Conserved Protein Domain Family
RimM

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COG0806: RimM 
Ribosomal 30S subunit maturation factor RimM, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis]
Ribosomal 30S subunit maturation factor RimM, required for 16S rRNA processing is part of the Pathway/BioSystem: 16S rRNA modification
Statistics
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PSSM-Id: 440569
Aligned: 962 rows
Threshold Bit Score: 66.6711
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015153579  18 QIPDG--WLAIGTIVAPQGLDGEVRVYPDSD-FPE-RFIEPGQRwl--lrP-GKte-----------pePIELIEG-Rdi 78 
WP_011902363   5 SL-DN--LIELGAISEAQGLQGQVKVRPHSP-DPV-ALLSSKVVwls---llPRrsagalssteeatltQYKVKSA-K-- 73 
WP_023026062   1 MENKN--LLSIGKIVNTFGIKGAVKIALEKNiEVN-DINGIKLLfi--enT-NNvi------------iPKQVESI-S-- 59 
WP_016338648   1 --MKN--LIKVFTIKKPHGIKGEVKVVGLINlKTY-ATVDNKLAfi-----kTGet-----------fiPVTVVKV-F-- 56 
WP_038499710   1 MDS-N--LIELGYVSGAFGIKGMVKLKVYCH-PQDsILFSQKECylsllnQrNSet------------kKLTIQQI-K-- 61 
WP_025734581   1 -MQEK--LMRIGEIVNTVGIKGTVKVLLDSNlDIN-DLSNFKLCfy--qtN-SKvf------------iPLQIKTL-E-- 58 
WP_020915610  13 IfTKD--LITIGVVLRAYGIFGWILIKLFLD-DKN-IFFYARKIwf--fdP-NSlk-----------lfSIKILNK-K-- 71 
NP_603191      1 M---E--LLIAGKVLGSHNLKGEVKVISDLD-NIE-VLVGNKVIle----laDSqq------------kLLTIKKI-E-- 54 
WP_012861500   1 M---E--LVNIGTITGTHHLNGAVKVTSIFQ-DTD-VIISEKVLle-----kNNdk------------kLCTVKSVkR-- 54 
WP_015425174   1 M--KHppLIGIGKLGR-QNADGFHPVMIkPE-YRS-VFSELEDLyli-fnS-Drv-------------fyVTISE--R-- 56 
WP_015153579  79 PG--K-GLYVVALEGIEDRSQAEALRDCVLLVPESDRPE-LGEDE-YHVV-DLIGLEVFLqETG---------------- 136
WP_011902363  74 MH--S-GNVVLTLDGVSDRDQALALKGARILLDRDAFPK-AESDS-YYWV-DLIGCKAKN-LQD---------------- 130
WP_023026062  60 MQ--K-SHLVVYFKEHNHINEVEIFKGKKVKYLNDN-------DA-FSIFyDLTYYSVVY-NNQ---------------- 111
WP_016338648  57 GT--I-DKLVMRLKEYCNINDVIKFQGCDVYFKKDDV------GDiPVLT-SLIGYQVIK--DD---------------- 108
WP_038499710  62 LH--G-DEIICQFEGINDRDAAQALRGYTVQVARDDFPE-TDDET-FYWV-DLIGCDVFY-ANEeqderlfagpesqefe 134
WP_025734581  59 VK--N-NTLLISFIDFENINDVQKFRNQILYAPIEI-------QA-FSLIpHWTEYKIET-ELG---------------- 110
WP_020915610  72 NH--G-NYVLANLYGITDRNLATKLQGYYLKISINDFPKlLSSDT-FYWF-NLIDCIVEN-IHG---------------- 129
NP_603191     55 -HlvA-NKWIFSFEEIKNKQDTIEIRNANIKVRRDIV-G-IGEDE-YLVS-DMIGFKVYD-VKGd--------------- 112
WP_012861500  55 IN--N-KKLIVEFSEISNINDAKSLNGYQVKIRRDLLPE-KTEED-FYYN-DLLGMKVFE--KE---------------- 110
WP_015425174  57 MR--KdNKTWIKL--KEDGVSEEQFLHKDVVIAIDE-TA-IETEE-TSLN-YLIGYQVIF--AG---------------- 110
WP_015153579 137 ---------ESIGTVTDVIPAG-NDLLEV--QLhqeaksqksevkisdpplptpdyavpmrrtpppppasqlpTH----- 199
WP_011902363 131 ---------EILGDVIDVTENGaHGVIAI--GDi--------------------------------------sTK----- 156
WP_023026062 112 ---------N--GKVIETMFNGnHDLVKVllE-----------------------------------------NE----- 134
WP_016338648 109 ---------QIIGTVIDQLETKaHPILRI--KDl---------------------------------------QS----- 133
WP_038499710 135 eidpiaealTYMGKVRTVSENGvHAILHV--C-----------------------------------------PE----- 166
WP_025734581 111 ---------E--GIVIDWMNNSvQYLIKIrvQ-----------------------------------------NH----- 133
WP_020915610 130 ---------KLLGTVTEIIQNKvHSILRIi-Qs---------------------------------------sTEiictk 160
NP_603191    113 ---------EYLGEITEIMDTAaHDIYVI--ES-----------------------------------------E----- 135
WP_012861500 111 ---------EYLGDILDTMETAaHDILVV--VN----------------------------------------SD----- 134
WP_015425174 111 ---------EELGIVEDFFFNGaQDVLQI--VD----------------------------------------SK----- 134
WP_015153579 200 --PR--K-V-----------------LIPFVKAIAPVV--DleMRRIEIAPP-PGL 230
WP_011902363 157 --TI--Q-Y-----------------LVPFVKEVVRNV--DlpNKLLTLDWQ-SDW 187
WP_023026062 135 --EK--A-F-----------------WVPLVDVYINNI--DdeSRIITLKNI-EGL 165
WP_016338648 134 --DQ--I-M-----------------LIPIVKEYVQTI--DetTRSVILDKV-I-- 162
WP_038499710 167 ---V--ElAdgqkdfkrtpkgqyvdqLIPFVRQRVPYV--DlqTAVIITDIPpEN- 214
WP_025734581 134 --D-----F-----------------WVPMVDEYLVVK--NdeTKTIQLKNI-RGL 162
WP_020915610 161 kyKKkyG-I-----------------LIPFIKIFIKNV--DiiKKKIIVDWD---- 192
NP_603191    136 --EF--E-T-----------------MIPDVDVFIKNI--DfeNRKMLVDTI-EGM 166
WP_012861500 135 --GR--E-I-----------------LVPMVDIFVKKI--DfeAGKIEVELI-EGM 165
WP_015425174 135 --GT--E-Y-----------------LVPFVDYYIDTVidNl--RCVILQNA-LDL 165
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