4JWO


Conserved Protein Domain Family
PBP2_phosphate_like_2

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cd13654: PBP2_phosphate_like_2 
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Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily.
This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.
Statistics
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PSSM-Id: 270372
Aligned: 31 rows
Threshold Bit Score: 282.221
Created: 19-Sep-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:putative chemical substrate binding site [chemical binding site]
Evidence:
  • Comment:based on sequence similarity to other members of the phosphate-binding protein family.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #                                                         #             
4JWO_A     60 SGTIAVDGSSTvFPISQAVAEEFEGkf-----peVKLTVAXs-GTGGGFKKFIAEEi----DVTGASrPITEKEAaecka 129 Planctomyces limno...
NP_279518  45 SGTVDFAGSSTvFPLATTMSEAFRGgdtgeahpdVNFNPKStgTGGGFANHFCTGNa----DLNNASrEVRDAEAqqctd 120 Halobacterium sp. ...
NP_694058  47 EGSVAIDGSGTvYPLMARLAEEYMIneq----pgVSVEVSRa-GTSAGFEKFLAENg---tDFNDASrLIKEEEQakade 118 Oceanobacillus ihe...
YP_662878  25 RDYIDVVGSSTvYAFSTVVAERFGKts-----pfHTPKIESt-GSGGGLKLFCQGVgmkfpDIANSSrRIKPSEIdlcqr 98  Pseudoalteromonas ...
CAM77095   24 RDQIRVVGSSTvYPFTTAVAEQFGKag-----kfKTPVVESt-GTGGGFKLFCAGVgpdhpDLTNASrAIKKSEMescak 97  Magnetospirillum g...
ABC22835   35 RSQARIVGSSTmFALTAAVAERLSRlg-----lgQAPLVEVt-GTGAGFHRFCAGIgletpDLVAASrTMTDQERarcra 108 Rhodospirillum rub...
ACZ49536   23 ADQIRVVGSSTvFPFISSVAEEFGRfs-----ayRTPVIESv-GSGMGFNMFCAGSgrgtpDIAMSSrRIKDAEVelcgn 96  Anaplasma centrale...
Q8CP98     35 KGSAKGEGSSTvAPIVEKLNEKWAKdh-----kdAKISSGQa-GTGAGFQKFIAGEt----DFSDASrPIKDEEKkkled 104 Staphylococcus epi...
YP_520351  49 SGDVIIDGSGTvYPLMSHIAENYMTsvq----pdVNVQVGRa-GSSAGFKKFIPGEl----DFSDASrKIKSEEVdelka 119 Desulfitobacterium...
AAU90790   27 RPYLLIAGSSTiFPLASAVADHVSAsg-----kiRKPKVESt-GTGGGIKLFCEGTgrnypDIVLASrMMKKVEReecgl 100 Methylococcus caps...
Feature 1                                                                                     
4JWO_A    130 ----kgidYVEFQVAiDGLTVVINPANtfaecxt--------------vaelnkiWAADSKVSKWSEVregwPDEPIQLF 191 Planctomyces limno...
NP_279518 121 ----ndiePVEFTVAtDALTVIVNTDLdidsitv---------------delrsiWSAERDTEQWSDVnpdwPDEPLELY 181 Halobacterium sp. ...
NP_694058 119 ----lgidVKELKVAlDGLTIVTHPDNdwatel----------------tqeqvqGIFLGEYTNWSDIdsswPDQPIQTY 178 Oceanobacillus ihe...
YP_662878  99 ---ngvheVIEILIGfDGIVLAQSKLAesipltrrelyla---laksvpnpdgsaTTIDNPFITWQDInprlPNIEIEVF 172 Pseudoalteromonas ...
CAM77095   98 ---ngvtdVVEMKVGyDGIVLAASKKAkhidvtrkqlf------lalakevpvngKLVENPYTTWNQIdpslPASKIEVL 168 Magnetospirillum g...
ABC22835  109 ---ngvddIGEIYLGhGAVVLARSWQTpfpaltrrmvw------laladevprkwALETNPNRLWSDIapglPAVPIRIF 179 Rhodospirillum rub...
ACZ49536   97 ---ngvrdMIEVGLGyDGIVVASAKQKervdfslvdlfg----alskyslsdeygKVPMNKYSMWSEVrpslPEHEIEIY 169 Anaplasma centrale...
Q8CP98    105 ----kgikYHEFKIAqDGVTIAVNKDNdfvkel----------------tksqlkDIYSGKAKTWKDVnsswPDKKINAV 164 Staphylococcus epi...
YP_520351 120 kglemgtnVLEIKLAyDGLTIVINKNNdwakemtdd----------eiikmftskAVKGDDKVLWSDIrpewPKEEVKFY 189 Desulfitobacterium...
AAU90790  101 ---ngvneITELKIGyDGIVVAQSRKDgpwnltnrdlylalakmvpdpkcsgscdRLIPNPYRKWSEVnpalPDLPIVVW 177 Methylococcus caps...
