Conserved Protein Domain Family
BRO1_UmRIM23-like

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cd09245: BRO1_UmRIM23-like 
Protein-interacting, Bro1-like domain of Ustilago maydis Rim23 (PalC), and related domains
This family contains the Bro1-like domain of Ustilago maydis Rim23 (also known as PalC), and related proteins. It belongs to the BRO1_Alix_like superfamily which includes the Bro1-like domains of mammalian Alix (apoptosis-linked gene-2 interacting protein X), His-Domain type N23 protein tyrosine phosphatase (HD-PTP, also known as PTPN23), RhoA-binding proteins Rhophilin-1 and -2, Brox, Bro1 and Rim20 (also known as PalA) from Saccharomyces cerevisiae, and related domains. Alix, HD-PTP, Brox, Bro1, Rim20, and Rim23 interact with the ESCRT (Endosomal Sorting Complexes Required for Transport) system. Rim20 and Rim23 participate in the response to the external pH via the Rim101 pathway. Through its Bro1-like domain, Rim23 allows the interaction between the endosomal and plasma membrane complexes. Bro1-like domains are boomerang-shape, and part of the domain is a tetratricopeptide repeat (TPR)-like structure. Intermediates in the Rim101 pathway may play roles in the pathogenesis of fungal corneal infection during Candida albicans keratitis. This family lacks the V-shaped (V) domain found in many members of the BRO1_Alix_like superfamily.
Statistics
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PSSM-Id: 185768
Aligned: 12 rows
Threshold Bit Score: 431.444
Created: 27-Aug-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative ESCRT-III binding site
Evidence:
  • Comment:based on mutagenesis of Saccharomyces cerevisiae Bro1
  • Comment:a surface patch that comprises at least part of the Snf7 binding site of Bro1
  • Comment:binds the Snf7/CHMP4 components of ESCRT-III; CHMP4 proteins are mammalian homologs of yeast Snf7

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
Q9P905         2 VYPFELPTTSHLSFQSALSS----HTHPSLPQSATTARHALRLALKAHNRLPRGfqrds--------------------- 56  Emericella nidu...
CBI58400       2 PYPFVLPTTSSFSFSFCFNC----ESHPSLPLNASTRRGVVREDLKAFKRTPREhqaak--------------------- 56  Sordaria macros...
XP_385784      2 PFPFVLPTTSSFSFSSSFSS----DTHPSLPLNASTYRGVVRDTLKKHKRLPPSsqisn--------------------- 56  Gibberella zeae...
XP_001938336   2 PFPFVLPTTSSISFIDYFNS----STHPSLPNCATTARGVLRDVLKRHKRIPPPsqasn--------------------- 56  Pyrenophora tri...
XP_001585070   2 PFPFELPTTSSFSFSTYFTS----DSHPSLPLAASTYRGVLRNALKRHKRLTPSqqssn--------------------- 56  Sclerotinia scl...
XP_002835796   2 PFPYTLPTTSTISYPTYFES----PLYPTLPLATSSHRGSLRNALKAHKRLPTAsqasn--------------------- 56  Tuber melanospo...
CAZ04931       1 MYMFELATTGSISFSDFLVT----TELVSQVSEATQLRARLRGVLKQNRAGQSGsvgkhvgsyneqrgtssgsqaagddd 76  Ustilago maydis
XP_003027172   3 TYLYELPTTGAISFADFCADhsaaKNYSSHITDATLQRASLRAALKESKRTEGDerd----------------------- 59  Schizophyllum c...
XP_002469340   3 TYLYELPTTGAVFFAGVCEDl--tVSYTTAIADATETRANLRAALKESKRADDGgkdy---------------------- 58  Postia placenta...
XP_775274      3 PYLYRLPTTSLITFSAILNDp--sSSYTTILSDATASRTKLHLALKGIADNEPGasa----------------------- 57  Cryptococcus ne...
XP_505518      4 SYTGQLPTTSPLSLTQLITS----DRYQQVIENADAARARVREQLKHAKKTGATeangd--------------------- 58  Yarrowia lipoly...
