Conserved Protein Domain Family
VirB6

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COG3704: VirB6 
Type IV secretory pathway, VirB6 component [Intracellular trafficking, secretion, and vesicular transport]
Statistics
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PSSM-Id: 442918
Aligned: 110 rows
Threshold Bit Score: 83.997
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012461383  649 AIGCLKEALDkmfyadSITHDQVSSASIlkPLSSfqrGMTLTVKAALMLYIIFFGIKMIFVKRFFSLERLVTGVLQILIV 728 
WP_011799407    6 PITWLVGEIN------KIVSSGAGSAAS--AIAT---AVTPLAAVGFGIYIILICINYMRGAETEPVIDFGVRCAGFAVI 74  
WP_011950748    5 LFADIYTNID------GKLDLFLNERLN--NVID---VVRGPLALGLVIYIALFGYMVMRGIVSEPWGELVYRMVKLCLL 73  
WP_012520255    4 VFDPAYDYVD------GQLDQFLNQRLS--DVIA---EVDGPLRAALLLYVVLYGLAVLRGMINEPIMEGVGRMIKLAFV 72  
WP_011993184    4 VFSFLDNQFK------TPLEDFISSGTS--GISS---WVTGPLTIALTLYVILYGFLVLRGSIPEPIMEFAFRAMKLAII 72  
WP_011179728    8 PFESISGYIL------NPLENAMNTTVS--GLSS---AISAPLNLASIIFIFLYGYNVMTGRVSLSMHSLLNNVVKIVVV 76  
WP_013039067    5 MFNSLYANVD------GKLDLFLNERLQ--NVVE---VVRGPLAVGLVIYIALFGYMVMRGIISEPWGELFYRMVKLCLL 73  
WP_013634981   10 VFEFMYNQYS------TGFLQSLNSDVG--TALS---AALPPLSAALIIWVIILGYLMMTGSLD--IRYGISKVSTMAIV 76  
WP_089423113    1 MWQGLYDDFI------SNLTSQTDAIAG--NMSS---ALTPPLTAAMMLYIILYGIAIIRGSIQEPVLDFAVRGIKLAII 69  
WP_013039067    5 MFNSLYANVD------GKLDLFLNERLQ--NVVE---VVRGPLAVGLVIYIALFGYMVMRGIISEPWGELFYRMVKLCLL 73  
WP_012461383  729 MYFSVGlgpmtnkdgkisyNNGMQDHFLPFLSS-VTSELAHMVFSSVGsdsavggtklcyfdpnkdytpdaryyALWDAI 807 
WP_011799407   75 IGLGLN-------------AANYTSTVIPIVTG-VGSDLASAVSGGS---------------------------ASAGTL 113 
WP_011950748   74 YVAATT-------------VA-YSEWITNPLFHgMPDAISQALAGKTi-------------------------tSVGSVF 114 
WP_012520255   73 YTVATT-------------VA-YSDWVTEPLFHdLPNSLARAISGGNv-------------------------qTIGQAF 113 
WP_011993184   73 LMLVQN-------------ASNYQTYVSKVFFEdLPTEISGALNTGSa--------------------------PSASAF 113 
WP_011179728   77 TAMATN-------------ADTFNTYVKDIFFGdLANAIGNALNSNP---------------------------ASANVF 116 
WP_013039067   74 YVAATT-------------VA-YSDWITTPLFHgMPDAISQALAGKTi-------------------------dTVGEAF 114 
WP_013634981   77 VGIIAS-------------TSLYDSYVQTLFMKsLPSFVASTFSSGNt-------------------------sNIPQSL 118 
WP_089423113   70 WSLVSS-------------AGEYTSWVGSTINN-GISEFINALTGGSGtm----------------------------pG 107 
WP_013039067   74 YVAATT-------------VA-YSDWITTPLFHgMPDAISQALAGKTi-------------------------dTVGEAF 114 
WP_012461383  808 DCRIgyylgfrllhnytvdrskpslggklvgSSIGTsANDDItkhLSNIkdghALkkddtflvfptlwglllsgeiiffl 887 
WP_011799407  114 DQLA---------------------------LHYLK-ILDDG---YESAss-sGFpwnagsml-------------lyfm 148 
WP_011950748  115 DDYF---------------------------GQVDS-LVLIIr---TEAa---TYldinpwkl-------------vllt 147 
WP_012520255  114 DDFL---------------------------GRGFE-LAESC---SQSAn---MMdpvpw-------------------i 140 
WP_011993184  114 DSLL---------------------------DKGQK-SANDI---WAKGswpvdil---------------------tga 141 
WP_011179728  117 DYIL---------------------------LKTSA-RYQEV---LAAAwflekim---------------------vgl 144 
WP_013039067  115 DDYY---------------------------TQSDA-IVARIe---TEAa---TYsdinpykl-------------vlya 147 
WP_013634981  119 DHTF---------------------------NLFWI-AGQII---YHKAncatcvlep-----------------yvlgi 150 
WP_089423113  108 DSVM---------------------------VQAHE-FADKVq---EQYaseswtgvi------------------vggi 138 
WP_013039067  115 DDYY---------------------------TQSDA-IVARIe---TEAa---TYsdinpykl-------------vlya 147 
WP_012461383  888 vmllFVIIFLTLFWRFMAVFITSLVNLYVMCYISPIFIPMVLFEKTKSMFNNWLHLTLSFALQPAIVAAFIALFVTLMds 967 
WP_011799407  149 kytcILVGLIPFLVAATIAIIIADVGSVLVAMIGPLFFAFLIFPATRQYFSAWLNTALSYALIPVFVAVIATISVGLSkt 228 
WP_011950748  148 lavaIYGLAGLSAAIGFAITVFAKVALAVVIALGPIFIALSLFETTRRFFYGWLGQVFNYIVLMAVIIAITALITDLGat 227 
WP_012520255  141 vallIYGVTALAAGLGFGITMLAKVALALLVAVGPIFIACIPFEATRKYFWGWVSQGVNYLLVFALIIAVFQLVLALVqn 220 
WP_011993184  142 aglvVIVMTFIVAAIGYVVSLYARVALAIVLAIGPIFVALAMFQSTRRFTEAWIGQMANFVILQVLVVAVGSLLVTCLda 221 
WP_011179728  145 lgslMIMAVIVFCIGGFIVQMFAQVALVMIIGLGPLFISLYLFNATRKFTDAWITTLINFTILQVLVIMLGTIMCKIIlh 224 
WP_013039067  148 lslgLKALVGLSAAVGFAITIFAKVALAIIIALGPIFIALALFEPTRRFFHGWLGQVFNYIVLLAVIIAITTLITDLGaa 227 
WP_013634981  151 eielVLVVFFIALALVFAVYLISTTLTGLLVAIGPFLLIGYLFEATKGIPERWLGKLIGLAILLLLITALLSLFTGGMtd 230 
WP_089423113  139 iaivVLVTAFIFAAIAFVVSLLTTFALSIMAGIGPLFICFALFDATRGWFFAWLGQILNFALVKLLVIVLTVLIVSLL-- 216 
WP_013039067  148 lslgLKALVGLSAAVGFAITIFAKVALAIIIALGPIFIALALFEPTRRFFHGWLGQVFNYIVLLAVIIAITTLITDLGaa 227 
WP_012461383  968 ityktcqfarydyqqgnkilSTFELRVPDRYIQDHGLFDDAYNSDAAKICRESAGYRLVEYFNGKNWHQRIFLFFKAFVV 1047
WP_011799407  229 mlsgsgslddvslkavflasmgnltllfllkqvsalasslsagginasmpgsigtlvsaikgsakdikamqagyratkad 308 
WP_011950748  228 alt-------------aaegTPDVTIGAVLFAVYIFLGTIFFFQAPSIATGIAGGAAAGVGAFAGSAWGTMAAPFQQRRS 294 
WP_012520255  221 -------------------qWGMITAQPDPKVAGLVFSVYGVLAAIFFLQVPNIATGIAGGAAAGLRDFGRSGVWATRAA 281 
WP_011993184  222 tfatmesyadvlmrpialgaialsalyvfyqlpgiasalaaggasltygygaardahegtiarstryaaravgrgvraag 301 
WP_011179728  225 vlngtydsiyflfppvvvisivgailfralpgiasalssggpyfnagissggqiftmlssgaktgrnaaksaastlsgta 304 
WP_013039067  228 ataas--------egvvdtaFGAVLFAAYIFLGTIFFFQAPAIATGIAGGAAAGVGAFAGTAWGTMASPFRQRRVMRNSR 299 
WP_013634981  231 flntkvsttftadpvqteiiilgeiaaytaitafitimlpgiaayigggvdfnisgivnpanwfk--------------- 295 
WP_089423113  217 --------------------GNIYTQTSVLDIGVAWGAYVSGLLCSIIFFFLIPSIASGLSAGAQASTGMLQRSVERNLG 276 
WP_013039067  228 ataas--------egvvdtaFGAVLFAAYIFLGTIFFFQAPAIATGIAGGAAAGVGAFAGTAWGTMASPFRQRRVMRNSR 299 
WP_012461383 1048 YPEPDFLP 1055
WP_011799407  309 gqavgrwa 316 
WP_011950748  295 ARNSRNLE 302 
WP_012520255  282 SKINAPSL 289 
WP_011993184  302 rnfgsgga 309 
WP_011179728  305 gaaakvak 312 
WP_013039067  300 NLERAARR 307 
WP_013634981      --------     
WP_089423113  277 IPTRGGTG 284 
WP_013039067  300 NLERAARR 307 
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