Conserved Protein Domain Family
rSAM_QueE_Ecoli

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TIGR04322: rSAM_QueE_Ecoli 
putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE
Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.
Statistics
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PSSM-Id: 275126
Aligned: 21 rows
Threshold Bit Score: 404.74
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_03319508    9 FQTLQGEGVFTGVPAVFIRLQGCPVGCSWCDTKQTWDKEPAKESTLGDIALKTQDSDFWAMSDAESLIQLMLQNGYTAKH 88  Providencia alc...
ZP_06039283    8 FETIQGEGVFTGVPAVFVRLQGCPVGCAWCDTKQTWETLESDQTSFPQILLKTSDAPTWCQASAQDVIERYRAQGYQAKH 87  Vibrio mimicus ...
ZP_08748917    8 FETIQGEGAFTGTPSVFIRLQECAVGCAWCDTQQTWSADPEDEVKLVDILAKQGDSSTWCRVSSTEIVALYQQK-YGAKH 86  Vibrio scophtha...
ZP_06053771    8 FETIQGEGTFTGIPSVFIRLQGCPVGCPWCDTRQTWDTLPLDQRDFGTIIAKNDESPLWARVSAEDILSHLQSR-YTAKH 86  Grimontia holli...
ZP_01216253   11 FQTIQGEGVHTGCAAIFIRLQGCDVGCAWCDTKHTWSANENDKVPLNLVTDLSNSSAQWADVSAEHILAEIKNLEYTAKL 90  Psychromonas sp...
WP_013811529   9 FQTLQGEGFFTGVPAIFIRLQGCPVGCSWCDTKHTWEKEANREVDMQRILVKTEESDAWGSASAEQLLAVMRQQGYTARH 88  Serratia
WP_012535365  12 FETIQGEGTFTGVPSIFLRLQGCPVGCSWCDTKQTWDVELSDKTDLQTILAKTEDTPSWTELSSTQIIEMLENQGYTAKH 91  Aliivibrio fisc...
WP_011072466   9 FETIQGEGVFTGVPAIFVRLQGCPVGCAWCDTKQTWDLLETNKVSPEQVITVDGTVGRWANHTAQSLIEAFHAKGYTARH 88  Shewanella onei...
WP_013344892   9 FETIQGEGHFTGVPAVFLRLQGCPVGCAWCDTRHTWEVLAEDQVEPGLVIGAGDGEPRWAQWPLEQLVAHLTGPQYRARH 88  Ferrimonas bale...
WP_012737943   9 FQTLQGEGHFMGTPAIFIRLQGCPVGCSWCDTKHTWEKKNEQQVDLFSILQKKTANDFWSHSGEQNLLAVIRAQGYQASH 88  Candidatus Hami...
ZP_03319508   89 IVITGGEPCIYDLTALTQTLEANGFQCQIETSGTYPILCTENTWVTVSPKVGMKGGLQVLEQAINRANEIKHPVAREKDI 168 Providencia alc...
ZP_06039283   88 IVITGGEPCIYDLTELTQAFEAIGCQCQIETSGTYEILATPTTWVTVSPKVAMKGKLPILDSALQRANEIKHPVATEKDI 167 Vibrio mimicus ...
ZP_08748917   87 IVITGGEPCIYDLRPLTEAFESIGCVCQVETSGTADIRVSEQTWVTVSPKVAMKGRLEVLEGSLIRANEIKHPVGTQKDI 166 Vibrio scophtha...
ZP_06053771   87 IVITGGEPCMFDLMPLTSLLDAHGYRCQIETSGTYVVYATENTWVTVSPKINMRGKLPILKEALDRANEIKHPVGTESDI 166 Grimontia holli...
ZP_01216253   91 VIITGGEPCIFDLRPLTALLHAHGFQTQIETSGTYPILVDAKSWVTVSPKVNMRAKKEVLLSALQRADEIKHPVGTQKDI 170 Psychromonas sp...
WP_013811529  89 VVITGGEPCIYDLTPLTQLLEENGYGCQIETSGTHEVQCSAKTWVTVSPKVNMRGGMKVLDQALQRADEVKHPVGRERDI 168 Serratia
WP_012535365  92 MVITGGEPCMYDLTSLTQELEQHGYRCQIETSGTYPILASENTWVTVSPKINMKGKLPVLPVALSRANEIKHPVGTTKDI 171 Aliivibrio fisc...
WP_011072466  89 VVITGGEPCMYDLHELTHMLHRAGFATQIETSGTFEVKCDKDTWVTVSPKVNMKGGYPVLAQALNRANEIKHPIATQNHI 168 Shewanella onei...
WP_013344892  89 LVITGGEPCMYDLRPLTERMIAAGWRCQIETSGCFEVKTDPQTWVTVSPKVGMKGGLEVQRSALERANEIKHPVAMQKHV 168 Ferrimonas bale...
WP_012737943  89 VVITGGEPCLYDLTPLTQLLEQEGYFCQIETSGTHLVHCTPSCWVTVSPKINMRGGFKIQHQALERADELKHVVARKSDI 168 Candidatus Hami...
ZP_03319508  169 EALDQLLSLRTQGQLPIVALQPISQKTSATKLCIDTCIQRNWRLSIQTHKYLNIQ 223 Providencia alcalifaciens DSM 30120
ZP_06039283  168 DNLDELLVRASVDAKTVIALQPISQKPRATELCIRTCIARNWRLSIQTHKYLNIA 222 Vibrio mimicus MB451
ZP_08748917  167 QQLDDLLAGVAIKPSTVIALQPISQKNRATQLCIDTCIARNWRLSIQTHKYLEIA 221 Vibrio scophthalmi LMG 19158
ZP_06053771  167 EKLDELLKHV-DLKGKEVALQPISQKARATALCIETCIARNWRLSVQTHKYLNIA 220 Grimontia hollisae CIP 101886
ZP_01216253  171 EQLDALLARLGDTHNKTICLQPISQKANATALCMRTCIARNWRLSVQLHKYLDID 225 Psychromonas sp. CNPT3
WP_013811529 169 EALDALLATLHDEKPRIIALQPISQKEEATRLCIETCIARNWRLSMQTHKYLNIA 223 Serratia
WP_012535365 172 EQLDALLEGVELLEDVTIALQPISQKPRATELCIETCIKRNWRLSIQTHKYLAIA 226 Aliivibrio fischeri
WP_011072466 169 DELDELLSDI-DVSAKTICLQPISQKPRATELAMKVCIARNWRLSIQTHKYLNID 222 Shewanella oneidensis
WP_013344892 169 DELDALLAGV-ALEGKEVALQPISQQHRANELCVRVCIERNWRLSVQTHKYLNID 222 Ferrimonas balearica
WP_012737943 169 ETLDALIGNLKDRKKRIISLQPVSQKKSATQLCIDTCIERNWRLSVQMHKYLGIE 223 Candidatus Hamiltonella defensa
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