1DMS


Conserved Protein Domain Family
bisC_fam

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TIGR00509: bisC_fam 
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molybdopterin guanine dinucleotide-containing S/N-oxide reductases
This enzyme family shares sequence similarity and a requirement for a molydenum cofactor as the only prosthetic group. The form of the cofactor is a single molybdenum atom coordinated by two molybdopterin guanine dinucleotide molecules. Members of the family include biotin sulfoxide reductase, dimethylsulfoxide reductase, and trimethylamine-N-oxide reductase, although a single member may show all those activities and related activities; it may not be possible to resolve the primary function for members of this family by sequence comparison alone. A number of similar molybdoproteins in which the N-terminal region contains a CXXXC motif and may bind an iron-sulfur cluster are excluded from this set, including formate dehydrogenases and nitrate reductases. Also excluded is the A chain of a heteromeric, anaerobic DMSO reductase, which also contains the CXXXC motif.
Statistics
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PSSM-Id: 273110
Aligned: 8 rows
Threshold Bit Score: 1159.52
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DMS_A        11 GSHWGVFTATVENGRATAFTPWEKDPHPTPMLEGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVSWDQAL 90  Rhodobacter cap...
P44798        51 AAHWGSIGVVVQDGKVVKSGPAIEPAVPNELQTVVADQLYSERRVKCPMVRKGFLANPGKSDTTMRGRDEWVRVSWDEAL 130 Haemophilus inf...
P54934         1 ----------------MGVEPFAHDPAPSELIHSVPACGSPERRVMRPMVREGWLADRQHSDRRGRGRERFLPVSWDAAL 64  Rhodobacter sph...
WP_000176781  41 AGRWGAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNP-LQPAKGRGEDTYVQVSWEQAL 119 Escherichia coli
WP_000028305  37 ATHFGPFIAKVQNGVIKDIVPQKSDYNPTMMLKAMVDRVYSDSRVKYPCVRKSFLENK-KNHKELRGREEFVRVSWDVAL 115 Helicobacter py...
WP_015289861   7 ATHWGVFTARVHDGDIAAVAALASDTNPAPQLQNLPGAVRHRSRIANPAVRRGWLQHG-PGPSSARGAEEFVEVSWDELI 85  Mycobacterium c...
Q52675        53 GSHWGVFTATVENGRATAFTPWEKDPHPTPMLEGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVSWDQAL 132 Rhodobacter cap...
P33225        56 GSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEAL 135 Escherichia col...
1DMS_A        91 DLVAAEVKRVEETYGPQGVFGGSyG-WKSPGRLHNCTTLLRRMLTL-AGGYVNGAGDYSTGAAQVIMPHVVGT--LEVYE 166 Rhodobacter cap...
P44798       131 DLVHNQLKRVRDEHGSTGIFAGSyG-WFSCGSLHASRTLLQRYMNA-TGGFVGHKGDYSTGAAQVIMPHVLGT--IEVYE 206 Haemophilus inf...
P54934        65 DLVAGEIRRVSADHGNAAIFAGSyG-WTSCGRFHHASTLLKRMLNL-VGGFTGHVDTYSIAAGPVILRHTLGDd-RACGG 141 Rhodobacter sph...
WP_000176781 120 KLIHEQHDRIRKANGPSAIFAGSyG-WRSSGVLHKAQTLLQRYMNL-AGGYSGHSGDYSTGAAQVIMPHVVGS--VEVYE 195 Escherichia coli
WP_000028305 116 DLAAKKLKEIPKEN----IYNASyGgWGHAGSLHRCHHLAWRFFNTtLGGAIGTDGEYSNGAAARINPMIVGD--MEVYS 189 Helicobacter py...
WP_015289861  86 ELLASELRRTVDRYGNEAIYGSSyG-WASAGRFHHAQSQVHRFLNM-LGGYTASRHSYSAGASEVIFPHIVGAalFAALA 163 Mycobacterium c...
Q52675       133 DLVaAEVKRVEETYGPQGVFGGSyG-WKSPGRLHNCTTLLRRMLTL-AGGYVNGAGDYSTGAAQVIMPHVVGT--LEVYE 208 Rhodobacter cap...
P33225       136 DMFYEELERVQKTHGPSALLTAS-G-WQSTGMFHNASGMLAKAIAL-HGNSVGTGGDYSTGAAQVILPRVVGS--MEVYE 210 Escherichia col...
1DMS_A       167 QQTAWPVLAENTEVMVFWAADPIKTSQ-IGWVIPEHGAYPGLEALKAKGTK----VIVIDPVRTKTVEFF--G-----AD 234 Rhodobacter cap...
