Conserved Protein Domain Family
HNH_repeat

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pfam18780: HNH_repeat 
Homing endonuclease associated repeat
This entry represents a 60 residue repeat of unknown function found associated with homing endonuclease domains.
Statistics
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PSSM-Id: 465866
Aligned: 215 rows
Threshold Bit Score: 36.7916
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
SDO71539                 66 ITDEELLQHIRDFSNEFKRPPTTADFEncnsrYphtkTYYRhfkyYKKEnkLSSWNDILLLAGVT 130
OUO44686                185 DDELRMLQELRALAKRLNRSPLRSEMEqvlreS------------LLRR--FGSWRNVLYQIDLE 235
WP_067532195            191 PQYVQMLDNVKAFAYELGRSPIHGEIDaevkrA------------LIRR--CGSWRNALYQVGLE 241 Emergencia timonensis
CDC43209                177 PEYEQDLEIVKAMAEKLHRAPFMQEFPeefreE------------LIER--CGSYRNTLYQIGLK 227
PRJNA515183:EQM06_04165 118 LLEKELLDKLRVKAEELGRPPHMHEMReva-------------dyFKIK--FSTWAELLDAAGLD 167
RHV87715                 32 REDQVMLAVVIRRAERLGFSPTQKEVP----------NAEA----LKKR--FGNWTKVMTAAGLP 80 
WP_067532195            125 KHLELLLAKIREKALELGKIPHPKDIPdvc-------------aeIKKY--YNDWGRVIEAADID 174 Emergencia timonensis
WP_087341156            121 EEYQHMLDQVRSMAEQLGRIPHPSELPeic-------------rkLKKR--YRTWGEVLAAAGVE 170 Flavonifractor sp. ...
WP_128745137            126 KQCEEIFDKIRKKAEELKRPPHMGEMQdci-------------egLKYK--FDTWNQVLEAAGIN 175 Aminipila luticellarii
SCJ30536                180 PEYRAMLEKLLEQARALGRAPLRSEVEepfrkK------------LIAR--CGSWRNTLYQIGLE 230 uncultured Clostrid...
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