Feature 1      #   ####                                                             #         
4JWO_A    192 GADTASGTFDYFTEVIngka-----------------------------------kssRSDYTAn---sNDNILVQGVVD 233 Planctomyces limno...
NP_279518 182 GPSSASGTYDYFIESIlhggdt------------------------------elthisGGSYTGt---eQDRTIIQGVEG 228 Halobacterium sp. ...
NP_694058 179 GPNENHGTYEFFYENIlee------------------------------------qdlVETIDLq---qDYSTLVTLISQ 219 Oceanobacillus ihe...
YP_662878 173 GPPSTSGTRDAFSELVldygchtfawlaqmsepqsqaqatskearirksqqrrlcrmlREDGAYidageNDNLVVQKLNA 252 Pseudoalteromonas ...
CAM77095  169 GPPPTSGTRDAFLELVmesgaeafpeikelk-------------ktdekafkkvfssiREDGAYveageNDNLIVQKLDA 235 Magnetospirillum g...
ABC22835  180 GPPPSSGTRDYLASALmdpgclafpllae----------------rpaaeretacrrlREDGAFieageDDDRLVKRLVD 243 Rhodospirillum rub...
ACZ49536  170 GPHKNTGTYDILVDTAisgvcmsaknfvds--------------ypnleerkkvcssiRNDGKYievatSENVVIHKISK 235 Anaplasma centrale...
Q8CP98    165 SPNSSHGTYDFFEEEVmd--------------------------------------kqDIKAEKn---aDTNAIVSSVTK 203 Staphylococcus epi...
YP_520351 190 GPNENHGTYEFFYETIlgk------------------------------------kdlVASVNLq---qEYPTLVDLVSK 230 Desulfitobacterium...
AAU90790  178 GPPLSSGTRDTFAEDVleagcagfpamkqmm-------------lanearfkklcqsiREDGVYes--ePESSIIDHVAS 242 Methylococcus caps...
Feature 1                                                                                     
4JWO_A    234 SkGALGYFGYAYFAENaskLKAVKIsdgkkavcveptpatiesgeyTPLSRPLFIYTTKAkl--krPEVAEFIKFLLSek 311 Planctomyces limno...
NP_279518 229 StNAMGYLGYAYYSKSddrVKALAVddgdgepvkp-sletarsgayTPLSRPLFTYAAKSsl--aePAVAAFLRFWLEha 305 Halobacterium sp. ...
NP_694058 220 DeNAIGFFGFGYYDSNkdsIQAVNIdfgdgpveps-ldtiaedgdyAGFTRPVFTYLNVGnaq-ekPQVLDYAIYIMNnv 297 Oceanobacillus ihe...
YP_662878 253 NpNALGLLGFSFLDQNrdrIKSAKIdgflpsf-------ssiangdYPISRPLYFYVKKAhig-miPGIEAFIREFISd- 323 Pseudoalteromonas ...
CAM77095  236 NaNAFGIFGYSFLDQNsdkLQGSMVdgvaptf-------eaiaagkYPVSRPLFVYAKKAhvg-qiPGIKEYLAEYTSe- 306 Magnetospirillum g...
ABC22835  244 DpTAVGFIGYAAFHRNghlVSAIPIegiapti-------etitegsYPLTTQLILYVKTAhlg-liSGLDRYVQAFTAe- 314 Rhodospirillum rub...
ACZ49536  236 NsNAFGILSFSFLVKNqgeIQGNRIagvepsy-------dtissgkYVLSRPIYIYVKKEhld-ttPGLKEFVKEVMRp- 306 Anaplasma centrale...
Q8CP98    204 NkEGIGYFGYNFYEQNkdkLKEVKIkddngkvtep--tkktiqngsYALSRPLFIYAKDKslk-dnKVMSEFMKFVLEde 280 Staphylococcus epi...
YP_520351 231 DkNAIAFFGYGYYASNtdkLTAVKVdfgkgpvape--lktigedldYAGFTRLVYTYLNLnyakekPQVLDYAKYVVSne 308 Desulfitobacterium...
AAU90790  243 G-HGLGIIDFGVLAKHrseLVAAPIegiepty-------esvksqrYPVGRPLYMYVKQAhlg-laPGMEAYLKEFTSd- 312 Methylococcus caps...
Feature 1                
4JWO_A    312 --gdQLVEEVK 320 Planctomyces limnophilus DSM 3776
NP_279518 306 tseaIVADQVG 316 Halobacterium sp. NRC-1
NP_694058 298 ---nTFAGETG 305 Oceanobacillus iheyensis HTE831
YP_662878 324 ----NASGESG 330 Pseudoalteromonas atlantica T6c
CAM77095  307 ----KAWGKSG 313 Magnetospirillum gryphiswaldense MSR-1
ABC22835  315 ----QAIGEDG 321 Rhodospirillum rubrum ATCC 11170
ACZ49536  307 ----ESIGSSG 313 Anaplasma centrale str. Israel
Q8CP98    281 ---gKAAEDAG 288 Staphylococcus epidermidis ATCC 12228
YP_520351 309 g-akKLAADNG 318 Desulfitobacterium hafniense Y51
AAU90790  313 ----RAWGDEG 319 Methylococcus capsulatus str. Bath

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