7CZB


Conserved Protein Domain Family
DER1

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pfam04511: DER1 
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Der1-like family
The endoplasmic reticulum (ER) of the yeast Saccharomyces cerevisiae contains of proteolytic system able to selectively degrade misfolded lumenal secretory proteins. For examination of the components involved in this degradation process, mutants were isolated. They could be divided into four complementation groups. The mutations led to stabilization of two different substrates for this process. The mutant classes were called 'der' for 'degradation in the ER'. DER1 was cloned by complementation of the der1-2 mutation. The DER1 gene codes for a novel, hydrophobic protein, that is localized to the ER. Deletion of DER1 abolished degradation of the substrate proteins. The function of the Der1 protein seems to be specifically required for the degradation process associated with the ER. Interestingly this family seems distantly related to the Rhomboid family of membrane peptidases. Suggesting that this family may also mediate degradation of misfolded proteins (Bateman A pers. obs.).
Statistics
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PSSM-Id: 427988
Aligned: 9 rows
Threshold Bit Score: 204.505
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7CZB_A  11 IPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATFYf---PvgpGTGFLYLVNLYFLYQYSTRLE 87 
Q9Y7Y0  16 IPPVTRYILLGTAATTILTLCQLLSPSMLVLHYPLVVRQKQWYRLFTNYLY----A---GTGFDFIMNIYFFYQYSTYLE 88  Schizosaccharomyces p...
Q9VQ57  10 LPRFTRYWLTATVVLSMLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVfpisS---NTAFHFLINCFFIVQYSSKLE 86  fruit fly
Q93561  10 IPIVTRYWFLASTIIPLLGRFGFINVQWMFLQWDLVVNKFQFWRPLTALIYypvtP---QTGFHWLMMCYFLYNYSKALE 86  Caenorhabditis elegans
Q21997  11 MPPVTRFYTGACVLLTTAVHLEFVTPFHLYFNWELIIRKYQFWRLITSFCFf---G---SFGFSFLFNMIFTYRYCMMLE 84  Caenorhabditis elegans
Q9D8K3  13 VPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITTFLFf---G---PLGFGFFFNMLFVFRYCRMLE 86  house mouse
Q9VEU2  11 IPVVTRAYTTVCVLTTLAVHLDLVSPLQLYFNPTLIVRKFQIWRLATTFLYf---G---TIGISFFFNMVFTYRYCRMLE 84  fruit fly
Q12743  30 IPPITRTLFTLAIVMTIVGRLNLINPWYFIYVWNLTFKKVQIWRLLTSCVMl---S---SRAMPALMELYSIYDRSSQLE 103 Saccharomyces cerevis...
Q99J56  11 IPAITRYWFAATVAVPLIGKLGIISPAYFFLWPEAFLYRFQIWRPFTATFYfpvgP---GTGFLYLVNLYFLYQYSTRLE 87  house mouse
7CZB_A  88 TGAFDGR---------PADYLFMLLFNWICIVITGLam----dmQLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACY 154
Q9Y7Y0  89 NFVFARN---------AKKYIIYLVKVALLIDAFSLisg---lgSALNQSLAAAIAYNWSLFNSFSKIQFLFGFHVQGKY 156 Schizosaccharomyces p...
Q9VQ57  87 KDQYSRS---------PADYLYLLIVSAVLANIGGMif----nvYFLMDTLVLAITYIWCQLNKDVTVSFWFGTRFKAMY 153 fruit fly
Q93561  87 SETYRGR---------SADYLFMLIFNWFFCSGLCMal----diYFLLEPMVISVLYVWCQVNKDTIVSFWFGMRFPARY 153 Caenorhabditis elegans
Q21997  85 EGSFRGR---------RADFVYMFLFGAVLMILSGIfv----qiLFLGQAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPY 151 Caenorhabditis elegans
Q9D8K3  87 EGSFRGR---------KADFVFMFLFGGVLMTLLGFlg----slFFLGQALMAMLVYVWSRRSPHVRVNFFGLLNFQAPF 153 house mouse
Q9VEU2  85 DGSFRGR---------SSDFVMMFIFGGVLMTFFGIfv----nlLFLGQAFTLMLVYVWSRRNPLVPMNFFGVLNFQAPY 151 fruit fly
Q12743 104 RGHFGPGlsnrrgpmvTVDYAYYLCFCILAITTATTiiygsyypVVLTSGFISCITYTWSIDNANVQIMFYGLIPVWGKY 183 Saccharomyces cerevis...
Q99J56  88 AGAFDGR---------PADYLFMLLFNWICIVITGLam----dmQLLMIPLIMSVLYVWAQLNRDLIVSFWFGTRFKACY 154 house mouse
7CZB_A 155 LPWVILGFNYIIGG-SVI-NELIGNLVGHLYFFLmfrypm--------------dlggrNFLSTPQ 204
Q9Y7Y0 157 LPYVLLGFSFLTGGlPSLvVLGFGIISAMIVNFF-------------------------DSIHTPV 197 Schizosaccharomyces pombe 972h-
Q9VQ57 154 LPWVLAAFEFIFHF-SL--ASLVGIFVGHVYYFFkfqysq--------------dlggtPLLETPQ 202 fruit fly
Q93561 154 LPWVLWGFNAVLRG-GGT-NELVGILVGHAYFFValkyp---------------deygvDLISTPE 202 Caenorhabditis elegans
Q21997 152 LPWVLLLFSLLLGN-NAV-VDFMGIACGHIYFFLedvfpf--------------qehgkRFLKTPQ 201 Caenorhabditis elegans
Q9D8K3 154 LPWALMGFSLLLGN-SVV-TDLLGILVGHIYYFLedvfpn--------------qpggkRLLLTPS 203 house mouse
Q9VEU2 152 LPWVLLCCSMILGN-TVW-VDVIGMGVGHIYYVLedvypt--------------lsngyRLIKTPY 201 fruit fly
Q12743 184 FPLIQLFISFVFNEgDFV-ISLIGFTTGYLYTCLdthtlgpiwgmisrkadptygispngkFSTPW 248 Saccharomyces cerevisiae S288C
Q99J56 155 LPWVILGFNYIIGG-SVI-NELIGNLVGHLYFFLmfrypm--------------dlggrNFLSTPQ 204 house mouse
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