4TVX


Conserved Protein Domain Family
casC_Cse4
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TIGR01869: casC_Cse4 
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CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI
CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.
Links
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Statistics
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PSSM-Id: 273843
Aligned: 7 rows
Threshold Bit Score: 409.2
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4TVX_F         3 NFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSGyyaQNI-G----ESSLRTIHLAQLRDVLRQ 77  Escherichia col...
ZP_00056830    2 TFVDIHAIQTLPYSNINRDDLGSPKTVVYGGKERTRVSSQSWKRAVRHEV---EARlG----DKAVRTRRIISEIAKRLR 74  Thermobifida fusca
Q46899         3 NFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSGyyaQNIg-----ESSLRTIHLAQLRDVLRQ 77  Escherichia col...
ZP_00014240    5 RFLQIHSLHSYTAALLNRDDSGLAKRLTYGGSNRTRISSQCLKRHWRMAEhdpHALqTlggyVGSFRSRELVTDLVIKPL 84  Rhodospirillum ...
WP_001521157   3 TFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSAlfeQALaG----HIGIRSGRIAREAATILI 78  Escherichia coli
ZP_00091907    3 LFVEFHLIQNFAPSNLNRDDTGAPKDALFGGYRRARVSSQCFKRAIRLAAqahELVaPe---HCGVRTKKLLGLLLERLE 79  Azotobacter vin...
WP_010933631   9 QRIEFHILQSFPVTCLNRDDVGAPKTAMVGGSTRARVSSQCWKRQVRLem--hELGv-----RLGIRSKKVADYVAKACV 81  Chlorobaculum t...

4TVX_F        78 KLGER--------FDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKA---------EADNLDDKKLL 140 Escherichia col...
ZP_00056830   75 ERGWDadl---adAGARQVVLSVGKKSGIKLEKEKDSEAPATSVLFYLPVPAIDELAAIAd-------eHRDAVAKEAAK 144 Thermobifida fusca
Q46899        78 KLGER--------FDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKA---------EADNLDDKKLL 140 Escherichia col...
ZP_00014240   85 EGRYPqdildvlePEFQKLVYGDKADKGKKSRQTLLLGQPELAWLARRAEELAAGANDAKa--------LQKAVADWRKD 156 Rhodospirillum ...
WP_001521157  79 EKGIEekk---aiEWAAKIADYLGKAKNDKKPKDPLTNA-ETEQLVHISPAEFDAVKALA---------HQLAEEKRAPK 145 Escherichia coli
ZP_00091907   80 HRDPQear---rrIETALGAAGLKLKDDGKTEYLLFLGEGEIAGFAALIEQHWDELAAAQaggekkgkkEARASAPAELV 156 Azotobacter vin...
WP_010933631  82 ALGAD---------DEAAKACGEKIAAAFSNDTLFFFSETEASAYAQYAAEK--EFDAAK-------------FNDKELA 137 Chlorobaculum t...

4TVX_F       141 KVLKEDIAAIRvnl---qqGVDIALSGRMATSgmmTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQ----GSAH 213 Escherichia col...
ZP_00056830  145 KTPKGILPADRitevlksrNVSVNLFGRMLAE---LPSTEVDGAVQFAHAFTVHGTTVEVDFFTAVDDIPKEnd-hGSGH 220 Thermobifida fusca
Q46899       141 KVLKEDIAAIRvnl---qqGVDIALSGRMATSgmmTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQ----GSAH 213 Escherichia col...
ZP_00014240  157 ANFKAMSENAAlp-----gGLVAALFGRMVTS---DPAANIDAPVHVAHAFTVHAEEAEGDYFTAVDDLKKDesdsGADT 228 Rhodospirillum ...
WP_001521157 146 EEDLALLRKDRm-------AVDIAMFGRMLAN---KPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQAsedaGAGH 215 Escherichia coli
ZP_00091907  157 KKAKALLDGGK--------AVDVALFGRMLAD---LPEVNQDAACQVAHAISTHRVEREFDYFTAVDDEGAPee-tGAGM 224 Azotobacter vin...
WP_010933631 138 KLSKKTLDPAKd-------GLDIALFGRMVAQ---AAELNVEAAASFAHAISTHKVSNEVEFFTALDDL--Aee-pGSAH 204 Chlorobaculum t...

4TVX_F       214 LGTQEFSSGVFYRYANINLAQLQENLGgAsREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFS-DMPLSMAN 292 Escherichia col...
ZP_00056830  221 MNAGQFSAGTFYRYANVNLDRLVENTG-D-AQTARTAVAEFLRAFLSTVPSGKQNATAAMTLPDLVHIAVRfDRPISFAP 298 Thermobifida fusca
Q46899       214 LGTQEFSSGVFYRYANINLAQLQENLGgAsREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFS-DMPLSMAN 292 Escherichia col...
ZP_00014240  229 IQETELTSGLFYGYVVIDLPGLIGNCGgD-KEIAAQVVNNLVYLIAEVSPGAKLGSTAPYGRADLMLIEAGdRQPRSLAT 307 Rhodospirillum ...
WP_001521157 216 LGETGFGSALFYTYICIDKDLLVENLGgD-EALANQTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGtEQPRSLAA 294 Escherichia coli
ZP_00091907  225 IGQVEFNSATFYRYAVVDAHKLLSNLQgD-RELTLAALEAFTQAKVRAIPAGKQNSFAAHNLPAFVGVCLRhANPLNLAN 303 Azotobacter vin...
WP_010933631 205 MGSLEFNSATYYRYVSLDLGQLSANLGg---ADIADAVEAFTKALFVAVPSARQTTQSGASPWEFAKIYIRkGQRLQVP- 280 Chlorobaculum t...

4TVX_F       293 AFEKAVKAKDGFLQ--P--SIQAFNQYWDRVANGY 323 Escherichia coli K-12
ZP_00056830  299 AFETALYGSDGYTL--R--ACQELNNYAERLREVW 329 Thermobifida fusca
Q46899       293 AFEKAVKAKDGFLQ--P--SIQAFNQYWDRVANGY 323 Escherichia coli K-12
ZP_00014240  308 AYRKAIAPDREQ-------AVAALDGCLAKLDATY 335 Rhodospirillum rubrum
WP_001521157 295 AFYEPINGTRQLDV-----AVQRITTLRENMNTVY 324 Escherichia coli
ZP_00091907  304 AFEKPISPGHDQAL--SslSVAELAGHEEKLAGVY 336 Azotobacter vinelandii
WP_010933631 281 -FETPVKAERGGGFlqP--SIKALTDYLTKKEQQA 312 Chlorobaculum tepidum
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