P44798       207 QQTSWESILESSDIIVLWSANPLTTMR-IAWMSTDQKGIEYFKKFQASGKR----IICIDPQKSETCQML--N-----AE 274 Haemophilus inf...
P54934       142 QANTLDSIAEHSQTLVVFGAMSPRTAQsEAGGIGAHHLETYLRRIVERGVR----VILVSPLKDDLPDWV--A-----AE 210 Rhodobacter sph...
WP_000176781 196 QQTSWPLILENSQVVVLWGMNPLNTLK-IAWSSTDEQGLEYFHQLKKSGKP----VIAIDPIRSETIEFFddN-----AT 265 Escherichia coli
WP_000028305 190 QQTTHEEMIKNCKVYVMWGADLLKCNR-IDYFVPNHVNDSYYPKYKRAGIK----FISIDPIYTETAQAF--S-----AE 257 Helicobacter py...
WP_015289861 164 ETTTWDVIVDHTELLVAFGGLPVKNTAvMPGGTTAHPDRDYVGRYRARGGR----LVSVSPLRDDITAIA--GplddrCR 237 Mycobacterium c...
Q52675       209 QQTAWPVLAENTEVMVFWAADPIKTSQ-IGWVIPEHGAYPGLEALKAKGTK----VIVIDPVRTKTVEFF--G-----AD 276 Rhodobacter cap...
P33225       211 QQTSWPLVLQNSKTIVLWGSDLLKNQQ-ANWWCPDHDVYEYYAQLKAKVAAgeieVISIDPVVTSTHEYL--Gre--hVK 285 Escherichia col...
1DMS_A       235 HVTPKPQTDVAIMLGMAHTLVAEDLYDKDFIANYTSGFDKFLPYLMGETDSTPKTAEWASDISGVPAETIKELARLFKSK 314 Rhodobacter cap...
P44798       275 WIPVNTATDVPLMLGIAHTLVEQGKHDKDFLKKYTSGYAKFEEYLLGKTDGQPKTAEWAAKICGVPAETIKQLAADFASK 354 Haemophilus inf...
P54934       211 WWPIRPNTDTALMLGLAGEIVRSGRQDSDFLARCTSGSELYLAYLRGEGDGRPKDAEWASTITGLPAEAIRALAGDLPRT 290 Rhodobacter sph...
WP_000176781 266 WIAPNMGTDVALMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWAAEITGVPEAQIVKLAELMAAN 345 Escherichia coli
WP_000028305 258 WIPIRPNTDVALMLGMMHYLYTSNQYDKAFIAKYTDGFDKFLPYLLGESDNAPKTLEWASQITGVSAEKIKELADLFVSK 337 Helicobacter py...
WP_015289861 238 WLAPVPGTDVAIMLGLAYVLATESLADRAFLGRYCTGYERFERYLLGLDDGVPKTPEWAAALSGLAAGDLRDLARRMAEH 317 Mycobacterium c...
Q52675       277 HVTPKPQTDVAIMLGMAHTLVAEDLYDKDFIANYTSGFDKFLPYLMGETDSTPKTAEWASDISGVPAETIKELARLFISK 356 Rhodobacter cap...
P33225       286 HIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAAN 365 Escherichia col...
1DMS_A       315 RTMLAAGWSMQRMHHGEQAHWMLVTLASMLGQIGLPGGGFGLSYHYSG-G-GTPSSSG--PALSGITDGGAAT--KGPEW 388 Rhodobacter cap...
P44798       355 RTMLMGGWGMQRQRHGEQTHWMLVTLASMLGQIGLPGGGFGLSYHYSN-G-GVPTATG--GIIGSITASPSGKagAKTWL 430 Haemophilus inf...
P54934       291 RSMLTVSWSLQRAHHGEQPFWAALGLAAVIGQIGRPGGGVGYGYGSLG-GvGAPFTIGksPAMSQLSKPINS-------- 361 Rhodobacter sph...
WP_000176781 346 RTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSN-G-GNPTRVG--GVLPEMSAAIAGh--ASEAA 419 Escherichia coli
WP_000028305 338 RTFLAGNWAMQRAQYGEQPDWALIVLASMIGQVGLSGGGFGFSMHYGG-NaQASSGARivPMISQGHNSVKS-------- 408 Helicobacter py...
WP_015289861 318 RTLITTSLSLQRIEHGEQTVWMAATLAAMLGQIGLPGGGFGHGYSSNGvG-NPPLACGl-PALPQGGNPVS--------- 386 Mycobacterium c...
Q52675       357 RTMLAAGWSMQRMHHGEQAHWMLVTLASMLGQIGLPGGGFGLSYHYSG-G-GTPSTSG--PALSGITDGGAAt--KGPEW 430 Rhodobacter cap...
