 Ureaplasma parvum
WP_011076867 158 KD-Ke-NIVCVSAKNKTNIP 175 Mycoplasma penetrans
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