XP_001830711   1 MYTFELPTTGAISFSEFCIDqstnREYGFRFSQVTEARANLRAILKETKRTDGFdkdt---------------------- 58  Coprinopsis cin...
Feature 1                                                                                        
Q9P905        57 -----------hltsvLSAINDYLPYVVALAqglnngkpidtttpsttthleeirvaqrAELEPEWRATLasssl---rr 122 Emericella nidu...
CBI58400      57 ------------lptvVSSLTAYLPYLFAIDaglsqqavn----------geeiavilkTAPTIEWRPTLsdtaavavpg 114 Sordaria macros...
XP_385784     57 ------------lsrvVSSVNKYLPYLLLVDeglsnkg--------------taivnlkAPLVIEWRPTLsgevv---pg 107 Gibberella zeae...
XP_001938336  57 ------------lstvLSALNDYIPYLFALDaglsgtsca----------geevdlvlvKELEIEWRSTLgssip----g 110 Pyrenophora tri...
XP_001585070  57 ------------lssiLQALNNYIPYLLALDsgissqsqsg---------aehidiiltSTPTLEWRPTLsdhpi---pg 112 Sclerotinia scl...
XP_002835796  57 ------------ipfiIKLLESYLAHLLTLYdtltagd--------------afpregaPRLTTSWRTVLsarrv---ta 107 Tuber melanospo...
CAZ04931      77 crasatsvnaadwltiVKTIEEYLPHLLGVFncvqtd-----------------dlivrYEPVFSWRTSIsgtr-----f 134 Ustilago maydis
XP_003027172  60 --------------ylRQVIDDYLPQLLGIMscvahd-----------------eiglrEEPVFSWRTTLsanv-----f 103 Schizophyllum c...
XP_002469340  59 -------------lklVKVLDDYLPYLYAIMtcvhhg-----------------elmlkTEPIFSWRTTLsstl-----f 103 Postia placenta...
XP_775274     58 -------------lavLDAVQIYLPYLKGIIacldad-----------------ellfkGEPTFQWRAPLthfs------ 101 Cryptococcus ne...
XP_505518     59 ------------impvIKALEEYMPHITSIVdnegv-------------------frftSQIITCWRLPFqsqs------ 101 Yarrowia lipoly...
XP_001830711  59 -------------lklVKIIEEYLPQLQSVMtcvvhd-----------------eigfkSEPIFTWRSTLsanl-----l 103 Coprinopsis cin...
Feature 1                                 #  #                                   #  ##           
Q9P905       123 pstNRTRGtGVQYELAFILTTLGYILSSLARSGVtrtlyastt-----------psaeqrtaaVQTATKHLLQASTIHSF 191 Emericella nidu...
CBI58400     115 kepARVKVhSLEYEVFFALSCLAYAHTLQARIALhplyvlstap----------vgtqqrqvaVSAATKSLLDAASIYDY 184 Sordaria macros...
XP_385784    108 rerARIKIsSLEHEIAFVVSTLGFSHVLASRSALqplystssef----------pgaqertnaIQTATKSLLEAASVYDY 177 Gibberella zeae...
XP_001938336 111 repARVKLkGLESELCFTLSTLAYVYSLQARAQLhtlynatvp------------speqrataIGAAMKHFLEADSIHTY 178 Pyrenophora tri...
XP_001585070 113 reiPRIKIqSLEYEIYFVLSTLAYTHVLLSRSSLhplyssatas----------pssdqrtscIKAATEQLLSAGSIHNY 182 Sclerotinia scl...
XP_002835796 108 kepPRVARpGLSYEIFWSISTLGYAYTLLARSQLqgilappssntts----gsttdataaansFNQAAANLFTSASIFQH 183 Tuber melanospo...
CAZ04931     135 rgaQRIALgGLHYELASTLLTYALALSNLSAATVaslgwyerdrsl------sldqrkrnderLKWAADTLCRAAGILLY 208 Ustilago maydis
XP_003027172 104 hnsPRLNIpTLHGDLAFALLTYAFLLSNHARAVVaplgayehdrsi------sdaerrakdekLNFAVCLLCRASGLFAY 177 Schizophyllum c...
