Conserved Protein Domain Family
tRNA_anti-like

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pfam12869: tRNA_anti-like 
tRNA_anti-like
This is a family of bacterial, archeael and viral proteins that is related to the tRNA_anti family pfam01336. The major characteriztic of families like tRNA_anti is their OB-fold, and many of them bind DNA.
Statistics
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PSSM-Id: 378982
Aligned: 8 rows
Threshold Bit Score: 109.143
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q72D10           1 MTqffgaitaiAMLAALVGIILPKqllfflqphhrtRLKAFGFYFVialacslvgtalmspeektrqaqvRQEAEAVRAV 80  Desulfovibrio...
Q0KFH4           1 ML---------NRTQQILVAIVAV------------AVLGMLWFAGndrrddv-----------gdaapeAQAEASAVPA 48  Cupriavidus n...
WP_015926374     1 MAnek---vkkSIFKRWWFWAIIV------------IIFVVVAV------------------------------NQQGDS 35  Ruminiclostri...
jgi:Sterm_0496   1 MR-------------NILVLFLTG------------FLSLAVIS-----------------------------NTVINNK 26 
WP_015482391     1 MK----------F-KKIVLPIIFL------------SIVVAVVA----------------------------Y-NVY-NK 27  Polaribacter ...
EAQ41023         1 MK-----------RKKYILVILIL------------LILMFVIKY-------------------------AFVSEDY--K 30 
Q3ZAA7           1 ME---------KTLNNKLVRALLI------------TSPLIIIALV------------------------SVGFSLNESI 35  Dehalococcoid...
ENY55754         6 ML-----------LRFRVLPLVFV------------ISLLSGCGLA------------------------SKAFYSAGDK 38  Klebsiella pn...
Q72D10          81 EKAEKERAQKAEAEAKAKAEAQALQASRISARDLWAAYDANEVAADNKYKGKRILVVGTATDI-KKdiTGSPY--VAMAV 157 Desulfovibrio...
Q0KFH4          49 SVVRGIPRDGTLDPISIDPERPADRLPQLQADTLLNDYRDNPKEADTRYLGQYLIVEGVASGI-RR--ERDQV--FVDIR 123 Cupriavidus n...
WP_015926374    36 DKTVSTNTDANSSVSKSTPTQVKEKPIVVKAEDLAATFDENEIKGNKLYKDKIAEITGTVSDI-GEslGQTYV--VLSSG 112 Ruminiclostri...
jgi:Sterm_0496  27 QKNPAVSEETKTK--------------SANTYDLLEEYKKDASKRQPTYTGENITVSGVVVYKgPDi-HGLPS--LELSD 89 
WP_015482391    28 PHVDVADAKADV---------------TVTAENLFSEFSKDEVRANTQYLDKIIQVQGLIQNL-KVe-NELGV--VTLKT 88  Polaribacter ...
EAQ41023        31 QTENLIDKTPEL---------------VLNANDLTNAYVKNEENSNKLYAGKIIEVIGIVEET-TTl-NNRNT--IILAS 91 
Q3ZAA7          36 TSLNNEDSSATAVISQPEPAEVITPPVQIAARVLYEEYISNQTAADIKYKGSLVVVQGVLSGIc----PATSTlqWVTLE 111 Dehalococcoid...
ENY55754        39 LFQPGDDAVASMQ--------------TYSVAQFLQPFTLNPAKASSDYLGKWVKVRGVIVDIrRKsgIAGSYyfIVTMR 104 Klebsiella pn...
Q72D10         158 DQFGLTGVNCIMEDEA-------------SAAKISRGAKIQVVGTVNGMS-----IGNVFLRDCQ 204 Desulfovibrio vulgaris str. ...
Q0KFH4         124 TNDPGVNVRALLLQRQicgpagrvceveaRATMVRRGQKVALECNGAGLA-----DGAPLLRDCL 183 Cupriavidus necator H16
WP_015926374   113 KDFSITNVQCFFKDDNei----------sKVAEIKKGTKVTIVGQIDGK------SINVAVNDCK 161 Ruminiclostridium cellulolyt...
jgi:Sterm_0496  90 KVNGTSHVLCVFDSAD-------------SLNKISKGDNLTISGKFHIVSs----DDMVVLKQSK 137
WP_015482391    89 E-DDFGTVQCNLSREAts---------nfKL--LKKNDLVTIKGICTGYl-----MDVVLVKSEI 136 Polaribacter sp. MED152
EAQ41023        92 E-HNSFGVICDINPNFtt---------efNQ--IQKNQKIQVKGICKGFl-----KDVILLNCSI 139
Q3ZAA7         112 TDGQNAFVKCQLSGDFtf----------lSSINDLIGQTVTIAGICQGFSgsyliIDEIYTNDLP 166 Dehalococcoides mccartyi 195
ENY55754       105 DEQNKTDKRLTFNFGShn---------saDVEALSNGSVATIVGQVHQVQd---sTIPTLQNPKV 157 Klebsiella pneumoniae subsp....
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