5CD4


Conserved Protein Domain Family
Cas_CT1975

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pfam09344: Cas_CT1975 
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CT1975-like protein
CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.
Statistics
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PSSM-Id: 430543
Aligned: 52 rows
Threshold Bit Score: 344.239
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5CD4_O             5 INIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKsgyyaqnIGESSL-----------RTIhlaQLRD 73  Escherichia...
jgi:Rmar_0483      6 VQIHTLTAYPAALLNRDDAGFAKRLPFGGAIRTRVSSQCLKYHWRN-------FSGEHAlygld-vprslRSRe--TFKR 75 
Q60AD1             3 LQIHSLTSYHATLLNRDDAGLAKRIPFGDAVRLRVSSQCLKRHWRE------------SlkqtiplptglRTRh--VFER 68  Methylococc...
Q0AA32             3 LQIHTLTSYHAALLNRDDAGLAKRIPFGSAERMRVSSQCLKRHWRQ------------AlkdvislpsgiRTRh--FFER 68  Alkalilimni...
WP_008522376       8 VQISTLTTYSASLLNRDDSGLAKRIPFGDSVRTRISSQCLKRHWRN-------AGGPYGldkag-dalslSVRsrfSFPE 79  Jonquetella...
jgi:CAP2UW1_2252   7 IQIHTLHTYPAALLNRDDAGLAKRLPLGNAVRTRISSQCLKRHWRV-------VEDRFAlscld-vpmaiRSR---GTLE 75 
CBL74466           7 IQIHTLHTYPAALLNRDDAGLAKRLPYGGAIRTRISSQCLKRHWRV-------ADDAFSlaklg-vpmatRTR---YVAE 75 
Q0BRF9             7 LQIHSLHSYTASLLNRDDSGLAKRLPYGSAVRTRISSQCLKRHWRM-------DEGTFSlhriegaeeavRSRd--LVTK 77  Granulibact...
jgi:Dshi_3217      7 LQIHTLTSYTAALLNRDDSGLAKRLTYGGAPRTRISSQCLKRHWRI-------AEDPHAlhaidgadaasRSRe--LVTR 77 
Q2RXJ6             7 LQIHSLHSYTAALLNRDDSGLAKRLTYGGSNRTRISSQCLKRHWRMa------EHDPHAlqtlggyvgsfRSRe--LVTD 78  Rhodospiril...
5CD4_O            74 VLRQKLGer---------fDQKIIDKtlallSGKSVD---------------------------EAEKISADAVTPWVVG 117 Escherichia...
jgi:Rmar_0483     76 CIARPLVeegyplrlvvafALHLQKLivsdeSLSKTDfkklmsd--------------evddatLLDQLKSNQVIILGRP 141
Q60AD1            69 EIYPRLKqegvedslakqlTLSLMGLllqksDKTAKPekakkgkngheeqaefdfeegagteesSAGDLRVKQPILFGRP 148 Methylococc...
Q0AA32            69 EVCRRVIaegvedekarelTGKLIDAvmhskEAR------------------------------EKDSLFLKQPVLFGRP 118 Alkalilimni...
WP_008522376      80 LIEKPLVaegleqklvvsgSQKLQQLlyngeEKGDTKkdkkkk----------------ieldeDGYSAKRNELVVLGRP 143 Jonquetella...
jgi:CAP2UW1_2252  76 LISKRIQesgvsetmaqaaAEAMRDAglldkGGKEKK---------------------------GDDALKTGQAVLLGKP 128
CBL74466          76 LIRQRLIeqgidearayatAEALLEAlfgekADKKKE---------------------------GVKALQTGQAVLFGNE 128
Q0BRF9            78 RLREPLQgtvdvn-ilnaiEPAFQAAvyg---------------------------------kkGADDKSSRQPLLFGAP 123 Granulibact...
jgi:Dshi_3217     78 KVLGGLgpepv----vaaiEPVFQKAvyg----------------------------------dkGTSKTARQTLLFGDR 119
Q2RXJ6            79 LVIKPLEgrypqd-ildvlEPEFQKLvyg---------------------------------dkADKGKKSRQTLLLGQP 124 Rhodospiril...