P33225       366 RTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNG-A-GTPGRKG--VILSGFSGSTSIPpvHDNSD 441 Escherichia col...
1DMS_A       389 LAASgASVIPVARVVDMLENPGAEFDFNGTRSKFPDVKMAYWVGGNPFVHHQDRNRMVKAWEKLETFIVHDFQWTPTARH 468 Rhodobacter cap...
P44798       431 DDTS-KSAFPLARIADVLLHPGKKIQYNGTEITYPDIKAVYWAGGNPFVHHQDTNTLVKAFQKPDVVIVNEVNWTPTARM 509 Haemophilus inf...
P54934       362 -------FIPVARISDMLLNPGGPYSYEGEDRRYPDIRLVYWSGGNPFHHHQDLNRLSEAWTRPETIIVQDPMFTATAKR 434 Rhodobacter sph...
WP_000176781 420 DDGG-MTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKH 498 Escherichia coli
WP_000028305 409 -------VIPASRVSEAILNPDKEIDFMGKKLKLPKIKMIYNCGADLLGHETDTNELIRALRTLDCVIVHEPWWTPTAKF 481 Helicobacter py...
WP_015289861 387 ------TFIPVAAISELLTRPSQRLAYNGRLLELPDIKCVYWAGGNPFHHHQNLPRLRRALSRVDTIVVHEQYWTAMAKH 460 Mycobacterium c...
Q52675       431 LAASgASVIPVARVVDMLENPGAEFDFNGTRSKFPDVKMAYWVGGNPFVHHQDRNRMVKAWEKLETFIVHDFQWTPTARH 510 Rhodobacter cap...
P33225       442 YKGY-SSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRF 520 Escherichia col...
1DMS_A       469 ADIVLPATTSYERNDIETIGDYSNTGILAMKKIVEPLYEARSDYDIFAAVAERLg---KGKEFTEGKDEMGWIKSFYDDA 545 Rhodobacter cap...
P44798       510 ADIVLPATTSYERNDLTMAGDYSMMSVYPMKQVVPPQFEAKNDYDIFVELAKRAg---VEEQYTEGKTEMEWLEEFYNAA 586 Haemophilus inf...
P54934       435 ADIVLPASTSIERNDL--AGNKRSDFILAMGQAIAPLGEARSDFDIFNALSGKLg---VAAAFNEGRDEMGWIRHLYEES 509 Rhodobacter sph...
WP_000176781 499 ADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLkp-gGKEIYTEGKDEMAWLKFFYDAA 577 Escherichia coli
WP_000028305 482 ADIVFASTSTVERDDIAFGGSYSKNVVYAMRKVVEPVYESKDDYEIFRQLALRIggneTEQKFTESKSYMEWIKGLYEKS 561 Helicobacter py...
WP_015289861 461 ADIVVPTTTSFERDDF--AGSRTDPVLVAMPAMVPRYANARDDYDTFSALAHGLg---FGERFTEGRTAREWLEHLYEKW 535 Mycobacterium c...
Q52675       511 ADIVLPATTSYERNDIETIGDYSNTGILAMKKIVEPLYEARSDYDIFAAVAERLg---KGKEFTEGKDEMGWIKSFYDDA 587 Rhodobacter cap...
P33225       521 ADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFn---REEAFTEGLDEMGWLKRIWQEG 597 Escherichia col...
1DMS_A       546 AKQGKA-GGV-EMPAFDAFWAEG-IVEFPVTDg-aDFVRYASFREDPLLNPLGTPTGLIEIYSKNIEKMGYDDCPAHPTW 621 Rhodobacter cap...
P44798       587 FSAARA-NRV-AMPRFDKFWAENkPLSFEAGEaakKWVRYGEFREDPLLNPLGTPSGKIEIFSDVVEKMNYNDCKGHPSW 664 Haemophilus inf...
P54934       510 RNHAQRhHHF-EMPDFETFWAQG-HAPCPVQR---DHTYLAAFREDPGAHPLDTESGLIVLGSATLARLGYADCGPHPAW 584 Rhodobacter sph...
WP_000176781 578 QKGARA-QRV-TMPMFNAFWQQNkLIEMRHSEkneQYVRYGDFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTW 655 Escherichia coli
WP_000028305 562 -------DGP-TLKSFDQFWRDG-FVEFEIPEnarKFVRHAKFRQDPINNKLDTESGKIQIFSQKCADFKLADFKGHPTW 632 Helicobacter py...
WP_015289861 536 SAELD----F-PVPSFAEFWRTG-RLELPTRTg---LTWLADFRADPAAHPLGTPSGRIEIFSDTVDAFALPDCAGHPTW 606 Mycobacterium c...