XP_002469340 104 hnsPRLSIpTIATELCFTQLTYGFALSNLARAVIhslgayerdrai------sdaerkakderLGFAVTLLCKAAGLFEY 177 Postia placenta...
XP_775274    102 fssPLLPLaSIHSEHLMVVLTYALALSNYAHSILaslpafeipagpkamphmssedekrttagLARAVDLLCQASGVAEW 181 Cryptococcus ne...
XP_505518    102 smaNKTPLhGLSFEYIMVLFTYALALATLANQYVardk----------------------edrWKHASAYISKARGVVDY 159 Yarrowia lipoly...
XP_001830711 104 ktsPRLPIpGLHADYAFTLLTYGYALCNLAWSIVnglgtyeqdrai------sdaarkvkdeqLNVAIKFLCKASGIFAY 177 Coprinopsis cin...
Feature 1                                                        #  ##                           
Q9P905       192 LSSSPYFatvse----------aatlpDLAPATQAALSSLALAEATLLTVLKDdsyvvaciqar----npndkdwmvrAP 257 Emericella nidu...
CBI58400     185 LALRAEGltsgyg--------mappcaDISPAALRAQCSLAMAEATLLAVLKDdpypavvaqdr----nkndtewmykAP 252 Sordaria macros...
XP_385784    178 LANRGEHatvs------------ppcpDVSQGTARALSSLALAEATLLAVLKDdpypaivaqdr----nkndkewmfkAP 241 Gibberella zeae...
XP_001938336 179 LANRAGQhnaq------------paavDISAPMLGALAELTMAEATLITVLKDdpypavviedr----nkqskdwmfrGV 242 Pyrenophora tri...
XP_001585070 183 LFARSTTltsp------------ppcpDISNPVFRALSSLTLAESNLLAVLKDdpypaavqqdr----nkndkewmikAP 246 Sclerotinia scl...
XP_002835796 184 LLTRPLPphas------------swppDLSPQVLSALSSISLSAATLSAVTKQdpyptylstiaiekkkqqkgkewlyNP 251 Tuber melanospo...
CAZ04931     209 LSTQLIPkwsdhvg------sldglppDLTTEATLALSNVCMAQAQALAIRKLvspsiak-----------avdtltpGP 271 Ustilago maydis
XP_003027172 178 ISERVLVdweasrdgg---aagftrppDLHKDVVTALAKMALADAQTLAIRKLltraan-------------dsavnpGP 241 Schizophyllum c...
XP_002469340 178 IGKDCIHewelerdravaagltcprppDLSREVVIALSKMALADAQTLAIRKLlskaaf-------------dntvtpGP 244 Postia placenta...
XP_775274    182 AAENVCLqveplkgvssgrlgkgkwpaESSRETFKALSMILLADAHLTAIRKLlfpvlty------------tlfappGP 249 Cryptococcus ne...
XP_505518    160 LRQCRSFqiicnep-------pasvprDLSSATMSALSHMLCGASHMLILYKCdaety----------------ldggAP 216 Yarrowia lipoly...
XP_001830711 178 IADTVLPnwevnrtev---ppgfnkppELTREVNNALSKMALADAQTLAIRKLlsksay-------------esniapGP 241 Coprinopsis cin...
Feature 1                    #  ##                                                               
Q9P905       258 EIPKVRa----HLFARLCIRAAEYAEQAATGLssvaaeg----------------------------------------- 292 Emericella nidu...
CBI58400     253 DIPKVRa----HLFARLCLAASEHAAQAYSLCaglgrag----------------------------------------- 287 Sordaria macros...
XP_385784    242 EIPKVRa----HLYARLCLAASEHAAKASSLCstagtg------------------------------------------ 275 Gibberella zeae...
XP_001938336 243 EIPKVRa----HLFARLCLASSEHAAKAQAMLgrsp-------------------------------------------- 274 Pyrenophora tri...
XP_001585070 247 EMPKVRa----HLFARLCLAAAEHAGNALAMLggmgngg----------------------------------------- 281 Sclerotinia scl...
XP_002835796 252 PAPPAGvr--aLLIARLCIAASDHAAKALGLLstaektd----------------------------------------- 288 Tuber melanospo...
CAZ04931     272 PLDKNHps--aSLLAKLHLNVVEQMESAVALLktiadkrrrksanhagtqiglsanhehelasrlsasrdradhehdddm 349 Ustilago maydis
XP_003027172 242 PLPRSHps--pSLLGKLHLECAELYGAARALAmtpgsas----------------------------------------- 278 Schizophyllum c...
XP_002469340 245 PLPKSHps--pILIAKLHLECVALYSSARSLAktpgdyrns--------------------------------------- 283 Postia placenta...
XP_775274    250 PLPPNHps--aPLQAKLYLYVHQLYSSARALLsvhqqptssapsnssrklfr---------------------------- 299 Cryptococcus ne...
XP_505518    217 SAGANSggfssSLLLRTAIFARDQFETASALLgepvskrklvtslvkeksskfslskklhlr------------------ 278 Yarrowia lipoly...
XP_001830711 242 PLPKSHps--pALLAKLHLECGSFYSSARSLVktigsskg---------------------------------------- 279 Coprinopsis cin...
Feature 1                                                                                        
Q9P905       293 -------------------------------------------------------------rkagvdeDVARYAHVLGLV 311 Emericella nidu...
CBI58400     288 -------------------------------------------------------------gggkvneNFLKYLDNLRRT 306 Sordaria macros...
XP_385784    276 --------------------------------------------------------------slkinsALLRYIEDLRRT 293 Gibberella zeae...
XP_001938336 275 ----------------------------------------------------------------kindDLLKYVDDLRRT 290 Pyrenophora tri...
XP_001585070 282 --------------------------------------------------------------kekvdaELLKYVEDLRRV 299 Sclerotinia scl...
XP_002835796 289 --------------------------------------------------------------ageigeELLRYAGSLQKV 306 Tuber melanospo...
CAZ04931     350 vetnrgagaqatskrnkllgrfklgssksspprsasvhsgphdvarssghlsastagapvdcdveissSLLKYLGFGAAF 429 Ustilago maydis
XP_003027172 279 -------------------------------------------------------------kdagvshALRAYLTTEAAI 297 Schizophyllum c...
XP_002469340 284 -----------------------------------------------------------deggeevspELRRYLSEEADF 304 Postia placenta...
XP_775274    300 -------------------------------------------------sntdkdviepeavegeiipELKRYLAKEAQL 330 Cryptococcus ne...
XP_505518    279 ---------------------------------------kddgspslapvssfesnrdlsstssgtldSLLSWLSRARGV 319 Yarrowia lipoly...
XP_001830711 280 ------------------------------------------------------------sgsvevisDLRKHLAEAASF 299 Coprinopsis cin...
Feature 1                                                                                        
Q9P905       312 ARARACRFFGVDADvag---kvGEGIAWLRAAKGALGLRNTgsasaeevttksrglsklklgfrERREERKlekgagger 388 Emericella nidu...
CBI58400     307 SRAKACRFFGIDSElgg---qtGTAIAWLNAGLQELGVERSpsdtggkksg---glgrlkekwtEKREDKKvergldw-- 378 Sordaria macros...
XP_385784    294 CRARACRFFGIDAElgg---qvADGIGWVRAGLSELGVEPKdhskksgls-----fsklkkdisEKREDRRvekeaaw-- 363 Gibberella zeae...
XP_001938336 291 AKGKACRFLACDAEasa---ktGEGIAWLRGAKKELGFASLgvesdkkasg----fsklkkdwqEKREDRKiekgvdw-- 361 Pyrenophora tri...
