2G0J


Conserved Protein Domain Family
Peptidase_Prp

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pfam04327: Peptidase_Prp 
Cysteine protease Prp
This is a family of cysteine protease that are found to cleave the N-terminus extension of ribosomal subunit L27 in eubacteria. Proteins in this family are distinguished by a pair of invariant histidine and cysteine residues with conserved spacing that form the classic catalytic dyad of a cysteine protease.
Statistics
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PSSM-Id: 461264
Aligned: 277 rows
Threshold Bit Score: 59.4943
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2G0J_D           35 MIQATFIRR-KGILESVELTGHAG-SGEYGF--DIVCAAVSTLSMNLVNALE---------V------------LADCTV 89  Streptococcu...
Q7NBB1            3 MITITF------YASAIRVSGHAF-FAEYNQ--DIVCAGVSAIVFGGINYFS---------Pea---------------- 48  Mycoplasma g...
WP_012685564      1 MIEVIVSRA-QHGIHEISISGHAN-AGAYGA--DIVCSAVSGISFGILNAIQ---------P------------LTGITP 55  Brevibacillus
ADO58088          1 MIIVRIIRLeDGSIQGFSVKGHAN-FAKSGE--DIVCAGVSAVTVGTVNSIV---------A------------LTDVEM 56 
jgi:GYMC10_1541   1 MITVQVLRGeDGRIHSFKVTGHAG-YADPGE--DIVCAGVSSITVGTVNSIE---------A------------LTGTVM 56 
WP_012242316      1 MIKYHFKKD-HGFIKGLDVKGHAL-FGEYGT--DIVCSAVSTALIVTVNAIEtlgykenfyAk-----------VEEGNF 65  Acholeplasma...
CAP18470          1 MIYYYFYKK-NKKIEKIKVFGHSL-YDK--KnnDIVCSSVSTAIILTLNNLKmlglkknidY------------ILKNGF 64 
Q6YRC8            1 MIRYCFYKE-QKKITSIQVWGHAL-YAPKGF--DIVCASVSTAIIVTLNALE---------Klqfqt--ditynLQDKLF 65  Onion yellow...
CAM11927          1 MIRYFFKKKeNEKIVTIEVCGHAL-YAPKGR--DIVCASVSTAIIVTLNALE---------MlgyqkdisfsylLEDNFF 68 
CDE26823          1 MIKYKVTKCd--DEYKIEVKGHANqNP-YGS--DIVCASVSTALIMTYNLLE---------RlnlfrcnitapvCEEGLF 66 
2G0J_D           90 slqmdefdgg-ymkidlsyiTNKSDEKVQLLFEAFLL-------------GITNLAENSPE-FVT 139 Streptococcus mutans
Q7NBB1           49 ------------------vkVIKDSQNSTIFFELLEVdsknliaidliktQLSVIASVYDQ-HIK 94  Mycoplasma gallisepticum
WP_012685564     56 dvavaqegggflkwslsssdDETAREKQQLLAESMVI-------------ALLSVEANYGK-YVK 106 Brevibacillus
ADO58088         57 etemengfl---saylspenYHDANAQVQLLLESMVI-------------MLTSIAESYGK-YIQ 104
jgi:GYMC10_1541  57 etrmkggfl---sanlpptaDDSVSGQVQLLLESMVV-------------MLQGIADSYGK-YIR 104
WP_012242316     66 el-----------------qiNQTNDVIEGLLINLEY-------------TLNELAAQYKT-YIK 99  Acholeplasma laidlawii
CAP18470         65 ln----------------lkILKQNSIMMVLLNNLEY-------------CFKELEKNYKK-HIK 99 
Q6YRC8           66 el----------------evKTTQNTVLFTLLDNLEY-------------TICNLAKQYPNnFkk 101 Onion yellows phytoplasma
CAM11927         69 hl----------------dvLFFDEKNIFLLLSNLEY-------------TLDNLRDQYPK-YLK 103
CDE26823         67 sl-----------------nmKLSDNTLKEILNNLSD-------------SLDMLASAYPK-YIK 100
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