Q52675       588 AKQGK--AGGvEMPAFDAFWAEG-IVEFPVTDg-aDFVRYASFREDPLLNPLGTPTGLIEIYSKNIEKMGYDDCPAHPTW 663 Rhodobacter cap...
P33225       598 VQQGKG-RGV-HLPAFDDFWNNKeYVEFDHPQ---MFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMW 672 Escherichia col...
1DMS_A       622 MEPLERLDGPg--aKYPLHIAASHPFNRLHS---Q----LNGTVLREGYAVQGHEPCLMHPDDAAARGIADGDVVRVHND 692 Rhodobacter cap...
P44798       665 MEPEEFAGNVt--eEYPLALVTPHPYYRLHS---Q----LAHTSLRQKYAVNDREPVMIHPEDAAARGIKDGDIVRIHSK 735 Haemophilus inf...
P54934       585 IEPAEWLGKAqa---gELHLISHQPKGRLHS---Q----LETAEASLAGKREGRDEVMLHPDDASVRGIADGQTVRLWNA 654 Rhodobacter sph...
WP_000176781 656 LAPDEWKGTAde---kqLQLLTAHPAHRLHS---Q----LNYAELRKKYAIADREPITIHTEDAARFGIANGDLVRVWNK 725 Escherichia coli
WP_000028305 633 FEPAEWLGSkm-aeIYPFHLISPHPKYRVNS---Q----LDNTWVRNVYKIQGREPVMINELDANKLGIRHGEIVEVFNA 704 Helicobacter py...
WP_015289861 607 YEPSEWLGGpr-aaLYPLHLIANQPRTRLHS---Q----LDHGGASMASKILGREPIRIHPDDAAARELTDGDIVRVFND 678 Mycobacterium c...
Q52675       664 MEPLERLDGpg--aKYPLHIAAS-------HpfnRlhsqLNGTVLREGYAVQGHEPCLMHPDDAAARGIADGDVVRVHND 734 Rhodobacter cap...
P33225       673 FEKIERSHGGpgsqKYPLHLQSVHPDFRLHSq--L----CESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNA 746 Escherichia col...
1DMS_A       693 RGQILTGVKVTDAVMKGVIQIYEGGWYDPSDVTEAG-TLDKYGDVNVLSADIGTSKLAQGNCGQTVLAEVEKY-TGPA-V 769 Rhodobacter cap...
P44798       736 RGQVLAGAAVTENIIKGTVALHEGAWYDPMYLGESEkPLCKNGCANVLTRDEGTSKLAQGNSPNTCIVQIEKF-IGVA-P 813 Haemophilus inf...
P54934       655 RGACLATAQVTDSVAAGVAILPTGAWFTPAEAE----GPELSGNPNVLTLDIGSSAFGQGCSAHTCLVRIEAH-AGDAgD 729 Rhodobacter sph...
WP_000176781 726 RGQILTGAVVTDGIKKGVVCVHEGAWPDLE-----N-GLCKNGSANVLTADIPSSQLANACAGNSALVYIEKY-TGNA-P 797 Escherichia coli
WP_000028305 705 RGRLLAGAFVTKNIRQGVLSIQKGAWYDPEDERVRN-PRCNAGHVNTLTSLRPTSSMTQAISANTALVNIRRLrRYELvK 783 Helicobacter py...
WP_015289861 679 RGACLAGVVIDDGLRPQVVQLSTGAWFDPADPRDPD-CMCVHGNPNALSNDSGTSSLAHGSTGQHVLVQIERF-TGRL-P 755 Mycobacterium c...
Q52675       735 RGQILTGVKVTDAVMKGVIQIYEGGWYDPSDVTEPG-TLDKYGDVNVLSADIGTSKLAQGNCGQTVLAEVEKY-TGPA-V 811 Rhodobacter cap...
P33225       747 RGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPG-ALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKY-NGTV-E 823 Escherichia col...
1DMS_A       770 TLTGFVAPKAA 780 Rhodobacter capsulatus
P44798       814 EVTVFKQPKQV 824 Haemophilus influenzae Rd KW20
P54934       730 AVRIYDAHLAA 740 Rhodobacter sphaeroides
WP_000176781 798 KLTAFDQPAVQ 808 Escherichia coli
WP_000028305 784 PYHSISTPSII 794 Helicobacter pylori
WP_015289861 756 PLHAHEPPALV 766 Mycobacterium canettii
Q52675       812 TLTGF-VAPKA 821 Rhodobacter capsulatus
P33225       824 QVTAFNGPVEM 834 Escherichia coli K-12
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