3WZ4,3WZ3,3WZ5,5CNL


Conserved Protein Domain Family
IcmL

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cd16385: IcmL 
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inner membrane protein IcmL/DotI
This family contains the periplasmic domain of the inner membrane protein DotI of the Dot/Icm (defect in organelle trafficking/intracellular multiplication) type IVB secretion system, including its ortholog in the conjugation system of plasmid R64, TraM, and similar proteins. These domains share striking structural similarity to the type IV secretion system (T4ASS) component VirB8 suggesting DotI/TraM to be its functional counterpart. DotI is essential for intracellular growth of Legionella pneumophila (causing agent of Legionnaires' disease) within mammalian and protozoan cells; it translocates numerous effector proteins into its eukaryotic host.
Statistics
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PSSM-Id: 319861
Aligned: 158 rows
Threshold Bit Score: 72.6772
Created: 29-Mar-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3WZ4_A         6 SDSAVLQWANQAAIAAF--TYNFv--NYRDELQASSGFF----TAEGWDQFLGALe-qSNNLDAVKakKLVVSAVAt-rA 75  Legionella pneu...
Q5X396       301 TPSDFGNKGRKLYPNWLs-QIGLh--SSKLQLNSLITRInplpLWRVFSQYQQSIrdkSDNIEAISkqKPILSAQIe-gE 376 Legionella pneu...
AEP08765     114 NQDELAKWLDRAVAETM--SFSPa--SYPDHIKHLATGF----TPEGLAQFQAWVq-nANLIQAMEtgHLQMNGFVq-eA 183 Micavibrio aeru...
WP_015068610  83 NYTYAGDIAEDYAEDLL--SFHFl--KIDKQIQSRNSYFf---QGYFAPLYMEPLi-eSNSINKIKnqKLIVTATTv-rK 153 Alteromonas med...
WP_027222293 312 GQKFYPNWLKQIGLHSS--GLSLn--SLISQINRLPLWR----TFSQYQQSIREP---SDNMEAIKnqKPILSAQIe-gE 379 Legionella pneu...
WP_045861757  82 TDRQAMHWARDKASELL--SLSFn--SYADQIRRRKQYF----VGDGWMKYQLSLi-eNKVTETLReeGLIITAINq-dT 151 Alteromonadacea...
WP_052673933 296 TATLDSLFSTNKIKKNSpdLFDFksdILAEQLQKVVPYS----MDQCLNTLAVALd-kIKNAKVIQtkELTLKSQKn-sE 369 Legionella fall...
WP_052673933  57 EHDVVINWAKYAVIESF--NFNPs--SIDMQMSRLRSCY----TNKGWNAFINAQq-eSGNLKELKthSLYMSSQLd-gR 126 Legionella fall...
WP_058519106  76 DNALIVSWAEYAVLHSF--KFDLl--SFDAQLNNLKKCY----TKNGWTSYINALt-dSGNINSIKtqKLMVSSMLd-gK 145 Legionella pari...
WP_058519942 334 SALHNLDTIKEQSKKQFl-DIKSd--ILATKLPKLLTYF----KEKGTIGFNSALh-nLDKTKAIK--NQNPNSQHrniE 403 Legionella tucs...
3WZ4_A        76 PIILqkgvlngrYSWRVQXPILVTYQsa---------seFTQQNNVVTXLITRvstl-----nsprGIGISQFVVGP 138 Legionella pneumop...
Q5X396       377 PQFIev----keNQWDIKLPIKVVYQkd---------neRITQRLDVNLALDQkminn---ltvktKSVDSNKVLQS 437 Legionella pneumop...
AEP08765     184 PFLLnegvvngrYRWLFEIPVMISFFdkdvkfmksstqiKETRRLLVRLQIGRvasg------gleNGVLIETWEVY 254 Micavibrio aerugin...
WP_015068610 154 PRLQgvlldkgyRTFIFNIPIIQTMYgps--------gdPETKSLMLHMRLRQvvrt------eniNGLVISDLGIR 216 Alteromonas medite...
WP_027222293 380 PQFIev----keNQWGIKLPIKVVYQkd---------keRITEHLDVHLALNQkmvnnlvvknksiDSSGVLQSLTS 443 Legionella pneumop...
WP_045861757 152 PRLLqsyslngnKNWRIEMPILQTIQgas--------dtPKTVKKIVSITVEQtrrd------eaiEGLKIRVFGVI 214 Alteromonadaceae b...
WP_052673933 370 PRLVet----qnNQWDMTLPVQIVYQse---------gdNITKPLNVHLVIERka----------gGGLEITQMKTT 423 Legionella fallonii
WP_052673933 127 PELIea----seTQWKLVVPIKVIYKnd---------qeTAVHFLSIYLTIGWrs----------aFNLGITQMIAI 180 Legionella fallonii
WP_058519106 146 VQLIda----qeTQWKMNVPIKVFYKnd---------keEITHFLNVYLIISWrn----------aFKLGIVQIVAT 199 Legionella parisie...
WP_058519942 404 SQLIen----knNQWNVTLPMQVIYQnd---------knQITQLVNVNLTIGRka----------dGELAILQMNAI 457 Legionella tucsone...
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