3LU0


Conserved Protein Domain Family
rpoZ
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TIGR00690: rpoZ 
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DNA-directed RNA polymerase, omega subunit
This small component of highly purified E. coli RNA polymerase is not required for transcription, but acts in assembly and is present in stochiometric amounts. The trusted cutoff excludes archaeal homologs but captures some organellar sequences. [Transcription, DNA-dependent RNA polymerase]
Links
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Statistics
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PSSM-Id: 188073
Aligned: 7 rows
Threshold Bit Score: 74.8122
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3LU0_E   1 MARVTVQDAVEKIGNRFDLVLVAARRARQMQ----------VG-GKDPLVPE--ENDKTTVIALREIEEGLIN 60  Salmonella enterica subsp. e...
P43740   1 MARVTVQDAVEKIGNRFDLILTAARRARQLQ----------LN-QSAPLVPE--DNDKPTVIALREIEKGLIN 60  Haemophilus influenzae Rd KW20
P08374   1 MARVTVQDAVEKIGNRFDLVLVAARRARQMQ----------VG-GKDPLVPE--ENDKTTVIALREIEEGLIN 60  Escherichia coli
Q9ZCX4   1 MARITAEDCNKIIPDRFRLVVLATRYAKLLN----------YKvETNQIKKE--KRDKPPVISLRRIAAGKVS 61  Rickettsia prowazekii str. M...
O66570   2 SRRPKIEEAMKRVESRYELVHAAVRRTLQLL----------RE-GEDFFVQEggEVHKKTFAAIEDIAEGKVK 63  Aquifex aeolicus VF5
O35011   1 MLDPSIDSLMNKLDSKYTLVTVSARRAREMQ----------IK-KDQMIEHT--ISHKYVGKALEEIDAGLLS 60  Bacillus subtilis subsp. sub...
P71660  35 ITNPPIDELLDRVSSKYALVIYAAKRARQINdyynqlgegiLEyVGPLVEPG--LQEKPLSIALREIHADLLE 105 Mycobacterium tuberculosis
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