Conserved Protein Domain Family
DUF5960

?
pfam19385: DUF5960 
Family of unknown function (DUF5960)
This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000561) is described by MIBiG as an example of the following biosynthetic class, RiPP (ribosomally synthesized and post-translationally modified peptide).
Statistics
?
PSSM-Id: 466064
Aligned: 51 rows
Threshold Bit Score: 71.0529
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EOH86268                4 IYRRRIKEPHDQLIVDFHKYVD-TDIPFYAIKEDVLFLMIKHNRTHFSIPAALTKRkQNDIYFCFEIEECkinisfkkdq 82 
RST96147                3 AQFKHQDPSMEQWWKDYNAYIN-TSVPLFVVVNEIVELMDKNNTDYYKVPKRHTRN-GKDVYFKFNSKVYdqdn-----i 75 
WP_071874838           15 LLFKY-GESYNRFTDEYYHYVK-SNTPVCFIENDLLKLMYKNGIDYFRVPKNKTLV-GHDIAFVFKRSEEnk-------- 83  Entero...
RSU11150                3 SVLEYQTDKAKEFFELFFKYVE-TDIPFFIHERDILLTMDKNNSNYFRVPRRHSAN-QRELYFYFDIIYLkenk------ 74 
WP_016176414            8 HLLWFKYDPSEKFVKDLYKVWD-TEVVFLAIETSLLVNLHYSNKNYFKIPAAKTRM-KKDVYFLFDVVTNvpdvr----a 81  Entero...
Prjna32935:ECBG_00367   4 AKIAYAKQETYAFEKHYYELVN-FPTPVALLFDEFALTMERNQKSYIAIPARYSVL-KVPLVFVFRLETKda-------- 73 
RSU08420                6 VDIAFHCAETEAFEKHYYELVS-FPIPLLFHQESIVKTMQNTQKDYFIVPRKYSVT-GKDLIFHFRKEIQdd-------- 75 
OJG19153                2 IMMEFFKEQ-DAFMTDYKKVAK-TPLPLAEIAETVKTQLDRTQANHFRLPGSKTVD-GKVHAFPFDRTILtdend---gt 75 
WP_067482314            1 MEKEYFNQQ-AAFLKDYQKFAKqNNETIDQLADQVIEELNKTQANHFTLAKENAVD-GKSHCFPFSRRVYadend---gt 75  Entero...
WP_005875845            1 MEKEYFVQQ-EAFMEDYQQLAAqKDVTIESLADKIINQLNQTQEDYYEMPAEEAKD-GVSHRFPFSRRIYsdend---gt 75  Entero...
EOH86268               83 kyyLYKYKGVQ 93 
RST96147               76 pykLFTYERVY 86 
WP_071874838           84 -itMFEFIEVQ 93  Enterococcus aquimarinus
RSU11150               75 nikLYRFDHLE 85 
WP_016176414           82 khkRFDYVKYT 92  Enterococcus durans
Prjna32935:ECBG_00367  74 --pVYYYEHVL 82 
RSU08420               76 -ctLYYYRGVS 85 
OJG19153               76 lstVYTYTGEP 86 
WP_067482314           76 lntSYTYEGEP 86  Enterococcus
WP_005875845           76 lntEYTYEGEP 86  Enterococcus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap