Conserved Protein Domain Family
TerD

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pfam02342: TerD 
TerD domain
The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.
Statistics
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PSSM-Id: 426730
Aligned: 211 rows
Threshold Bit Score: 153.425
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:PCC7418_3410   1 MGIQLTTGQRFSLKK-QAPGLNALLCGLGWELAPRkglkklFKPDFDLDISVLCLNEEGKLQknTDvVYYGNLTHPSGAI 79 
jgi:Thivi_1844     1 MGTELQQGANAPIAD------KSVMIGVGWD----------ADIPWDIDVSAFLMGASGKVRsdQDfVFYNQTETPCGSL 64 
jgi:Thimo_3694     2 tSVALQPGANTSLSA-APSRPTRVIIAVGWTPSSP--------AGLEIDASAFLLGPNGKVRgdDDlVFYNNPRTADGSV 72 
Q2RW02             2 tvVTLTPGANTTIAD-C----AQIMVAVGWDPKSP--------PGMEIDASAFIIKADGKVVndEHfVFYGAQASPDGSV 68  Rhodospiril...
Q891Y5            79 asMKILKGQKISLNQ-KSPNISKLMVALEWEIKNT------SNKKLELDTSIFMVDKN-NTTqeEDfIFYSNLKSAQGGI 150 Clostridium...
tigr:NT01CX0671   85 ssIKLKRGQKIALNK-GSNKLSKLVVSLEWDINYS------GSHEFDLDTSIFMLDIN-KNTaeDKfIFYGNPKSIENSV 156
jgi:Dtox_2988    250 sipvLKKGQRIELSQ-FNPGDKKIFVGIGWDNRLA--------APIEIDAVAFILGGNKKIIrdEDlIFYGNRSSSDGSI 320
CDE50611         114 MLMPVARGQKTALRL-QERGCTRIRFGFGWHTNDS---------RCDVDASAFLLGESGRVLsdEGfVFYGQQTSSDGSV 183
CDA24375          71 linpVQKGQKIAIENqGK--LSKVYAKLGWNVTNS---------NCDVDVSAFMLNNSGCVIgdSWfVFYGQETSPDNST 139
CDE55011          66 llnpVAKGQKIPLSS-FS--AEGLDVRLGWNVKNS---------VCDIDVSAFLLSSQGKVPgdDWfVFYGQPQSPDHSV 133
jgi:PCC7418_3410  80 SHLGDNLTGEhttpnatekheEEEDDeeitdkEQILVTLPQVPKRVKKLVIVANIYEps--arRQNLGQVENAYVRLVDL 157
jgi:Thivi_1844    65 CLESDHE----------------SDQ------RAFRALLARVPEDVSKIVFTITIGAnsgaddCPHCGMIEQLYIRVTNL 122
jgi:Thimo_3694    73 ATTPAPT----------------GDQ------QAFLVEFAKIAGAIEKIAFCVTIHEge--arRQSFGTLQSAWIRALDA 128
Q2RW02            69 RFVASPMAGNp------------GDV------QAFGIDLAKLAGTIDAIDICVTIHEgq--arRQSFASLKGVFARILDL 128 Rhodospiril...
Q891Y5           151 VLKSDHNSNL-----------KDGYD------EVVQLDLTKIPLNIEKLAFTVTIYEae--drGETFENISNAYFRLIDT 211 Clostridium...
tigr:NT01CX0671  157 VLGEDFNLKL-----------KDYYD------ERIMIDLDLVPDNIEKLAITVTIYDge--krGQNFSSISNGIIRIIDS 217
jgi:Dtox_2988    321 -----SLLGQ-----------GKGLQ------EKISIDLSRLPQQYERIVIALAIYEgk--kkQQYFNQLERVYIKVS-D 375
CDE50611         184 RFQPNGA----------------DDR------ETITVDTARIDPRIRKIVFVLTIDEal--tqKLHFGMLQNVYLRILDD 239
CDA24375         140 HFSIDNG----------------QDR------EVITIDFNKLNSNVSKIVFVLTINEal--ekHLNFSMLNDAYIRIMND 195
CDE55011         134 LFSQINDP---------------WDR------EKIAVHFSRLNPAVEKIVFVLTIHEal--qnHLNFSMVKDACIRIMDS 190
jgi:PCC7418_3410 158 EHEVEIARYNLSsDHYCSiETGIILAEIYRqpdNEGQWQVEVVAKGINVGsLQEL 212
jgi:Thivi_1844   123 SG-EDLIRFNVT---NVGqERALMLGDLYR---HQGSWKFRAVGQGYNGG-LDAL 169
jgi:Thimo_3694   129 NDGAEIARFDLP-LAGRQ-EVAMIFCEVYR---RNQEWKLRAVGQGFNQG-LAPL 177
Q2RW02           129 ATNREIARFDLQ-TAGMA-ETAITLGKVYR---RNDQWKVRAVGQGFAGG-LAPL 177 Rhodospirillum rubrum ATCC 11170
Q891Y5           212 YTKKEILNYKFD-DQLSE-ETAIVVAEIYR---YKGEWKINCIGSGFKGG-LKAL 260 Clostridium tetani
tigr:NT01CX0671  218 LGKDELFSYEFN-EGLKL-ETAVVVAEIYR---HNGQWKLNPVGNGFNGG-LEAL 266
jgi:Dtox_2988    376 ESGKPMFYFEV--KDFALmENSLIIAEIYR---YKGKWKLAAVGAGYRDD-LKAL 424
CDE50611         240 RDGREILSYPLG-NAFEN-VTSMTLGELYL---HQGQWKFNPVGNGVHMD-LAGQ 288
CDA24375         196 SN-QELVSFKMD-EYYSN-VTSMMIGEIYQ---HNGAWKFAAIGNGVAKD-LAGL 243
CDE55011         191 SSGQELVSYRMD-QYYSN-VISMMIGELYK---YKGSWKFHAIGDGVAKD-LKGL 239
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