5X15


Conserved Protein Domain Family
RraA

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COG0684: RraA 
RNA degradosome component RraA (regulator of RNase E activity) [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 440448
Aligned: 653 rows
Threshold Bit Score: 95.2366
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5X15_A        43 LNRVSSATACAKLHe-----lGiRRSYLsGP-TALDL-G-NKVTGPARTLQFMPQRE-DvasglaqeyverstALWAVL- 112
WP_011739522   7 VDGLGVADVVDAMmmt--yahR-AHIIE--LdSP-DP-D-RVLVGPAVTISFLPVRKdLmdpek----hslgpAIYRAVa 74 
YP_888710      8 AGRVRTADIVDAMGrlh--rhR-CHLLD--LvSP-TP-G-RRLFGPAVTISYFPACSaAlppdc----hnfrrLFYQAI- 74 
WP_013628180  10 LQKYDSPTVCNAIElwdmrprT-AGYMNeTI-QACFP-DlPPMVGIATTATFRSAAApMqgday-----sslsKQAEIL- 80 
WP_075094371  11 LAKFDTPTICNAIElffvrprN-TGFMNdTI-KACFP-KfPPMVGFAFTTTFRSMASpPkgday-----tglaDQVAGY- 81 
WP_110173276  12 LAAIDSPTVANAIErfkvrrrV-DGYADrDL-RCAFP-DyGSMLGYAVTCTADSTTEgRpdga-------glvGLWAAL- 80 
WP_077024039  18 LAEYDTALLANLMRfvdttptH-LWYMSnEI-RALLPdV-GPTVGVAVTCELDTSTPdDesdgn----addfwTQLSQM- 89 
WP_104913745  15 LKSVDSPTIANAIEtlnvrdrT-VGFLAgDI-QCQFP-QlGSMVGIALTVEMSDRPGpVegkt-------giwEMWETL- 83 
WP_120762468  25 LRGVDSPTIANALErlqlrdrS-DGYLGgSI-GCAFP-ElGTMVGVALTVTVDNAVGrParqe-------gywQLWEAL- 93 
WP_129888575  13 LRRIDSPTISNAIEtfnvrprV-AGYVGyDI-RCMFP-DlPPTLGYAVTCTVDSTTEgRegi--------gfnKLYELL- 80 
5X15_A       113 EEVQ-PGDVLVV-QAy-GS-AFTGCLGDMLVRYFKRKGGAGIVVDGRIRDAPRVREL-GVPIWCTGTTPHYASQsElFPW 187
WP_011739522  75 RHDP-AGAVLVM-ASn-GY-HQTSLGGGTKLSRVENLGMAGILADGMLRDFEELSTY-NFATYCHGETARGGGN-EiQPY 148
YP_888710     75 ERGG-EGCVLVL-ASn-GF-TEVSLGGGTKLSRAENHRLAGVLADGRLRDFAELEQY-DLAVYCRGETTRWGGD-TvTPF 148
WP_013628180  81 EQTE-LPAVVVFqDLd-EP-TAAATFGEVMCTTYKAFGAAGLITTGTGRDLEQVAAL-DFPAFTSGAQAAHG---YcHMV 153
WP_075094371  82 DKIP-GPPVMVFqDLd-QP-CVSATFGEVMCTIYKSFGAQGIITSGTGRDLDQVEAL-KFPAFTSGTICAHG---YcHML 154
WP_110173276  81 EAAP-TPAVLVIkDVg-PDpRKGCHMGEIMATTAKALGAVGCVSDAGLRDVKEVAALgGFQYFCPGFVVSHG---QpVIL 155
WP_077024039  90 EAMDvPTVWVVK-CVgsRP-QHECIMGDGMGKLLHAAGCVGAVTDGGLRDLPGLRTI-GFAAYGS--GVTIHHC-NlRFR 163
WP_104913745  84 EKLP-SPNILVIkDAs-GRpERVAYAGEIMSRLAMRLGAVGMVTDGALRDVSEAEDM-GFNYFMKYPVVSHS---NfHVT 157
WP_120762468  94 ERAE-GPVVIVMkDAs-GTpTRLAYAGEIMVTLASRLGAVGIVTDGALRDLPEVRAR-GFHYFMRYPVVSHA---NfELS 167
WP_129888575  81 KDAP-KPAIVVMqDVg-PDrVRSCHAGEVMATTMKHLGAVGILTDGGLRDAREVHAMgGFQFFCAGLVVSHG---NpICV 155
5X15_A       188 AYDVPVAAGGVLTLPGDLVVADDDGAVVVPVSKAQEIVDSAFDHEQWEEFSRMRIDQGA-RLSDYY 252
WP_011739522 149 LADVPVAIGGVTVVPGDVIFAKGSTAVVIPGDQAEAILTKAHNIMKKMDQVKESLKSEDp---ETV 211
YP_888710    149 EANHPVVIGGVAVFPGDYIFADTSGAAVIPADDVRAVLHTATQVVASDAAVIAGIKNEQl---DSS 211
WP_013628180 154 DLQIPVSVGGVMVRPLELLHGDANGVTTIPESIASEVPDVCDEIIRAEQIVLDYLKGDGiTAKGFD 219
WP_075094371 155 QTNIPVTVGGIWIEPGALLHGDLNGVTTVPIEIASEIPDACREIMKAEQYVLDYCKSGSpNAKGLA 220
WP_110173276 156 DVNVPVEIHGLPIAPGDLLHGDVNGLLVVPDAVAADVAAACDEVRADERALLDLITAPGfSVEKLR 221
WP_077024039 164 RINTPVDIGGITISPSDVIHANAEGVIRIPEAAVTKLADRAPAYRAFEHDAHQLFRRTD-ITSAEK 228
WP_104913745 158 TVARPAHIGGEVISTGDILHGDRNGIVVIPWEVLDDLPSAVEKIRTQETADMDLIASDEfTLDRYK 223
WP_120762468 168 KVGDPVFLDGQLVRTGDILHGDANGVVTVPWESLPELRDAVAAIQASERRDLDYIDGPDfTLDGYK 233
WP_129888575 156 SVGDEVTISGMRVRCGDLLHGDINGVVHIPDECADKVAEAAYRIWAREEETMRQIAGSQiSFSGse 221
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