Conserved Protein Domain Family
CBS_pair_bac

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cd04629: CBS_pair_bac 
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341392
Aligned: 104 rows
Threshold Bit Score: 149.125
Created: 29-Nov-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #########   #########     ######   ######  ######             #####            
YP_268967     10 MNHYPVTFTEtMSVEEATLRFLktkQIGGPVVDqnyKVLGFISeGDVLEKMLETIYfnenvaiIKNIMSREVLSVKpYDS 89  Colwellia psych...
WP_009669203  10 MDHNPHAIHAtTSIKEAVTMMLkegVIGAPVVDknnQLIGYLSeQDCVKDMLNDAFyseepgpVSSAMQTEVVSVTpETS 89  gamma proteobac...
ABC27070      11 MDTHPAFVAAdASIIEAVDILLkkgISGAPVVNehkHVIGFISeKDCIKKLLLSSYhcdapatVGEVMHKATVTVDpEAS 90  Hahella chejuen...
EIK44873       5 MQSNAQAIPAdASVRDVVEHLLkwnVTGAPVVDqqrRVIGFVSeQDCIKDMLNSAFyaedsdsVTRIMRRDVLSVTpDAS 84  Cellvibrio sp. BR
EKF73730      10 MARHPVSVKAgTELTEVVDLLLqhkYTGLPVINaeqKVIGFVSeQDCLRQLLVSSYhcegalvVEEIMHDEPLTVKpDDS 89  Alcanivorax hon...
AFU97371      10 MNPQPLVLSTrDNVRDVVARLIdakVTGAPVLDdngALAGFVSeQDCIQEMLNEAFfceeavnVSKVMQTNVLTLTpDTS 89  Simiduia agariv...
ABD80972      10 MDRNPHAINQlASVREAIGVLVnegITGAPVIDdskTLVGFISeHDCIRQLLNDAFyydesaaIGAIMRTDLKSVTpDTS 89  Saccharophagus ...
EIF41453      11 MKSPSPAVKQgTDLGEVVETLLkfgVFGLPVVNdqrELVGFVSeQDCIHSVLVSSYhcegapiVDDVMSREVLAVDaESS 90  gamma proteobac...
AAZ27995      10 MDRSPLSFRPdSGVIVALRQLLtasLSGAPVVDgdnNLIGFLSeADCMRGALMGGYfstigelVRDRMTTEVESIGtNTN 89  Colwellia psych...
EGM78597       8 FQREFPRLQQdDTIVQAVQQLRqfnLTGAPVFDkdnNLVGYLSeQDCLAAMLHASYfcslhntIAQVMSKKVVTVLtSDS 87  Rheinheimera sp...
Feature 1                                             
YP_268967     90 IIELGQTMRkdKPKVYPVIDddGNLLGTISRNEVLQA 126 Colwellia psychrerythraea 34H
WP_009669203  90 IVEIAQTIMtnRPKNYPVVTd-GKLVGLISRSDVLRA 125 gamma proteobacterium IMCC1989
ABC27070      91 IVDLANYMDdhRPKVYPVVDd-GKLVGVISRTHVLMA 126 Hahella chejuensis KCTC 2396
EIK44873      85 ILEIAETMLgnKPKNYPVVEh-GKLVGLINRRQILQA 120 Cellvibrio sp. BR
EKF73730      90 VVNVAEMMIkqKPKIYPVVDdrGTLVGLLTREQVMRA 126 Alcanivorax hongdengensis A-11-3
AFU97371      90 VVEVAQTMMgnKPKNYPVIQh-GKLVGLINRRDILRA 125 Simiduia agarivorans SA1 = DSM 21679
ABD80972      90 ILTIAEAMAngPPKNYPVVDn-GKLVGLISRAHVLRA 125 Saccharophagus degradans 2-40
EIF41453      91 IIDLAQKMGklKPKSYPVTEd-GKLVGLITRSAILAS 126 gamma proteobacterium BDW918
AAZ27995      90 LVDVAEKFLhnNRRVLPVVEg-GKVVGLVQRRGVLEQ 125 Colwellia psychrerythraea 34H
EGM78597      88 VVDSAVIFTslHLHQLPVLEn-GVVVGVLNRGQVVRA 123 Rheinheimera sp. A13L

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