Conserved Protein Domain Family
cupin_TcmJ-like

?
cd06991: cupin_TcmJ-like 
TcmJ monooxygenase and related proteins, cupin domain
This family includes TcmJ, a subunit of the tetracenomycin (TCM) polyketide synthase (PKS) type II complex in Streptomyces glaucescens. TcmJ is a quinone-forming monooxygenase involved in the modification of aromatic polyketides synthesized by polyketide synthases of types II and III. Orthologs of TcmJ include the Streptomyces BenD (benastatin biosynthetic pathway), the Streptomyces olivaceus ElmJ (polyketide antibiotic elloramycin biosynthetic pathway), the Actinomadura hibisca PdmL (pradimicin biosynthetic pathway), the Streptomyces cyaneus CurC (curamycin biosynthetic pathway), the Streptomyces rishiriensis Lct30 (lactonamycin biosynthetic pathway), and the Streptomyces WhiE II (spore pigment polyketide biosynthetic pathway). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.
Statistics
?
PSSM-Id: 380396
Aligned: 19 rows
Threshold Bit Score: 157.07
Created: 18-Nov-2008
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
metal binding
Feature 1: metal binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H H E HClick to see conserved feature residue pattern help
Evidence:
  • Comment:The four-coordinate metallocenter usually includes three histidines and one glutamate.
  • Citation:PMID 8612079

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                          # #    #                                 #    
AAA67514      29 QGGSTRALLTPsSVGATSGFLGHIELAPgESVTEHYHPFSDKYLYLIEGsLVVRVNGEEVRLErDEALFVTrGQRHRIEN 108 Streptomyces gl...
P16558        29 QGGSTRALLTPsSVGATSGFLGHIELAPgESVTEHYHPFSDKYLYLIEGsLVVRVNGEEVRLErDEALFVTrGQRHRIEN 108 Streptomyces gl...
ABX71113      18 LGGTIRPLLTPkSVGASSGFLGTMTLEPgEFIAEHYHPYSEEFMFVAQGeIVVRIDGEEIVARaNEAMLVPkFGSHRYEN 97  Streptomyces ri...
WP_106243238  19 RGGEIRILLSPkSGGSSTGLMGVVTLAPgEFVSEHYHPYSEEHLYVMSGrPVLRIEGSPVPLApRQAILVPkGIRHRLEN 98  Nonomuraea sp. ...
POM23500      22 RGGELRIVLGPgTVGSRSGYMGTTVLQPgDRVVEHFHPYSEEFLFCIRGeQVLDIEGEEWTLSpGEAMYVPiGLRHRLRN 101 Actinomadura sp...
WP_051854745  20 QGAEVRILLTPgRAPGAEGFSGTMLLAPgECLSEHYHPYSDEFLYAVSGrIRVRVDGEPIGLEpGDALLIRrGQRHRMDN 99  Streptomyces sp...
WP_017537061  37 QGGRVRALLTPaSVGATSGFLGTVDLAPgESVSEHYHPYSDKFFYVLEGtVDFRLNGKTVRVEaSESLMVRrGTRHQLDH 116 Nocardiopsis ha...
ASA49563       1 MGGATRILLSPrTVGATDGFLGTLTLERgEYVAEQYHPYSDKFLYLVRGaVIVRVDGNPVHLEaDEAVMVRrGARHRIEN 80  Actinoallomurus...
SNS12012      20 LGGTIRMLLSPgTARTTAGLMALLELQPgERVSEHYHPYTDEHVYVSDGcLVLAVNGAEQVVNaREAVLIRrGARHRYEN 99  Actinomadura me...
WP_075334877  35 RGADLRIVLSPrSGGAQEGLLVIATIRPgESVTEHYHPYSEERVTVLGGaMELTVGEHRHEIGpDSSFVIPrGMRHRMTC 114 Pseudonocardia ...
Feature 1                                 
AAA67514     109 rGNVPARVVFQISPLAPRPELGHVD 133 Streptomyces glaucescens
P16558       109 rGNVPARVVFQISPLAPRPELGHVD 133 Streptomyces glaucescens
ABX71113      98 rGSETALIVFQMAPLAPSPEEGHVE 122 Streptomyces rishiriensis
WP_106243238  99 pSSDPVEVVFHLCPLAPAPELGHVD 123 Nonomuraea sp. NUAU-dht8
POM23500     102 vGDTEALNIYHLGPLAPDPSLSHID 126 Actinomadura sp. 5-2
WP_051854745 100 aGDEEAFLVFHICPLAPSPELGHVD 124 Streptomyces sp. NRRL B-1347
WP_017537061 117 aGGGQARLVFTIAPLAPRPELGHVD 141 Nocardiopsis halophila
ASA49563      81 aGASEAFLILSVSPLAPSPEMGHVD 105 Actinoallomurus sp.
SNS12012     100 rSDRPVTAVLFLGPLAPSPDMGHVE 124 Actinomadura mexicana
WP_075334877 115 lGDAPVRAVLTMSPLAPRPEWGHVD 139 Pseudonocardia sp. Ae717_Ps2

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap