Conserved Protein Domain Family
quorum_AgrD
?
TIGR04223: quorum_AgrD 
cyclic lactone autoinducer peptide
Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.
Links
?
Statistics
?
PSSM-Id: 275064
Aligned: 127 rows
Threshold Bit Score: 27.092
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
ZP_03752782   7 KELLGLMQKAVKLEVEKNGNEAsryCPVILHQPKRPKKLK 46  Roseburia inulinivorans DSM 16841
CBK91243     11 QSCANLALKTLSVIAKNNANSL---CRGLLYEPNGAKKLK 47  Eubacterium rectale DSM 17629
CBK93882     11 QKSARLVLQAVTAIARSNANSL---CRGLLYEPKVPTQLK 47  Eubacterium rectale M104/1
ZP_08115661   7 VMVYSSLCSILAILAYFNADIN---CLGIIYEPEIPESLK 43  Desulfotomaculum nigrificans DSM 574
ZP_07052701   9 KMLAKSIERQSIKVADSSSSKA---CSMFAYEPKSPMVLK 45  Listeria grayi DSM 20601
ZP_04177632   6 EKLITILGELLMKLASFGSLYM---CWGFLDEEELPEELK 42  Bacillus cereus AH1273
CBK92518      5 NYSKRIIRNLVITFALKKSCTN---CAGFMYEVKKPKSLS 41  Eubacterium rectale M104/1
WP_003721672 10 KFLSRKLEEQSMKVADSSMSKA---CFMFVYEPKSPFVKM 46  Listeria
WP_013809373  3 TRVIFLLSTVLFFVAQVNANIT---CLFGHYEPEIPDSLR 39  Desulfotomaculum carboxydivorans
WP_013726334  6 NKFISCLGLCLIVLSNVISASA---CFGFCGEPDVPKSML 42  Clostridium botulinum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap