6PLN


Conserved Protein Domain Family
TFA1

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COG1675: TFA1 
Transcription initiation factor IIE, alpha subunit [Transcription]
Statistics
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PSSM-Id: 441281
Aligned: 69 rows
Threshold Bit Score: 130.789
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6PLN_A         1 MG------------RDKKNTALLDIARDIG------GDEAVEVVKALEk---KGEATDEELAELTGVRVNTVRKILYALY 59 
WP_011007495   1 MKdv--------ylYIVEKSVAWEFDSPEY------GRLARKVAEMLYe--rKEDLTDDRIAILLNISTAETRRILQYLM 64 
WP_012186433   1 MQpyie-----lvrRYVYRRILIEFGDDEL------GKLAVAIFNTLLs--rGEAMTDDKLTSIVGYNAIDVRRILQALY 67 
WP_013130147   1 MVvtlp-----rkeDNALLRIAREIIGKTY------GEIALQLFDYMLe--nNGYVAEETLTKDTGIKSNEGRRVLQKMS 67 
WP_013266212   1 MSgegn----gnneDDKSLEGLRQLIRMLAvksgidEAMADDLFDLLLtvdpEKGISDEEVEQMKGYKQADVRKVFRIFY 76 
WP_013335168   1 MVedlet---slflEYARRKIAFEYDNEEM------GELAVKILKTLSe--rNEAIPDETLALILGISATEIRRILHVMH 69 
WP_014127803   1 MTeeal----naylAIVERSVSFEFNSPEY------GKLARKIIEMLYs--rREQLSDDRVAILMNISTAEARRILQFLS 68 
WP_052307197   1 MAterav--sgaprEDKLVEITILIVEKMM------GEEGRKILEFMLa--nNGLIIEETAGKDLNTKSNIVRKILQKLS 70 
WP_015232894   1 MKennnkedsnsesQVNYINQLREFVRLLAlkaetdDKMSSEILDILLktdpERGISDEEIEGITGYRQSDVRKVLRLLY 80 
WP_020962634   1 MS---------------QNEVLAELAEKIF------GEKAKKIMILLSn---HVEISDDEIAKELDMDQAELRKILNDLF 56 
6PLN_A        60 DAKLATFRRVRDDETGWYYYYWRIDTKRLPEVIRTRKLQELEKLKQMLQEETSETYYHCGTpGHPKLTFDEAFEYGFQCP 139
WP_011007495  65 RLNLVGVKKRTTEDY-RIEYTWYVDDEIIKQAIGGRARTAREKISMLIRALTEGSYYICPN-CHMRYSLDEAVNKGGVCP 142
WP_012186433  68 NMRLASVVEEFNEAAGRIEQSWSIKDEDIRRFLINLIGGVLDKVGVLMQQLTNTPIYICPK-CFKRYSEDDALMYDYKCP 146
WP_013130147  68 EEAIIVPGKLKTEDS--TLHIWVLNRVALKSFVLNRLKKAREKLEARLNYERDNIIYECPV-CGRRYSFEEAYLNDFKCV 144
WP_013266212  77 DLRIASYRRGKHPDTGATRYYWYLDSRDADLALLRRKKQVLEKLKMRLEYERSNEFYVCPK-DGTRYTFDYAYEYQFTCQ 155
WP_013335168  70 RAGLVGLVRESTDQY-RYEYKWFINKDFIRKFLIQHINNVVTKLMHRMNTLSRTTLYICPT-CFRGYTLDEVYEYDFKCP 147
WP_014127803  69 KNNMIGVVKSTTPDY-RTEYSWYVDDTVIKQALKKRIELVSSKLSMLIRGLTEGAYYVCPN-CHRRYSLDEELAYNGQCP 146
WP_052307197  71 DEAVVVPVKVKDKDK--VLHGWVLNREALANFIISRLRKSKEKLTTRIRELEENTFFICPT-CHRRFRYEEALINDFHCP 147
WP_015232894  81 DARLATYRRGKHPETGATRYYWYIDMRSVGLAIIRRKKAVLEKLKSRLIYENNNEFYKCPK-DNTRYTFDDAFEYDFICP 159
WP_020962634  57 EARLVKYRRARDENIGWYKYYWRITDEPLEVLLNDRKRLTLTILEKLLSLEEQAEIYVCPS-CGARYSVVEAEDYGYTCP 135
6PLN_A       140 ICGEILYEYDNSKIIEELKKRIEELEIELGLRS 172
WP_011007495 143 VCGAELEYVESLEEINKLTKVLQKLEKL----- 170
WP_012186433 147 LDRTPLEYINPADYLTVLGAVEARLKKMMESVS 179
WP_013130147 145 NEGADLLEANNDEVISLLESKIKELDEKIAELS 177
WP_013266212 156 KCGTMLVPEDNSSYIRVLENRISRLEEEIKRDE 188
WP_013335168 148 RDDTELVQVDVPSEITFLANVIKNLRGEEKEQ- 179
WP_014127803 147 ICKVQLIYVNNINEINKITEIIEKLEKYENNI- 178
WP_052307197 148 NDNSLLMEVDKEGELALLREKLKSLDKLLDYIH 180
WP_015232894 160 KCGSMLELDTNEQYIDILKRRISLLEEEIKQDE 192
WP_020962634 136 NCGEVLEPYDNSKRIRKIREAIQALKNYEPIAS 168
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