5CD4_O           118 EIAWFCEQv--------------------------aKAEADNLDDKKllkvlKEDIa-----aIRvnlqQGVDIALSGRM 166 Escherichia...
jgi:Rmar_0483    142 EVDYLTRRirerldalrevwadaaaplsdeqlervyQELQAIGKGEL-----KKNL-------KGlylaAGLDAALFGRM 209
Q60AD1           149 EVDYLISLlkacaeegsga----------------------ekalqaklkgdKANFkamlkaaGHgdlyAGLEGALFGRF 206 Methylococc...
Q0AA32           119 EADYFVSLitecarsgedp----------------------gstlkdrvkaeKKNFrallqaaGGsdleSGIEGALFGRF 176 Alkalilimni...
WP_008522376     144 ELEYLKQIirdaissssnike-------------------idnavkdfytkrKSNL-------LAlragCGVDAAMFGRF 197 Jonquetella...
jgi:CAP2UW1_2252 129 EIDYLVRRcvdlasdgveekgf-----------------kelitlwlkgkdeKRNI-------EAlkhgSGLESALFGRM 184
CBL74466         129 EIAYLARRcrditgdfsdpva-------------------lkaevakflkeeKKNI-------EAmklgSGLESALFGRM 182
Q0BRF9           124 ELRYLAEQftriatsatdpksa-----------------kaaaedftkdklfQNTMka---mrDSvslpGGLTSALFGRM 183 Granulibact...
jgi:Dshi_3217    120 EIAWLRGEaerlvaeaggdag------------------aaaktaeawakdfKKNIaa---mrDAvalpGGLTAALFGRM 178
Q2RXJ6           125 ELAWLARRaeelaagandak---------------------alqkavadwrkDANFka---msENaalpGGLVAALFGRM 180 Rhodospiril...
5CD4_O           167 ATSGMmteLGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQE------QGSAHLGTQEFSSGVFYRYANINLAQLQENLG 240 Escherichia...
jgi:Rmar_0483    210 ATSDV---LARGDAAIHVAHAFTTHAEESESDYFTAVDELVAqegegeLGSGHLNNQELTSGLFYGYVVVDVPLLVSNLE 286
Q60AD1           207 VTSDV---LSRSDAAVHVAHSFTVHGLDTEVDYFTVVDDLNre---eeTGAAHAGDMELGAGLFYGYVAVDIPLLVSNLT 280 Methylococc...
Q0AA32           177 VTSDI---LARTDASVHVAHAFTVHSLNNEVDYFTVVDDLKEpg--edAGAAHAGDMELGAGLFYGYVVVDVPLLVSNLS 251 Alkalilimni...
WP_008522376     198 VSGDV---DAKVTAAVHVAHSFTIHGEQSETDYFTAVDDLVe------QGTGHINAAELNTGIYYGYVVVDVPQLISNLC 268 Jonquetella...
jgi:CAP2UW1_2252 185 VTSDV---LTSREAAVYVAHAFTVHQAQVENDYFTVVDDLLQda--geLGSAGIFDTELASGLYYGYVVVDVPQLVQNLE 259
CBL74466         183 VTSDL---LANRDASVSVAHAFTVHEAQVENDYFTVVDDFAQae--dgAGSAGIFDTELASGLYYGYVVIDVPQLVANLE 257
Q0BRF9           184 VTSDP---EANIDAPVHVAHAFTTHAEQTESDYFAVVDDLAgv---edTGADHIGSTELTSGLFYGYVVIDVPTLVSNLT 257 Granulibact...
jgi:Dshi_3217    179 VTSDT---SANITAPVHVAHAFTVHGEESESDYFTAVDDLse----dePGADTIQETELTCGLYYGYVVVDLPGLAKNLG 251
Q2RXJ6           181 VTSDP---AANIDAPVHVAHAFTVHAEEAEGDYFTAVDDLKKde--sdSGADTIQETELTSGLFYGYVVIDLPGLIGNCG 255 Rhodospiril...
