1EKJ


Conserved Protein Domain Family
beta_CA_cladeB

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cd00884: beta_CA_cladeB 
Click on image for an interactive view with Cn3D
Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Statistics
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PSSM-Id: 238449
Aligned: 41 rows
Threshold Bit Score: 238.98
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:zinc binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        # #                                            
1EKJ_A       20 GFLHFKKEKYDKNPALYGELAk-GQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYdqa------kyAGTG 92  pea
AAF54311      7 GIMRYRNTTREQMVKEFQKVRd-NPEPKAVFFTCMDSRMIPTRYTDTHVGDMFVVRNAGNLIPHAqhfq---deyfSCEP 82  fruit fly
AAM15604    166 GVIQFRNTIRKDLVKQFEEIKn-NPSPTAVMFTCMDSRMLPTRFTQSQVGDMFVVRNAGNMIPDApnygafsevsvNTEP 244 nematode
BAC73369      6 DHARSFKRQVDFESGEYRKLAe-GQYPEALFITCSDSRVIPALITGARPGEIFELRNAGNIVPPHgqh------gaSGEA 78  Streptomyces ave...
CAF23654      7 GIADFRQGLTEESRHLFANLAl-GQTPDVLFIACSDSRVVPNLFASTNPGDLFVLRNIGNLIPPFsvd------sdNSAL 79  Candidatus Proto...
ZP_00711238   7 GFLKFQREAFPKREALFKQLAt-QQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYgp-------epGGVS 78  Escherichia coli...
ZP_00775896   7 GVAKFQRDVFPKNKEVFQKLAt-SQNPEVLFITCSDSRIDPNMVTQTGPGDLFICRNAGNVVPPHsn-------qtGGMT 78  Pseudoalteromona...
ZP_00874125   7 RVFSFEKTVFPDSRELFGKLStqGQSPKALMISCADSRIVPEQIMQAEPGELFVCRNAGNMVPPFat-------mnGGVS 79  Novosphingobium ...
ZP_00988034   7 GFLRFQREVYPQRIELFKQLAt-QQNPKALFVTCSDSRVVPELLTQREPGELFVIRNAGNIVPSYgp-------epGGVS 78  Burkholderia dol...
ZP_01018018   7 GVVRFQQHVFPEKQELFERLSk-GQSPEALFITCSDSRIETAMITQTDPGELFICRNAGNIVPPHtd-------ntGGMT 78  Parvularcula ber...
Feature 1                          #  #                                                         
1EKJ_A       93 AAIEYAVLHLKVSNIVVIGHSACGGIKGLlsfpfd-----gtystDFIEEWVKIGlpakakvkaqh-------------- 153 pea
AAF54311     83 AALELGCVVNDIRHIIVCGHSDCKAMNLLyqlrdpdfasklnrrlSPLRSWLCTHantslerfqewrdagmkdplifsse 162 fruit fly
AAM15604    245 AALELAVKRGGIRHIVVCGHSDCKAINTLyglhqcp---knfdvtSPMDHWVRRNgfasvkrlnerlhrgpssmkfesev 321 nematode
BAC73369     79 ATIEYALEVLGVQNVVVCGHSHCGAMGALksgdd-------lsmlPGVDAWLELArpdlapmlgt--------------- 136 Streptomyces ave...
CAF23654     80 AAIEFSIFSLNVPDIIVCGHSECGAMRALvegiq-------gnccSHLQSWLKHGenslnlvrngm-------------- 138 Candidatus Proto...
ZP_00711238  79 ASVEYAVAALRVSDIVICGHSNCGAMTAIascqc-------mdhmPAVSHWLRYAdsarvvnearp-------------- 137 Escherichia coli...
ZP_00775896  79 ASIEFAVAALGVEHIVICGHTDCGAMKGAlapea-------ldelPHVKEWLGHCrgatevvkhkh-------------- 137 Pseudoalteromona...
ZP_00874125  80 STVEYAVVALGVRDIIVCGHSDCGAMKALaapel-------pqgmPNVVAWLRHGsaaehvvsscs-------------- 138 Novosphingobium ...
ZP_00988034  79 ATVEYAVAVLGVRDIVICGHSDCGAMGAIarctc-------ldhlPAVANWLRHSdaakvinashq-------------- 137 Burkholderia dol...
ZP_01018018  79 ASIEFAVAALRIPHIVICGHTQCGAMTGAmdpgg-------lehlPHVRKWLGYAeaavaivkdqg-------------- 137 Parvularcula ber...
Feature 1                                                                         
1EKJ_A      154 ----------gdapfaelcthCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELW 209 pea
AAF54311    163 tplrrfvayideeqkfaledkLSQINTLQQMSNIASYGFLKARLESHDLHIHALWFDIYTGDIYYF 228 fruit fly
AAM15604    322 apsqsfdaiidpmdtlamedkLSQINVLQQLINICSHEFLKEYLESGRLHIHGMWFDIYKGEDYLF 387 nematode
BAC73369    137 ------------acddpslpdVAQCNIVNQLSTLRSYPVVRQRLETGLLRLHGWYYEVDTGQVYEL 190 Streptomyces avermitilis MA-4680
CAF23654    139 ----------tinpslsehnqISQINVLQQIEHIKSYPFIRERLDKNELRIHGWWFDIAHADVYCY 194 Candidatus Protochlamydia amoe...
ZP_00711238 138 -----------hsdlpskaaaMVRENVIAQLANLQTHPSVRLALEEGRLALHGWVYDIESGSIAAF 192 Escherichia coli B171
ZP_00775896 138 -----------gsvgsehldeVTKENVLLQIQHLKTHPSVAGRLACKEVQIHGWVYSIETGEVLCY 192 Pseudoalteromonas atlantica T6c
ZP_00874125 139 ----------phlhgnervraVSLQNIIAQIAHLRTHPSVAAAIARGEMALHGWFVDISAGMVLGL 194 Novosphingobium aromaticivoran...
ZP_00988034 138 -----------fdtprakldgLVRENVIAQLANLRTHPSVALALEQGRMNLHGWVYDIERGSIDAL 192 Burkholderia dolosa AUO158
ZP_01018018 138 ----------dtltpeaqmrmLLEQNVILQLRHLETHPSVAVRLARGDLRLHGWVYDIEKGTVDAY 193 Parvularcula bermudensis HTCC2503

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