Conserved Protein Domain Family
gltX_bact

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TIGR00464: gltX_bact 
glutamyl-tRNA synthetase, bacterial family
The glutamyl-tRNA synthetases of the eukaryotic cytosol and of the Archaea are more similar to glutaminyl-tRNA synthetases than to bacterial glutamyl-tRNA synthetases. This model models just the bacterial and mitochondrial forms of the enzyme. In many species, the charging of tRNA(gln) proceeds first through misacylation with Glu and then transamidation. For this reason, glutamyl-tRNA synthetases may act on both tRNA(gln) and tRNA(glu). This model is highly specific. Proteins with positive scores below the trusted cutoff may be fragments rather than full-length sequences. [Protein synthesis, tRNA aminoacylation]
Statistics
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PSSM-Id: 273092
Aligned: 10 rows
Threshold Bit Score: 592.019
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O51345   2 STRVRYAPSPTGLQHIGGIRTALFNYFFAKSCGGKFLLRIEDTDQSRYSPEAENDLYSSLKWLGISFDEgpvvggdyAPY 81  Borrelia burgdorferi B31
P96551   3 LIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIEAFKWVGLEYDG--------EIL 74  Helicobacter pylori 2...
P04805   2 KIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDGMNWLSLEWDE--------GPY 73  Escherichia coli K-12
P43818  14 KVRTRFAPSPTGYLHVGGARTALYSWLYAKHNNGEFVLRIEDTDLERSTPEATAAIIEGMEWLNLPWEH--------GPY 85  Haemophilus influenza...
Q55778   2 TVRVRIAPSPTGNLHIGTARTAVFNWLFARHTGGTFILRVEDTDLERSKAEYTENIQSGLQWLGLNWDE--------GPF 73  Synechocystis sp. PCC...
P22250   4 EVRVRYAPSPTGHLHIGNARTALFNYLFARNQGGKFIIRVEDTDKKRNIEGGEQSQLNYLKWLGIDWDEsvdvggeyGPY 83  Bacillus subtilis sub...
P47700   3 KIRTRYAPSPTGYLHVGGTRTAIFNFLLAKHFNGEFIIRIEDTDTERNIKEGINSQFDNLRWLGVIADEsvynpgnyGPY 82  Mycoplasma genitalium...
P75114   3 KIRTRYAPSPTGYLHVGGARTAIFNFLLAKHFNGEFIIRIEDTDTERNVEGGIESQLENLRWLGIIPDEsiynpgnyGPY 82  Mycoplasma pneumoniae...
P48525  44 PVRTRFAPSPTGFLHLGSLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDE--------TPI 115 Saccharomyces cerevis...
O25360   1 --MLRFAPSPTGDMHIGNLRAAIFNYIVAKQQYKPFLIRIEDTDKERNIEGKDQEILEILKLMGISWD---------KLV 69  Helicobacter pylori 2...
O51345  82 VQSQRSAIYKQYAKYLIESGHAYYCYCSPERLERIKk--iQNINKMPPGYDRHCRNLSNEEvenalIKKIKPVVRFKIPL 159 Borrelia burgdorferi B31
P96551  75 YQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALRe--eQKARKETPRYDNRYRDFKGTP-----PKGIEPVVRIKVPQ 147 Helicobacter pylori 2...
P04805  74 YQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALRe--eQMAKGEKPRYDGRCRHSHEHH-----ADDEPCVVRFANPQ 146 Escherichia coli K-12
P43818  86 YQTKRFDRYNQVIDEMIEQGLAYRCYCTKEHLEELRh--tQEQNKEKPRYDRHCLHDHNHS-----PD-EPHVVRFKNPT 157 Haemophilus influenza...
Q55778  74 FQTQRLDHYRKAIQQLLDQGLAYRCYCTSEELEQMRe--aQKAKNQAPRYDNRHRNLTPDQeqalrAEGRQPVIRFRIDD 151 Synechocystis sp. PCC...