5CD4_O           241 Ga-------------sREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSD-MPLSMANAFEKAVKAKD---G 303 Escherichia...
jgi:Rmar_0483    287 Gvppaa-----wqeadRTLAAEVVRRLLHLIATVSPGAKLGSTAPHAYAQFMLVEWGRsQPRTLANAFHRPVSLDGe--G 359
Q60AD1           281 Gcdttr-----waeqePADVRKVLTGLIRAIATVSPGAKLGATAPYAFSEFVLLETGKqQPRALSNAYLQALPMRG---D 352 Methylococc...
Q0AA32           252 Gcerqaw---reqteaCADARDVLAALVHSIATVSPGAKLGATAPYARTDCALLETGTtQPRALANAYLEPLPARG---D 325 Alkalilimni...
WP_008522376     269 Gcdpkn-----sadadRTLAAQVTSNLIHLMATVTPGAKLSGTAPYAASWLVLAEWGNsQPRTLADAFFEGLKLGSd-gS 342 Jonquetella...
jgi:CAP2UW1_2252 260 GedfnecfasgtpadrRVLAGQVVQHLLHLIATVSPGAKRGSTAPFDWAKFMLVEAGDwQPRSLAGAFHDALPLSGsggT 339
CBL74466         258 Gikvedvf--tigadkRGLAGKVVQHLLHLIATVSPGAKRGSTAPYDWAKFVLVEAGDwQPRSLAAAFHDPIPLKGd-sS 334
Q0BRF9           258 Gvaasn-----wlaadRKMAAEVTACLIGQIATVSPGAKLGSTAPYGYATTMLVEAGDrQPRSLAEAFRDPAEPTV---- 328 Granulibact...
jgi:Dshi_3217    252 Pa-------------aADLSGPILHNLVHLVAEVSPGAKLGSTAPYGRAGLMLLEAGDrQPRSLAEAFRDPVPAAA---- 314
Q2RXJ6           256 Gd--------------KEIAAQVVNNLVYLIAEVSPGAKLGSTAPYGRADLMLIEAGDrQPRSLATAYRKAIAPDR---- 317 Rhodospiril...
5CD4_O           304 FLQPSIQAFNQYWDRVANGYGLNGaaaqfslsdVDPITAQVKQMP---TLEQLKSW 356 Escherichia coli K-12
jgi:Rmar_0483    360 VLVNSYRALGRYVEQMDRMYGKLTerrl-aaidLPEAVQRQLQVD---TLNAVPEI 411
Q60AD1           353 PLQAAIDALAKYLRALDAMYGRTSdsrs-vastRAFDADLAPTNSldaSIGAALDA 407 Methylococcus capsulatus
Q0AA32           326 LMQQSVNTMGHYLKSLDDMFGEETsrfv--satRDTTSLPCAHRG---PLSETIDg 376 Alkalilimnicola ehrlichii MLHE-1
WP_008522376     343 ARSLAVQLLAEYIQKYDAMYTPQLirrc-asiePCQIPGAENG-----SLDELCEA 392 Jonquetella anthropi
jgi:CAP2UW1_2252 340 IRERTVDRLTKEIAAMDDAYGAPLsrrf-laidQEVQVPGAERL----NLASLAdw 390
CBL74466         335 IRGRAASKLAKEIAAFDAAYGMPTarrf--lsldELAVPAAERA----TLSQLgew 384
Q0BRF9           329 --KDAEDKLHQKLKAFDEAYQTGEdrrl-lslsNDPGIKNVSRT----SLPELMQW 377 Granulibacter bethesdensis CGDNIH1
jgi:Dshi_3217    315 GMAGATDALTEHLAEMDAAYSTGEdrrf-lslrNTDLPGAARG-----TLKELADW 364
Q2RXJ6           318 --EQAVAALDGCLAKLDATYETGEarry-lslaETPLTGPATSGLeklSLKALADW 370 Rhodospirillum rubrum ATCC 11170
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