Conserved Protein Domain Family
YlqD

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pfam11068: YlqD 
YlqD protein
The structure of a representative of this family has been solved (pdb:4dci) and found to form a tetrameric structure of prefoldin-like architecture with the beta-barrel core and helical coiled coil tentacles. This suggests that this family may act as molecular chaperones.
Statistics
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PSSM-Id: 431635
Aligned: 64 rows
Threshold Bit Score: 91.821
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012630313      8 LLLRRAINVKAVVTPRWKEEAQQTLQAQLNQLDMQLQQLELQAQQMITEIRKQGIQivgaeglqptdnvqtQIQELQMQV 87  Cyanothece s...
WP_014015999      4 iTLRVPVAVKAKVTQALKDRILKGADQALSDIDREMQNLEFQAKRMMTEQAKIDAQ---------------GLISLRAKV 68  Megasphaera ...
CDA48302          4 MQILVPVAVKSKLTEALKTTLLNEINTNLSRVEHDMAQLEFQANGRIAEQAKVNIQ---------------AASQLRASF 68 
WP_022382030      4 MQILVPVAVKSKLTEQLKATLLAEIEQNLKRVDHDMSQLDFEANGKLAEQAKINVQ---------------AVAPLRAQY 68  Dialister ma...
WP_007070769      4 iQVLIPVAVKSKLTEALKTTLLNQINQNIKSVENDMTQLEFEANAKLAEQAKINMQ---------------AVAPLRAQY 68  Dialister in...
jgi:TherJR_2048   5 LTILRQVTVKAKVTEKFKNTMAAQIQDAIRKIDLELQNIDFQLKRTVAELEKQNPA---------------GIPAAKKHF 69 
jgi:Adeg_1414     8 ivVTRPVVIKVKLTPRYREMLLARLAHALELAERELKRVEAELGRLRIKG---------------------NAVTLAEAL 66 
WP_003542948      2 LTITRPVLVKVRVTDDYKKNLAAELQQTVSKVELELQHLEFQARKL-NELAKKNPT---------------GAEAALAQL 65  Desulfotomac...
WP_011878376      2 LTITRPVMVKVRVTDQYKRMLAVEFQQKVTKLELELKQLEFQTGKL-MEIAKKNPS---------------AAEAALTQV 65  Desulfotomac...
BAF59902          4 LTLFRPVLVKVKVTEAYKREVAAELQEALRRVELELQHLDFQEKRLAAELEKKNPQ---------------GIAAARQHL 68 
WP_012630313     88 NARKSEILEQKNQILQQLNQVQLLQLEQEVDQGQIDNFFFIKEGDNLIQKMQVELLIRDGVIEQIR 153 Cyanothece sp. PCC 7425
WP_014015999     69 EEQKQRLAAAKAKAQHDREEAEQLTIGSEIRQGTLEQTVVVKVGDDLEKLMGTEILLEDGKIVSIR 134 Megasphaera elsdenii
CDA48302         69 EAQKAQMQQVKEKLTNDKEHLEKLAIGAELNRAPINRLVTIHVGDDMNNIVGGEILVEDGKIIAfr 134
WP_022382030     69 EAQKVQMQQMKDKFLADKDHLERLTIGAELNRAPMNRLVTIHIGDDMNELLGGEILVEDGKIVEFR 134 Dialister massiliensis
WP_007070769     69 DAQKAQMIQVKDKLTADKEHLEKLTIGAELPRQPLNRLVTLHIGDDMNAVAGGEILVEDGKIIAfr 134 Dialister invisus
jgi:TherJR_2048  70 QDEREKRTKAREQLTEQIKQIGKLAIGSEIIQGTLDTLAEIKVGDNWQDIFNVEVVVCDDRIIEIR 135
jgi:Adeg_1414    67 ENLRREKAAARDRLRQQYESVKNLPLGTELVQGRTESLVEVGVGDEASRLGPVEIVIEEGKIVAVR 132
WP_003542948     66 EQEKQRRLDTRAKLLDKIKEVGRLVNGSEVVQGKVESIVEVKVGDDWRQLMGVEIILEDGKVAEIR 131 Desulfotomaculum nigrificans
WP_011878376     66 EQEKQKRLDTRLMLLDKIKDVGKLVNGSEVLQGKVESFVQVQVGDDWNQLMNAEIILEDGKVVEIR 131 Desulfotomaculum reducens
BAF59902         69 EQERQHRHERRRKLIERLKEVGQLALGSEVILARMEGPVELRVGDDWRKVLGVEVVLEDGIITAIR 134
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