Conserved Protein Domain Family
vWA_BatA_type

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cd01467: vWA_BatA_type 
VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.
Statistics
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PSSM-Id: 238744
Aligned: 10 rows
Threshold Bit Score: 209.108
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
metal
Feature 1:metal ion-dependent adhesion site (MIDAS)
Evidence:
  • Comment:divalent cations are bound by the MIDAS motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                # # #                                                                  
O51195       98 AGADIVIVLDISPSMGAVEFs-----SKNRLEFSKELIRGFISQRENDNIGLVAFAKDASIVVPITTDREFFNKKLDDIy 172 Lyme disease spi...
AAD30859     88 KGVEVMIALDISNSMLAQDV------QPSRLEKAKRLISKLVDGMENDKVGMIVFAGDAFTQLPITSDYISAKMFLESIs 161 Bacteroides frag...
NP_714598    92 EGVDILIALDVSGSMSRSRDf----lPETRLGVSKKLLKRFIEKRNNDRLGLVVFAGAAYLQAPLTGDRESLSEILETIe 167 Leptospira inter...
NP_762140    97 LGRDVMVVVDLSGSMAEQDFtsasgaKISRLDATKEVLADFAKTRQGDRLGLILFGDAAFVQTPFTADQKVWLALLNQTd 176 Vibrio vulnificu...
ZP_00022787 129 PVRDLLLALDLSQSMDTRDFktpsgvLEPRVDAVRQVVADFVARRTGDRIGLIVFGDAPYPLAPFTLDHALVRELLADMv 208 Ralstonia metall...
NP_718656    82 QGRDLMLAVDLSGSMQIEDMvid-gkVVDRFTLIQHVVSEFIERRKGDRIGLILFADHAYLQAPLTQDRRSVAQFLKEAq 160 Shewanella oneid...
NP_643683    85 EARQMMLAVDLSGSMSEPDMvlg-gkVVDRLTAAKAVLSDFLDRRDGDRVGLLVFGQRAYALTPLTADLTSVRDQLRDSv 163 Xanthomonas axon...
NP_809820    86 EGIDIMLAIDVSTSMLAEDL------KPNRLEAAKDVAAEFINGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIk 159 Bacteroides thet...
NP_663149    96 VGIDIMIALDVSDSMNTPDFg-----GKSRFAGARTAAMRFIDNRPADRIGLVVFSGGSFTRCPLTLDHEVLGRLAETVa 170 Chlorobium tepid...
ZP_00119123 110 EGINMIFAIDVSESMKITDI------HPSRFDAAKQICTDIINKRSNDRIGIVIFSGEAVTLSPLTNDYVLLKNQLNDLk 183 Cytophaga hutchi...
Feature 1               #                                   #                                   
O51195      173 -iMDLGNGSALGLGISIALSHLKHSEALK--------RSIVVLTDGVVNSDEIXKDQvINLAQgLNVKIYSIGIGsseef 243 Lyme disease spi...
AAD30859    162 psLISKQGTAIGAAINLAARSFTPQEGVG--------RAIVVITDGENHEGGAVEAA-KEAAK-KGIQVNVLGVG----- 226 Bacteroides frag...
NP_714598   168 eeTVTEQGTAIGDAIILSTYRLRNSKARS--------KVIVLITDGVSNTGKIDPVTaTDLAEqIGAKIYSVGIG----- 234 Leptospira inter...
NP_762140   177 -vAMAGQSTHLGDAIGLAIKVFEQSEPSQaafskprqKVAIVLTDGNDTGSFVEPIDaAKVAKaKGVRIHVIAMGd---- 251 Vibrio vulnificu...
ZP_00022787 209 -pGMAGASTSLGDAIGLGIKMFDQSHAQE--------KVMILLTDGNDTASRMPPAQaADIAKtRGVVVHTVGIGd---- 275 Ralstonia metall...
NP_718656   161 -iGLVGKQTAIGESIALAVKRFDKMDESN--------RVLVLLTDGSNNAGNIEPQQaAQIAAnRKVTIYTVGVGadvme 231 Shewanella oneid...
NP_643683   164 -vGLAGRETAIGDAIALSVKRLREQKQGQ--------RVVVLLTDGVNTAGVLNPLKaAELAKaEGVRVHTIAFGgsggy 234 Xanthomonas axon...
NP_809820   160 -cGLIEDGTAVGMGVANAVTRLKDSKAKS--------KVIILLTDGTNNKGDISPLTaAEIAKsFGIRVYTIGVGtngm- 229 Bacteroides thet...
NP_663149   171 pgFFDEPGTAIGTAILTATNRLKASSSKE--------KALVLITDGENNAGEVTPETaARLAAnYGIRIYTVFAGkea-- 240 Chlorobium tepid...
ZP_00119123 184 qnKDLQSGTAIGTALGTAINRLKNAETKE--------RIIVLISDGENTSGLMDPITaADLCLeYNIKIYCIGLGkdgt- 254 Cytophaga hutchi...
Feature 1                                                     
O51195      244 svefklrsgkFYQGSFKEVYDpsm-lvEISNKTGGLFYSVNDDFSF 288 Lyme disease spirochete
AAD30859    227 ----------LPDGAPIPIEGsn---dFRRDREGNVIVTRLNEAMC 259 Bacteroides fragilis
NP_714598   235 ----------KEDGSYEINFEil---qELSANTGGRFFRAEDPEEM 267 Leptospira interrogans serovar lai str. 56601
NP_762140   252 ---------pSTVGESALDLQti---eRIASESGGKAFQALNRDEL 285 Vibrio vulnificus CMCP6
ZP_00022787 276 ---------pATTGEQKVDLDal---kHIASTTGGRYFFGADQTSL 309 Ralstonia metallidurans
NP_718656   232 rr--tlfgreRVNPSMDLDENql---qQIADATHGRYFRARNSEEL 272 Shewanella oneidensis MR-1
NP_643683   235 s---lfgvpiPAGGDDDIDEDgl---rKIAQQTGGRFFRARDTDEL 274 Xanthomonas axonopodis pv. citri str. 306
NP_809820   230 ------apypYPVGNTVQYINmp---vEIDEKTLTQIAGTTDGNYF 266 Bacteroides thetaiotaomicron VPI-5482
NP_663149   241 -------rafENTSNTALNRKgrseleTVARISGGRMFSAGDVFGL 279 Chlorobium tepidum TLS
ZP_00119123 255 -------hqfKDDNGTIQYVEs-----KLDENTLKNISATTKGKFY 288 Cytophaga hutchinsonii

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