Conserved Protein Domain Family
Phage_holin_5_2

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pfam16079: Phage_holin_5_2 
Phage holin family Hol44, in holin superfamily V
Phage_holin_V_2 is a family of small hydrophobic proteins with three transmembrane domains of the Hol44 family. These proteins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion. Full activity of the endolysin Lys44 from oenophage fOg44 requires sudden ion-nonspecific dissipation of the proton motive force, undertaken by the fOg44 holin during phage-infection.
Statistics
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PSSM-Id: 465009
Aligned: 47 rows
Threshold Bit Score: 44.4931
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDA61341      22 LVPCLYALGSIIKRSIRIDDTLIPGVLCVVGIFLSalvsvasceptnwiqwvILVAVSIGQGYVLAAAAICLNQLIKQH 100
WP_118207919  16 VAVVLYFIGMGLKQSQTVKDKYIPLILGGIGIVLCavwviascpistgqeiaMAVFTAIVQGILVAGLSTYVNQAIKQM 94  [Ruminococcus] g...
CDB85308      15 VAVVLYFIGIGLKKSETVADKYIPAILGVVGVVICgiyvvatcdlkgtqniaMAIFTAIVQGILVAGLSNYVNQVFKQL 93 
WP_022359091  14 VAVVLYFIGMWLKQSETVKDKYIPLINGLIGVAICaiyvfatcacgsgqdiaLAVFTALTQGVLVAGLSTYVNQIFKQs 92  Clostridium
WP_022202592  14 VALVLYFVGMWIKQSEAVKDRYIPLINGGLGIVICgiyvlatstcrsgqeifMAIFTAITQGILLAGLSTYVNQIIKQA 92  Lachnospiraceae
WP_008375153  15 VTAVLYFFGIALKQAEFIKDKYIPITLGATGIIICgiwvtstahfagaqdvlTAVFASVTQGIVVAGLSTYIYQIIKQA 93  Coprococcus comes
CDA13875      14 VAVVLYFLGMWLKQAAFIKDKYIPLVLGIVGIFVCgiyvvsvaafatvqdilSAIFAAITQGILVAGLSNYVNQIIKQI 92 
WP_106762972  15 LVPVLYIVGLGLKKTS-LSDKFIPLILGASGVILSaiwmfttcevfdqrcilTIIFASITQGILCAGASVYANQIYKQL 92  Pseudoruminococc...
CDE12103      12 LIPVLYLIGMGLKKANAISDRFIPIILGAVGIALTtcyel--------ttgqFNLFAAVTQGILCAGASTYANQIYKQL 82 
CDC64492      14 LIPVLYLIGVVLKKSR-VADHLIPATLGTVSVLLAlvwtfatseirclrdaaLALFTAVTQGVLIAGADVYISQLriqs 91 
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