Conserved Protein Domain Family
AlgP_Nterm

?
NF038178: AlgP_Nterm 
AlgP family protein
This HMM describes the conserved N-terminal domain of a protein that has extensive lysine-rich repeats in the C-terminal half, typically PAAK, and is called histone-like for that reason. Some reports have called AlgP (also called AlgR3) a regulator of alginate biosynthesis, responsible for a mucoid phenotype in Pseudomonas aeruginosa, but recent work casts doubt on the specificity of the connection to alginate.
Statistics
?
PSSM-Id: 439492
Aligned: 32 rows
Threshold Bit Score: 147.922
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_017521355   2 SANKKPVTTPLHLLHQLSNSLIEHLEGACKQALVDSEKLLAKLEKQRGKAQEKLHTARTKLQDATKAGKAKAQAKAKSSI 81  Pseudomonas nit...
WP_017937636   2 PAKKKKVSTPLHLLQQLSGSLLEHLEQACSQALVDAEKLLTKLEKQRAKTQEKLHKTRSKVQEAAQAGKAKAQAKARKAV 81  Pseudomonas the...
WP_019408436   2 SANKKSVNTPLHLLQQLSGSLLEHLESACSQALADAEKLLAKLEKQRGKAQEKLHKSREKLQDAAHAGKSKAQTKAKSVV 81  Pseudomonas psy...
WP_003295542   2 PAKKKSVTTPLHLLQQLSHSLIEHLDKACSQAIRDAENTLAKLQKQRGKAQDKLTKARAKLDEAGSAGKAKAQAKARTRH 81  Stutzerimonas s...
WP_012703221   2 PTKKPPVTTPLHLLQQLSQSLLVHLEEACSQALQDAEKALAKLEKQRSKVQEKLHEARAKLQDAALAGKAKAQVRGRKAV 81  Azotobacter
WP_015278404   2 PAKKKSVTTPLHLLQQLSHSLIEHLDKACSQAVKDAESALAKLQKQRGKAQEKLTKARAKLDEAGSAGKAKAQTKARTRL 81  Stutzerimonas s...
WP_003301098   2 PAKKKSVTTPLHLLQQLSHSLIEHLDKACSQAIKDAESALAKLQKQRGKAQDKLTKARAKLDEAGSTGKTKAQTKARSRL 81  Stutzerimonas s...
WP_019341272   2 PATKNAVTTPLHLLQQLSKSLVEHLEKACTDAQKDAELLLAKLEKQRGKAQEKLVKARAKLDEAGSAGKSKAQGKARSKL 81  Stutzerimonas s...
WP_017244278   2 PAKKKSVTTPLHLLQQLSHSLIEHLDKACSQAIKDAEGALAKLQKQRGKAQDKLTKARAKLDEAGSTGKPKAQTKARARL 81  Stutzerimonas s...
WP_003286051   2 PAKKKSVTTPLHLLEQLSNTLVEHLDKACQLALQDAEGTLGKLEKQRGKAQERLAKARTRLDEAARAGRAKAQGKARTRI 81  Pseudomonas stu...
WP_017521355  82 AELDGVLDVLKTRQTETRAYIANLKRDVQESLKLAQGVTKVKEAAGKSLATR 133 Pseudomonas nitroreducens
WP_017937636  82 AELEELLDTLKVRQAETRAYIVQLKRDTQESLKLAQGVGKVREAVSKLLDSR 133 Pseudomonas thermotolerans
WP_019408436  82 KELEDVLDSLKERQTETRSYILQLKRDAQESLKLAQGIGRVKEAVGKALSTR 133 Pseudomonas psychrophila
WP_003295542  82 TELEESLALLQARQSETLTYLAELKHDAQESLKLAQGIRQVADAADKALQSR 133 Stutzerimonas stutzeri
WP_012703221  82 DELEPLLDDLKARQAETRDYIVRLRHDTLQALELAQGVAQVREAVAQALVAP 133 Azotobacter
WP_015278404  82 TELEDSLALLQSRQSETLTYLAELKRDAEQSLKLAQGIRQVADAADKELLSR 133 Stutzerimonas stutzeri
WP_003301098  82 GELEESLALLQSRQSETLTYLADLKRDAEQSLKLAQGIRKVADDADKALRSQ 133 Stutzerimonas stutzeri
WP_019341272  82 TELDDMLALLQTRQSETLSYLADLKRDAEQSLSLAQGVTQVEKAAAQALASR 133 Stutzerimonas stutzeri
WP_017244278  82 GELEESLTLLQTRQSETLNYLAELKRDAEHSLKLAQGIRQVADAADQALQGR 133 Stutzerimonas stutzeri
WP_003286051  82 GELEEAMTLLQARQSEMLGYIAELKRDIAQSLHLAQSVRQVGDSAAQALQAR 133 Pseudomonas stutzeri
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap