6J7N


Conserved Protein Domain Family
AbiEii

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pfam08843: AbiEii 
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Nucleotidyl transferase AbiEii toxin, Type IV TA system
This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.
Statistics
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PSSM-Id: 430254
Aligned: 168 rows
Threshold Bit Score: 37.1815
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6J7N_A             64 QFAATl--TDDTGAPLLLVKGGSS--LELRRGi--PDSRTSKDFA------TVARRDIELIHEQLADAGETGWEGFTAIF 131 Mycobacter...
jgilanl:CHU1009    17 KLMQA------DEFKDFRLVGGTA--LSLHIG-----HRMSIDIDlft-daEYSSVDFERIEKFLINTFRFVHGDFGNKK 82 
EDM38929           16 VLMQE------PIFKHFRLVGGTA--LSLQFG-----HRISVDIDlft-daIYGSIDFKIIEQYMLNNFTYVSTNFGVNP 81 
Q0AYA4             12 PILDRlveCDILTDRGFYLAGGTA--LAIQLG-----HRISVDLDffsvddFEPQNLLISLNESLGEIKVINMSKGTLNF 84  Syntrophom...
Q138J1             18 QIWRS---LEPAGDLNFVLYGGTA--VALHLG-----HRISIDFDf----fRSQPLDKSELAEAFPLIKDAAII------ 77  Rhodopseud...
jgi:Bcen1808_2162  16 KLWPD---LAPVKDLGFTLYGGTA--IALRRG-----HRTSVDFDffsdrpLDKQALVAALPALEGPGAEVLQESANTFV 85 
WP_012363864       27 QAVGT---TCVQLDTAFVVAGATArdILMWHVhgiRPVRATRDVDva--vcAVSWPFHERLVDALVATGQFARAPKHQQK 101 Burkholder...
Q63YV1             19 RDVKH---ACAQLGAKFVLAGATArdILMWHLhdiRAPVATRDVDva--vcAVSWESHDALIELLVQTQRFRRH--SKQ- 90  Burkholder...
jgi:Pnap_2737       3 ADVEA---VAAPMGIAIVITGAFArdLHLLYGygiDMQRKTEDIDfg--laVPDWAAFVALKERLTASGAFQASATVAHR 77 
Q8XT48             19 IIMDR---VARQANLRYLVVGATArdILMYHLhgfPLNRASPDIDfa--iaVESWSAFDGLRAALLQEPTLRPDAKIPHR 93  Ralstonia ...
6J7N_A            132 TAPEEI----------DVPGMPVkprRFTAKLs----yRGRAFATVPIE-Vssv------eagNADQFDTLTSDALGLvg 190 Mycobacter...
jgilanl:CHU1009    83 G---------------MGKSYLI---------------GTDLEHAVKLD-----------------VYYSMDPFFQNTv- 114
EDM38929           82 A---------------FGTSYLV---------------GSDSQNAVKVD-Iyy--------smDPF----FQPAIETE-- 116
Q0AYA4             85 VI--------------NGEKVSF------------------------IR--------------YPYKNIYLPLDFRGC-- 110 Syntrophom...
Q138J1             78 ----------------QEDKNTL---VFN---------SGVPSGRVKLS-Ffg---------gLGLGRINPPLKTTDA-- 117 Rhodopseud...
jgi:Bcen1808_2162  86 ALVQPPld------rpLLGPVAA---------------DEFGDGRVKVSfFg----------dLTIGRVGDPELTSDG-- 132
WP_012363864      102 LLFDS-----------GTRGFRT-----------------------ELDlVpfg------pleAPPGEIAWPPRGDFVln 141 Burkholder...
Q63YV1             91 -----------------QQKLLF---KRSAE-------DYEGELDI-VP-FgqiegppgeihwPPDGDIVMTVLGFQEav 141 Burkholder...
jgi:Pnap_2737      78 LR--------------HQNGLPVdlvPFGSIEtrdrtiAWPPRGDVVMDvFgfr------ealATAHPIVLPGNVQSR-- 135
Q8XT48             94 LHYSATvgegfpvdlvPFGGVEI----APAQV------AWPPDMAITMNaAgya----------ealDSAVTVYIADD-- 151 Ralstonia ...
6J7N_A            191 ---------------vpAAVAVPCMTIPWQIAQKLHAVTavleepkVNDRAHDLVDLQLLEGl---lLDADLMPt----r 248 Mycobacter...
jgilanl:CHU1009   115 -----------------EADGLRMASIEEIIAMKIDVIQ-------RGGRKKDFWDLHALLNq----HTIKGMI------ 160
EDM38929          117 --------------------GLRMASTEEILAMKIDVIQ-------RGGRKKDFWDLHELMAh----FSINSML------ 159
Q0AYA4            111 ----------------------PIADYRDIGATKLMTIS-------QRGLIRDFYDLDAVIQ-----TGISFAQi----v 152 Syntrophom...
Q138J1            118 --------------------VLLVASPEDLLATKLKAIL-------DRAEAKDYRDIAALLS-----SGVSLR------- 158 Rhodopseud...
jgi:Bcen1808_2162 133 --------------------ALLVAHPRDLMATKLKTLF-------QRIELKDYVDIHELLQ-----HGQSLTR------ 174
WP_012363864      142 vlgfqeavdtalavsigVDIAVPVASLPALALLKLLAWKd-----rRARQNSDAYDLLFLLTh----FHDAGNRer--iw 210 Burkholder...
Q63YV1            142 dtaq--------pvsigEGLVVPVVTLPAFVLLKLIAWKd-----rRLMKNTDSADLLFVLRnyidaGNIERTYeq--at 206 Burkholder...
jgi:Pnap_2737     136 -----------------------VVSLPGLALLKIVCWQdr---hyRSPR-KDAHDLQLILR-----HYLSAPNe----a 179
Q8XT48            152 -------------------CEVPVASIPGLVMTKLIAWLd-----rGQSNPKDAVDFRYLLE-----NYADAGNadrlyg 202 Ralstonia ...
6J7N_A            249 SACIAIFEAR-------------------------AQHPWPp---rVATL-PHW------------PLIYAGALEGLDHL 287 Mycobacter...
jgilanl:CHU1009   161 HLHEQRYLYThd----------------------kSLIQQNivnftKADLdFDPvc--------lkGNYWEFIKEDIEEA 210
EDM38929          160 ELHRLRYEWThe----------------------rEKILKNlidfsIADQdPDPic--------lkEKEWAFIKEDFEAA 209
Q0AYA4            153 AIMEEKYPTVkt---------------------vmPHIIRSigyfeDADNePRPlirraegfslltDLEWNEIKQRFLIL 211 Syntrophom...
Q138J1            159 RALGGFSKMFgr---------------------dpGLPLRAigffkDGDLaSVP------------EGDRQVLRAARDTI 205 Rhodopseud...
jgi:Bcen1808_2162 175 GLADAAALWPgfppgdclgalgyhqspqlhalsgaQKATLNa---kIGLAqQELs----------kMKQFTPAPKKSGQL 241
WP_012363864      211 DVAPDLLERHgfqpelaaagllardakriaspqthEAIRALl---sDEAVyATL------------AQDLQARAFALLPG 275 Burkholder...
Q63YV1            207 DLLKAANFDAglaaagllg-------rdvrglaypDTRAALrallqSADAyETL------------RLDLQARAAMLLGG 267 Burkholder...
jgi:Pnap_2737     180 RLWEEFLDWTlgddfey------------elagprMLGYDMralldEPGRdLVA------------ALLWAQADPMQPGV 235
Q8XT48            203 EELPLLAACDyafel----------------vgprLLGLDVasvasAESKrQIVdil-------adRQLYDRLVVHMLRG 259 Ralstonia ...
6J7N_A            288 ELAr-------tVDAAAQA 299 Mycobacterium tuberculosis H37Rv
jgilanl:CHU1009   211 AKLq--------------- 214
EDM38929          210 TNPdhldnlrli------- 221
Q0AYA4            212 QKnaltrelgikpeagprg 230 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
Q138J1            206 VEIp-------dVPVVFGS 217 Rhodopseudomonas palustris BisB5
jgi:Bcen1808_2162 242 GLDdaam--areRQAALSP 258
WP_012363864      276 EFNd-------dADRYLDA 287 Burkholderia ambifaria
Q63YV1            268 FIDd--------SDALLAA 278 Burkholderia pseudomallei
jgi:Pnap_2737     236 LPSemnaaeperACAWLGA 254
Q8XT48            260 EAHsdga--vekIESQLAE 276 Ralstonia solanacearum
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