P22250  84 RQSERNDIYKVYYEELLEKGLAYKCYCTEEELEKERe--eQIARGEMPRYSGKHRDLTQEEqekfiAEGRKPSIRFRVPE 161 Bacillus subtilis sub...
P47700  83 LQSQKLAVYKKLAFDLIEKNLAYRCFCSKEKLESDRk--qAINNHKTPKYLGHCRNLHSKKitnhlEKNDPFTIRLKINN 160 Mycoplasma genitalium...
P75114  83 IQSQKLATYKKLAYELVGKGLAYRCFCTKEKLEHERq--lALEHHQTPKYLGTCRNLHSKHiqtnlDNQVPFTIRLKINQ 160 Mycoplasma pneumoniae...
P48525 116 KQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRhsamELKPPSMASYDRCCAHLGEEEiksklAQGIPFTVRFKSPE 195 Saccharomyces cerevis...
O25360  70 YQSHNIDYHREMAEKLLKENKAFYCYASAEFLEREKe--kAKNEKRPFRYSDEWATLEKDK------H-HAPVVRLKAPN 140 Helicobacter pylori 2...
O51345 160 EGDTSFDDILLGRITWANKDISp-----DPVILKSD-------GLPTYHLANVVDDYLMKITHVLRAQEWVSSGPLHVLL 227 Borrelia burgdorferi B31
P96551 148 NEVIGFNDGVKGEVKVNTNELD------DFIIARSD-------GTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVL 214 Helicobacter pylori 2...
P04805 147 EGSVVFDDQIRGPIEFSNQELD------DLIIRRTD-------GSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINI 213 Escherichia coli K-12
P43818 158 EGSVVFDDAVRGRIEISNSELD------DLIIRRTD-------GSPTYNFCVVVDDWDMGITHVVRGEDHINNTPRQINI 224 Haemophilus influenza...
Q55778 152 DRQIVWQDQIRGQVVWQGSDLGg-----DMVIARASenpeeafGQPLYNLAVVVDDIDMAITHVIRGEDHIANTAKQILL 226 Synechocystis sp. PCC...
P22250 162 GKVIAFNDIVKGEISFESDGIG------DFVIVKKD-------GTPTYNFAVAIDDYLMKMTHVLRGEDHISNTPKQIMI 228 Bacillus subtilis sub...
P47700 161 EAEYSWNDLVRGQITIPGSALT------DIVILKAN-------GVATYNFAVVIDDYDMEITDVLRGAEHISNTAYQLAI 227 Mycoplasma genitalium...
P75114 161 DAEFAWNDQVRGKITIPGNSLT------DIVLLKAN-------GIATYNFAVVIDDHDMEITDVLRGAEHISNTAYQLAI 227 Mycoplasma pneumoniae...
P48525 196 RY-PTFTDLLHGQINLQPQVNFndkrydDLILVKSD-------KLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIAL 267 Saccharomyces cerevis...
O25360 141 HA-VSFNDAIKKEVKFEPDELD------SFVLLRQD-------KSPTYNFACACDDLLYKISLIIRGEDHVSNTPKQILI 206 Helicobacter pylori 2...
O51345 228 YKAFKWK-PPIYCHLPMVMGNDG-QKLSKRHG--STALRQFIEDGYLPEAIINYVTLLGWSYDd-----KREFFSKNDLE 298 Borrelia burgdorferi B31
P96551 215 YKALNFK-IPNFFHVPMILNEEG-QKLSKRHG--ATNVMDYQEMGYLKEALVNFLARLGWSYQ------DKEVFSMQELL 284 Helicobacter pylori 2...
P04805 214 LKALKAP-VPVYAHVSMINGDDG-KKLSKRHG--AVSVMQYRDDGYLPEALLNYLVRLGWSHG------DQEIFTREEMI 283 Escherichia coli K-12
P43818 225 LKAIGAP-IPTYAHVSMINGDDG-QKLSKRHG--AVSVMQYRDDGYLPEALINYLVRLGWGHG------DQEIFSREEMI 294 Haemophilus influenza...
