2IXI,1EP0


Conserved Protein Domain Family
rmlC

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TIGR01221: rmlC 
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dTDP-4-dehydrorhamnose 3,5-epimerase
This enzyme participates in the biosynthesis of dTDP-L-rhamnose, often as a precursor to LPS O-antigen [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
Statistics
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PSSM-Id: 273510
Aligned: 8 rows
Threshold Bit Score: 288.139
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IXI_A         5 KATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEaCGHPVSFVQDNHSRSARGVLRGLHYQI-R-QAQGKLVRATLGE 82  Pseudomonas aer...
AAF83070       2 KVIDTALPGCLVIEPRVFDDARGEFFEAWNAECFQR-QGMSSRFVQSNVSISMYGVLRGLHYQW-P-RPQGKLVGVLEGE 78  Xylella fastidi...
P37745         2 NVIRTEIEDVLILEPRVFGDDRGFFYESFNQSAFEHiLGYPVSFVQDNHSRSSKNVLRGLHFQR-GeYAQDKLVRCTHGA 80  Escherichia col...
WP_010873214   2 NVIPTTIADVLILEPKVFGDERGFFFESYNDKVFQQaVGIEPHFVQDNHSFSRQGVVRGLHYQI-Q-HPQGKLVRVARGE 79  Synechocystis s...
WP_010981058   7 NIIDTAIPDVKLLEPQVFGDARGFFMETFRDEWFKT-QVCNRTFVQENHSKSGKGVLRGLHYQT-E-NTQGKLVRVVVGE 83  Neisseria menin...
WP_010866204   5 vFKRLEIPDIVLIKYERFSDPRGFFAELYKRTPFLA-EGIPYDFIQVNLSYSYKGVVRGLHYQLkP-HEQGKLVYVLYGR 82  Aeropyrum pernix
1EP0_A         5 RFIKTSLDGAIIIEPEVYTDERGYFMETFNEAIFQE-NGLEVRFVQDNESMSVRGVLRGLHFQR-E-KPQGKLVRVIRGE 81  Methanothermoba...
WP_010884527   7 EFKRLEIPDVVLIKPKVFEDERGFFMETYKKSDFEK-AGIKGEFVQDNHSKSKYGVLRGLHFQR-GsYAQAKIVRCIRGV 84  Pyrococcus hori...
2IXI_A        83 VFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQ 162 Pseudomonas aer...
AAF83070      79 VYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDVYVKEADAGIRWNDALIGVDWPIA 158 Xylella fastidi...
P37745        81 VFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKGFAHGFLVLSDIAEFQYKTTNYYHPESDCGICWNDERIAIDWPQT 160 Escherichia col...
WP_010873214  80 IFDVAVDLRRNSPSFGQWVGCVLNDHNKRQLWIPAGFAHGFAVLSPEAEVLYKATDYYAPSYERTLLWNDPAIGIDWSLT 159 Synechocystis s...
WP_010981058  84 VFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFCVLGDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQ 163 Neisseria menin...
WP_010866204  83 VLDVAVDIRKGSPWYGKHVSAELKP--GMALWIPPGFAHGFQALED-ALFLYLVTKEYFKDSERCIKWNDPNLEIKWPII 159 Aeropyrum pernix
1EP0_A        82 IFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCTELYHPEYDSGIPWDDPDIGIDWPLE 161 Methanothermoba...
WP_010884527  85 IYDVAVDLRRNSPTFGKYVGVILSEYNKYQLYIPRGFAHGFVVLSDVAEVVYKVDNVYAPDYEGGLIWNDPDVGIKWPIE 164 Pyrococcus hori...
2IXI_A       163 DAp--LLSEKDRQGKAFADAD 181 Pseudomonas aeruginosa
AAF83070     159 VP---LLSAKDQKAPFMEEVP 176 Xylella fastidiosa 9a5c
P37745       161 SGl--ILSPKDERLFTLDELI 179 Escherichia coli K-12
WP_010873214 160 TTp--LLSLKDQRGLPLAEAE 178 Synechocystis sp. PCC 6803
WP_010981058 164 TAp--LLSPKDLAGKTWAQAE 182 Neisseria meningitidis
WP_010866204 160 DDdkvIVSGKDRNCPPLKEAE 180 Aeropyrum pernix
1EP0_A       162 MVddlIISEKDRNWKPLRENP 182 Methanothermobacter thermautotrophicus
WP_010884527 165 Dp---ILSEKDKKWPTLRELI 182 Pyrococcus horikoshii
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