Conserved Protein Domain Family
OMP_b-brl_2

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pfam13568: OMP_b-brl_2 
Outer membrane protein beta-barrel domain
This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.
Statistics
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PSSM-Id: 433316
Aligned: 36 rows
Threshold Bit Score: 52.7895
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011586774                 23 FSQfS-------------FGVGTTLGLGYlrsSQLKQgaqvikdqnPSIENLDYKVRASAQIGFqgVVQYRF--A-H--Q 84  ...
WP_005859999                 18 sAQ-Sr------------WGITPEGGFAA---VNRVG---------MG-----SSWRAGVKVGV--GVSYQF--E-P--G 60  ...
Q7MXS7                       22 QES-Nasvr------pslWEFSSRVGMHV---GASTPvpv---pqaM-EHVYAWYPRLNPMVQL--SASRRLlaG-S--P 82  ...
WGS:ACWZ:HMPREF0669_00707.1  19 YAQ-SdrttslvnsekngWEYEVRAGVNI---GGATPmpm----paEIRKIKSYSPKFNGTIEG--VVTYWF--D-G--N 83 
wustl:BD2000                 20 kAQ-QernqgiiwsslrgLEYTVKAGINI---GGTAPvpl----prEIRAIDSYRPTLCVSIEG--DIKKWF--G-EskE 86 
Q8A604                       20 gysqvdrnetlirsalhgLEYEIKAGFSI---GGTAPlpl----pvEIRSIDGYNPTLAISIGG--EVTKWFavQ-N--K 87  ...
jgi:Phep_4274                18 WAQ-Nrpdsta--snggrLQVSAFGGLSMp-lGKYKN---------E-----IGRAKNGYFAGL--AIDQYF--KgN--K 73 
WP_011963405                 17 FSQ-Dri----------yIAAELEGGFLI---THYKSqsp---slsSIVNEKEKNHNIKISASV--ILE--W--D-N--K 70  ...
WP_013305331                 18 FGQ-Slnerea--adskyLEDQFYLGVTY---NFLLN---------KPDDFKQTNLSYGLQGGF--IKDIPL--N-PdrT 77  ...
WP_015481923                 18 NAQ-Kdslql----gdrySEDHLYASISY---AQLMN---------QPTGITRSGFSYGISLGF--IKDFTL--N-KqgN 75  ...
WP_011586774                 85 ---W-CVVASPGFNLFRSTFNNIf--IS-N----D-----Tvsgsey----ithkvLSTATFKSTQLVLPILAKYYI-IP 143 ...
WP_005859999                 61 ---WiGLKSGLYYANRGYSLGDYprtTE-S----AtyvlkE---------------MMTGGITQHFLQLPVMADFSW-KV 116 ...
Q7MXS7                       83 ---W-AVNVGIAVEKKGMEATTRvkdmkvai-vsdspyagNpdeeyp----glftgDNNTEIRLGYLTIPVQAEYNM-LK 152 ...
WGS:ACWZ:HMPREF0669_00707.1  84 sspW-GLSTGLKVEEKGMITEAGvks-----------ystEiiqgsqr-vagyytgNVKTQYNSTLLTLPVMANYRF-ND 149
wustl:BD2000                 87 ---W-GMMIGLRLENKGMETKATv-kNY-S----M-----EiigsggeklkgnwtgGVQTKVENSYFSIPVVALYQL-NN 150
Q8A604                       88 ---L-GVIVGLRLENKAMTTEATv-kNY-N----M-----EilgqggerisgvwtgGVKTKVHTSGLTIPLMATYKL-SN 151 ...
jgi:Phep_4274                74 ---W-GIGLDARFLNHEMRKFDSv-fFA-N----Ghi--aT---------------AYKNHPSFQHIALSVGPTYKV-GF 125
WP_011963405                 71 ---M-SFEAGIAQNMRQWNILGKk-----P----N-----S---------------TLEVKQTQYFPSVFVGGYYDIpFN 117 ...
WP_013305331                 78 ---F-AIGLGLGYAVNSYY-SNLwasksaagidySfi-eeDvivls-----edelsVKRNKIETHLVELPLEFRWRN-SS 145 ...
WP_015481923                 76 ---I-AVAVGVGYGYDFFNHELKv-eDV-N----G-----Nttfd-------sgidLESNKFSAHNLEIPIEFRWRT-ST 132 ...
WP_011586774                144 D---KNYFATAGIQFAYNTG-MRL--------SSREDSITSYynetdlia---------------snkvdidYNKVk--- 193 ...
WP_005859999                117 Sk-eVRMHLAVGMYAGVSVKnDTN--------WGSSFTMGYSkepqalgkyvkstglgysygyghsgydeaeNADHp--- 184 ...
Q7MXS7                      153 ----DRLKLRGGLYTSLLLE-SSFrviidgtmV-------YDdpklg--------------------taqmdLRELn--f 198 ...
WGS:ACWZ:HMPREF0669_00707.1 150 -----QWKVRAGLYVAYRLD-GEF--------AGTVSN---Gylregnptg------------ekvlfegdaIASYn--f 198
wustl:BD2000                151 -----RVSFSAGPFVSFATN-RNF--------SGY---VYDGylreinptg------------tkvefsgdnRASYd--f 199
Q8A604                      152 -----RWNIKAGPYFSYLLS-REF--------SGH---VYEGylregdpvg------------pkveftdgkIATYd--f 200 ...
jgi:Phep_4274               126 ----GKLDFEAFLRGGVLFE-GFP--------QYTQSIYVNAasgpp---------------------vktfDNYYtsns 171
WP_011963405                118 As-nTNLRFYIGSKLSADFL-NYN--------SLNKTDGTDL------------------------------DNVNs--v 155 ...
WP_013305331                146 AteyKFWRVYSGIKLGYIFG-SRS--------KLVT---SEE------------------------------KTSFv--- 180 ...
WP_015481923                133 AkkyDFWRIYPGIKFLYNFS-NNF--------NFID-NN--T------------------------------SFSFd--d 168 ...
WP_011586774                194 VDGYKPFQAHLILGVGTSvltgYRRN--LDLQLSYYIPLTSSHY 235 Cytophaga hutchinsonii
WP_005859999                185 FRDVNSFDWGLTTSFGIE----VN-N--WVMNLGYDLSLGDEgg 221 Parabacteroides
Q7MXS7                      199 SDKIKGADFGVIIGADYY----FARQ--IGAFADVTFGLIPLTG 236 Porphyromonas gingivalis
WGS:ACWZ:HMPREF0669_00707.1 199 SNELRRFQWGMQLGGSWR----AFKH--FTVNADLTYNINGIFK 236
wustl:BD2000                200 SDNLRKFQWGAQIGTEWK----AFKH--LIVYADLTWGLNDIFQ 237
Q8A604                      201 SDDLRHFQWGLQIGAGWR----AFKH--LNIYADLTWGLNDIFr 238 Bacteroides thetaiotaomicron
jgi:Phep_4274               172 KEKTKSWMGLGGLRLSYG----LGDHlaLFVQADYLRAFGKSFG 211
WP_011963405                156 TEESNKFAFNVIPEIGIKg--rFKNGniWLFGIKYCHPLSKNIL 197 Flavobacterium psychrophilum
WP_013305331                181 NSDVRKLQYGLMFNFGYN----TF-------NVHIYYALNNLFE 213 Maribacter sp. HTCC2170
WP_015481923                169 VASYRKLQYGLTLSAGYD----EF-------NFHVYYSLTPLFE 201 Polaribacter sp. MED152
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