Q55778 227 YEALGGA-VPTFAHTPLILNQEG-KKLSKRDG--VTSIDDFRAMGFLPQAIANYMCLLGWTPPd----sTQEIFTLAEAA 298 Synechocystis sp. PCC...
P22250 229 YQAFGWD-IPQFGHMTLIVNESR-KKLSKRDEsiIQFIEQYKELGYLPEALFNFIGLLGWSPVg-----EEELFTKEQFI 301 Bacillus subtilis sub...
P47700 228 YQALGFKrIPRFGHLSVIVDESG-KKLSKRDEktTQFIEQFKQQGYLPEALLNFLALLGWHPQy-----NQEFFNLKQLI 301 Mycoplasma genitalium...
P75114 228 NQALGYQrIPRFGHLSVIVDKSG-KKLSKRDTktIQFIEQFKQEGYLPEAVVNFLALLGWNSDf-----NREFFTINQLI 301 Mycoplasma pneumoniae...
P48525 268 YNAFGWA-CPKFIHIPLLTTVGD-KKLSKRKG--DMSISDLKRQGVLPEALINFCALFGWSPPrdlaskKHECFSMEELE 343 Saccharomyces cerevis...
O25360 207 QQALGSNdPIVYAHLPIILDEVSgKKMSKRDE--ASSVKWLLNQGFLPVAIANYLITIGNKVP-------KEVFSLDEAI 277 Helicobacter pylori 2...
O51345 299 QFFSIEKINKSPAIFDYHKLDFFNSYYIRE--KKDEDLFNLLLPFFQKkgyvsKPSTLEENQk-LKLLIPLIKSRIKKLS 375 Borrelia burgdorferi B31
P96551 285 ELFDPKDLNSSPSCFSWHKLNWLNAHYLKN--QSVQELLKLLKPFSFS-----DLSHLNPTQ--LDRLLDALKERSQTLK 355 Helicobacter pylori 2...
P04805 284 KYFTLNAVSKSASAFNTDKLLWLNHHYINA--LPPEYVATHLQWHIEQe----NIDTRNGPQ--LADLVKLLGERCKTLK 355 Escherichia coli K-12
P43818 295 NYFELDHVSKSASAFNTEKLQWLNQHYIRE--LPPEYVAKHLEWHYKDq----GIDTSNGPA--LTEIVTMLAERCKTLK 366 Haemophilus influenza...
Q55778 299 EQFSLERVNKAGAKFDWQKLDWINSQYLHA--LPAAELVPLLIPHLEAg---gHQVDPDRDQawLVGLATLIGPSLTRLT 373 Synechocystis sp. PCC...
P22250 302 EIFDVNRLSKSPALFDMHKLKWVNNQYVKK--LDLDQVVELTLPHLQKag-kvGTELSAEEQewVRKLISLYHEQLSYGA 378 Bacillus subtilis sub...
P47700 302 ENFSLSRVVSAPAFFDIKKLQWINANYIKQ--LTDNAYFNFIDNYLDv-----KVDYLKDKN---REISLLFKNQITHGV 371 Mycoplasma genitalium...
P75114 302 ESFTVNRVVGAPAFFDIKKLQWINAHYIKE--LSDNAYFNFIDNYLTi-----DFDYLKNKR---KEVSLLFKNQLAFGI 371 Mycoplasma pneumoniae...
P48525 344 TIFNLNGLTKGNAKVDDKKLWFFNKHFLQKriLNPSTLRELVDDIMPSlesiyNTSTISREK--VAKILLNCGGSLSRIN 421 Saccharomyces cerevis...
O25360 278 EWFSLENLSSSPAHFNLKYLKHLNHEHLKL--LDDDKLLELTSIKDKN----------------LLGLLRLFIEECGTLL 339 Helicobacter pylori 2...