XP_001585070 300 GRGKACRFFGVDAElgg---ktGDGIGWLRAGLSELGIAVGddgkkssgig----fgrfkkewtEKREDRRvekgkdw-- 370 Sclerotinia scl...
XP_002835796 307 SRAKACRFLGIDAEaag---rvGEGISWIRGAKTILNASGSassv---------------gsfvGDRLRRKddvwga--- 365 Tuber melanospo...
CAZ04931     430 HRSMAYKWLAIDHGess--sriGTAIAYLSLSSALLSSSTMrdgapsha--------lipssllLNKSTKSgsag----- 494 Ustilago maydis
XP_003027172 298 HAALAHKWLGIDAGenggsekgGEAVGWLLWAKKELEAIRDaskgvks----------ialkkdEARGLRKdr------- 360 Schizophyllum c...
XP_002469340 305 HAALARKWLGVDAGesggtargGIAVGFLTWAKKDLEELKKqpgvma------------tdrekEMRERRRek------- 365 Postia placenta...
XP_775274    331 ALALAHKWLGIDAGengkgakvGEALAWVKDAQGRLEDLEDskmraklkg------lsigksreRKKEERRarmg----- 399 Cryptococcus ne...
XP_505518    320 AEGFVFKHMAIQAYenn---qiGKAVGAAYAAILQLEDVKIp----------------------QKSALYIpv------- 367 Yarrowia lipoly...
XP_001830711 300 HEALGHKWLGVAAGenggsekgGEAVGFVAWAKKELEELKSsgqlvs-----------lgkgdkEVRGMKKtk------- 361 Coprinopsis cin...
Feature 1                                                               # # # #     
Q9P905       389 vdkgglgpgdnagreEEGRVLEMLETKWVRANDTLNTQLIPSSadyvaNLPSGRDVLPPQPPYTPPS 455 Emericella nidulans
CBI58400     379 --------gadagrlEETRVYEMLWEKWSKQNDTIMTQVVPPSgpllqQMPMGREIHTLKPFQPPQL 437 Sordaria macrospora
XP_385784    364 --------gsdagklEEIRVLEMLDVKWNKVNDTMNTQLVPPIntllsKMPSGREIHTVKPYEVPSL 422 Gibberella zeae PH-1
XP_001938336 362 --------gtdagkfEEGRIVDMLLKKWEKQNDTVGVQVIPPSepllaSMPSGREYHTTKMFVVPAL 420 Pyrenophora tritici-repentis...
XP_001585070 371 --------gsdagkaEEARVLEMLEKKWVKMNDTIGTQLIPSIgtlisSLPSGREMHTLKMYNPPGL 429 Sclerotinia sclerotiorum 198...
XP_002835796 366 ----------dagrvDEEKTLDALEGRWKKLNDSVMFQKCPDLeelmgRMPTGRELHQSIKSWEPPK 422 Tuber melanosporum Mel28
CAZ04931     495 -----------gvveQELATVTHWLVSYRKLNDTVAFQRVPASdevtsNVPAGRPALGAKPYTLPSP 550 Ustilago maydis
XP_003027172 361 -------------vaDELATVNTFLKHYKKTNDSIHFQPVPTQpelqsRIPAGRAAVAAKPYVPPMP 414 Schizophyllum commune H4-8
XP_002469340 366 -------------vvEELESVNVFLKGYKNMNDTVSFQPVPPQsdlqaSIPAGRAAVASKIYSKPIP 419 Postia placenta Mad-698-R
XP_775274    400 ------------rveRELEVVKAWVKAYQKMNDTVAFQPVPPVss--lVTPSGRPIFGPKAFIPPPS 452 Cryptococcus neoformans var....
XP_505518    368 --------------tHLKETLNRHHADYKADNDRLSFEPVPSPselaqEWPSGRQVISAQKWTPQTS 420 Yarrowia lipolytica CLIB122
XP_001830711 362 -------------laDEIATLDVFLKHYKKMNDSVHFQPVPSQadlqrLIPTGTAAVATTAYSPPQA 415 Coprinopsis cinerea okayama7...

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