3D6W,4CBV


Conserved Protein Domain Family
LytTR

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pfam04397: LytTR 
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LytTr DNA-binding domain
This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern.
Statistics
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PSSM-Id: 427920
Aligned: 92 rows
Threshold Bit Score: 48.3564
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3D6W_A  11 DGWIPVPFSKVXYLEAKDKKTYVNAE---ELTGTHKYSLQEFEYLlpkDSFIRCHRSFIVNVNHIKAIYPDTHSTFLLSX 87 
Q92UV1 150 GQTLVLPTDGIAMLAAEADFTRIVMAd--ARDHLVCRLLGQFDAElptPPFIRVSRSLIINLDRVVRVRSQDKGRSLLSL 227 Sinorhizobium meliloti
Q9KX27 296 HGSKVINTADIFSVHANAHYTYVFNG---REDIFCPLSIGEIIERlppDTFFRVHRSYIINIHCVARLKRAGD-NGIAEL 371 Oligotropha carboxido...
Q9AAP5 413 RGVELVPLAEILSVVGADDYVELRLVg--GRSLLHAARLDALTTQl-pVSFLRVHRSVIANLTHAQRLERDGD-RWRLHL 488 Caulobacter vibrioides
Q9A7V9 213 ARLIRVAVDKIIAVRSAGNYVEFILAd--ERRPLMRSSLTAMQNAlapQGFVRTHKSWLVNKALVTGLRPEGSGDYTIEL 290 Caulobacter vibrioides
Q89M57 232 ASRIRVAPRDILWVASAGNYIEYSLAd--GTQRLIRGTLAATENDlarFAIVRVHRTRLANLDRVRGVEFKPSGDFELTF 309 Bradyrhizobium japonicum
Q9ABD4 174 ARRVPVDITAVEWFGAADNYVVVHWD---GREGLMRATLQSLEARldpRLFARAHRSALVNLSKVSQAQPLSDGSWRLTL 250 Caulobacter vibrioides
Q7CLS5 196 gRDFLVAAADIEWLQASGNYVNLHVR---GHDYPLRSTMTAIEAKldpAVFVRIHRSYIVNLGCVVSIEPLDAGEARVHL 272 Xanthomonas campestri...
Q8A0A3 172 SKIHLIKTDELIYIQACGDYVMLITP---SGEYLKEQTMKYFETHlpsDTFVRVHRSTIVNVTQISRVELFGKETYQLLL 248 Bacteroides thetaiota...
Q9CE27 141 SG-YPISIDSLLYIEADKTHRNYLRAitkDNECLVRGTISDVKKKi--PNLLALGRGLLVDTNKIRRIEED---GLTLCF 214 Lactococcus lactis su...
3D6W_A  88 DN--GERVPVSQSYASYFRKLLG 108
Q92UV1 228 GRs-LTPIMLGRVATTRLRRALD 249 Sinorhizobium meliloti
Q9KX27 372 DSpvRRSVPVSRSRLPQLREQLA 394 Oligotropha carboxidovorans
Q9AAP5 489 NE--GPPLPVSRSRQPAVREALA 509 Caulobacter vibrioides
Q9A7V9 291 G---ALEAPLSRRFPKALAALRE 310 Caulobacter vibrioides
Q89M57 310 DT--GQTLGGSRRYRPAVASLGD 330 Bradyrhizobium japonicum
Q9ABD4 251 AS--GAEVVTSRTYRDALLKRLG 271 Caulobacter vibrioides
Q7CLS5 273 SG--NGPLPCSRRYLASLRRAag 293 Xanthomonas campestris pv. campestris
Q8A0A3 249 KN--GVKLRVSLSGYRLLKERLG 269 Bacteroides thetaiotaomicron
Q9CE27 215 KQs-LKKVKAPAVCKKELKELKK 236 Lactococcus lactis subsp. lactis
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