O51345 376 DALNMTKFFYEDIKSWNLDEFLSRkKTaKEVCSILELIKPILEGFEKRS-SEENDKIFYDFAESNGFKLGEILLPIRIAA 454 Borrelia burgdorferi B31
P96551 356 ELALKIDEVLIAPVEYEEKVFKKL-NQ-ALVMPLLEKFKLELNKANFND-ESALENAMRQIIEEEKIKAGSFMQPLRLAL 432 Helicobacter pylori 2...
P04805 356 EMAQSCRYFYEDFAEFDADAAKKH-LR-PVARQPLEVVRDKLAAITDWT-AENVHHAIQATADELEVGMGKVGMPLRVAV 432 Escherichia coli K-12
P43818 367 EMARSSRYFFEEFETFDEAAAKKH-FK-GNAAEALAKVKEKLTALSSWD-LHSIHEAIEQTAAELEVGMGKVGMPLRVAV 443 Haemophilus influenza...
Q55778 374 DAATESQLLFGDRLELKEDGQKQ--LAvEGAKAVLEAALTFSQNTPELT-LDEAKGEINRLTKELGLKKGVVMKSLRAGL 450 Synechocystis sp. PCC...
P22250 379 EIVELTDLFFTDEIEYNQEAKAVL-EE-EQVPEVLSTFAAKLEELEEFT-PDNIKASIKAVQKETGHKGKKLFMPIRVAV 455 Bacillus subtilis sub...
P47700 372 QINELIRESFATKIGVENLAKKSH-ILfKNIKLFLEQLAKSLQGLEEWK-AEQIKTTINKVGAVFNLKGKQLFMPIRLIF 449 Mycoplasma genitalium...
P75114 372 EINQLIKETFAPKLGVQHLSVKHR-ELfKELQSALQQLSEQLQALPDWT-KDNVKSTLTQIGEQFNLKGKKLFMPLRLIF 449 Mycoplasma pneumoniae...
P48525 422 DFHDEFYYFFEKPKYNDNDAVTKFlSK--NESRHIAHLLKKLGQFQEGTdAQEVESMVETMYYENGFSRKVTYQAMRFAL 499 Saccharomyces cerevis...
O25360 340 ELREKISLFLEPKDIVKTYENED-------FKERCLALFNALTSMDFQA-YKDFESFKKEAMRLSQLKGKDFFKPLRILL 411 Helicobacter pylori 2...
O51345 455 LGSKVSPPLFDSLKLIG-KSKVFERIKlaqEFLRI 488 Borrelia burgdorferi B31
P96551 433 LGKGGGIGLKEALFILG-KTESVKRIE---DFLKN 463 Helicobacter pylori 26695
P04805 433 TGAGQSPALDVTVHAIG-KTRSIERINkalDFIAE 466 Escherichia coli K-12
P43818 444 TGSGQSPSMDVTLVGIG-RDRVLARIQraiDFIHA 477 Haemophilus influenzae Rd KW20
Q55778 451 MGTVQGPDLLQSWLLLQqKGWATTRLT---QAIAA 482 Synechocystis sp. PCC 6803 substr. Kazusa
P22250 456 TGQTHGPELPQSIELIG-KETAIQRLK---NI--- 483 Bacillus subtilis subsp. subtilis str. 168
P47700 450 TNKEHGPDLAHIIEIFD-KESAINLIK---QFINA 480 Mycoplasma genitalium G37
P75114 450 TNKEHGPDLAGIMVLHG-KTQVLALLQ---EFIHA 480 Mycoplasma pneumoniae M129
P48525 500 AGCHPGAKIAAMIDILG-IKESNKRLSeglQFLQR 533 Saccharomyces cerevisiae S288c
O25360 412 TGNSHGVELPLIFPYIQsHHQEVLRLKa------- 439 Helicobacter pylori 26695
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