5YI6,3PKM,3QJJ


Conserved Protein Domain Family
Cas6

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COG1583: Cas6 
CRISPR/Cas system endoribonuclease Cas6, RAMP superfamily [Defense mechanisms]
CRISPR/Cas system endoribonuclease Cas6, RAMP superfamily is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 441191
Aligned: 182 rows
Threshold Bit Score: 103.045
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5YI6_A         5 MRIELELQTDNFTVIPYN-HQYYLASAIYNKIHSANPAYAKRLHNy------QKFKFFTFSLLQIR--KRVIRKE-GIet 74 
WP_020459007   1 MRFRVDVGAd-kATIPWRdVFGPARAVAYELIRGQDADLAEELHGrgy--agSSLRPLGLSSPYFRg--pA--RGhDVyr 73 
WP_012851302   1 MRFRLDVAAd-rPELAWRdVHGPARGVVYGLLKSQDPELSQQLHDvgw--qgHALRPLAISPPIFSg--aK--KRkGAya 73 
WP_012844140   1 MRLRLLLT-PSCEPVPFT-YPHRLAGVLHRWLGQND------WH--------DSLSLYSFGWLQGg----RMGr--GGlh 58 
WP_013175506   1 MRLHVIFSSDGPIKLPWN-YLHLLHGYLYAAITRTYPDVGVFLHEqgfvvedHKYKMLVFSRLFPK---KAAGi-dDGli 75 
WP_066217028   1 MRLHLSCT-TNTGKIPRY-YKPKLKGTLHKWLGNYQ------SHD-------GKYSTYSISNIDGi----KFNGDf-Gta 60 
WP_079559120   1 MRLHFKIK-SENQIVPFN-HQHLLTGVIHKWLGWNQ------HH--------GELSLYSFSRLEGg----K--KArGGlv 58 
WP_093942658   1 MRIRLHLSTq-aTHIPWDqLLRPGRGLIYRLLRETAPELGARLHEs------TRPMPAGHGAPVFPk--aR--RVpRRya 69 
WP_093942694   1 MRLRVEVTTa-aREIPWRdVLRPGRGIVYEILSEFAPELGARLHEsgw--gpYRMVPVGHSAPRFSgaARR--RDrGRyv 75 
WP_114985523   1 MKFRIDLT-PNTEAVPFN-YAHQLCGIFHHWLGPNE------LH--------DLMSLYSLGWLRGg----K--AEgGGlw 58 
5YI6_A        75 IDGKAYLYISSPNNEFIENFVAGLLEDGKLRV-GNVEFFVRKAKILPIPKKF-N---ILKTISPIYLKTMie------tE 143
WP_020459007  74 ASKDGTVWFGSPVPRIAGALLAGLAGRRQLRW-GSVELDVHGVQLESTPDHSsGe-tVFSTVTPVLAR------------ 139
WP_012851302  74 TSSKGSVWIGSPVPRIAGCLLAALAGRQHLRW-GEATLQIKGVEVENTPDHSsGe-aVFETVSPVILK------------ 139
WP_012844140  59 FPKGAFWTLSFYEGEPVERLVRGIFRDPTVIA-G---MAVASVQTLPVPSFG-Qr-aVFRVESPVVARRVr--------- 123
WP_013175506  76 LQPPFHWWVSSPLSPAMEALAATMLKEGTALI-GGVELRIKKIEAEPVPEFT-Gr-vLCEMISPLIASTGiv------rN 146
WP_066217028  61 KKSGLKFFISSIDKEFIKKIILGIKKDNTMFS-G---ITVEQVSIESDPVFD-KkieHFFVDSPVLVK------------ 123
WP_079559120  59 FKNGSHFFFSTPDEDLAKTIIKGVQKDPKIFN-G---LIINEIIMQPAPDFT-Dr-dQFYPASPIFIKRYd--------- 123
WP_093942658  70 AGGPGHLELGSPIPGLAESWHQALTRTDTLDW-GGTALRLHDAELLPPPDFTaGt-aEFQTETPVALRRLpspdrpptpE 147
WP_093942694  76 TGGPGVVEFSSPIPEVVEALTAGLSQARVLDW-GGTALRVSGVTAVEPPEFSaGt-aRMASVTPVVVKgpp------agD 147
WP_114985523  59 FRDGASWDIGIYNDAVAEQLVRGLLLRD-FRFyG---MGIRKVSPLAPPDFSaGh-hRFLSDSPVLLRRVe--------- 124
5YI6_A       144 D----GLKTYDLLPNNSKFYENLKNNLKKKYEAFYNEKcD-MN--FEF-EVLKF--RPkrmrikNdIYCRCSEMVFKVWG 213
WP_020459007 140 ------YEDRYIFPDHPAFVATLVHNLSHKADVLGLPNe------VEF-EVLSAg-PPrkffvqH-TPRHGCVVRARVHA 204
WP_012851302 140 ------HEGRYLLPGDAAYEERLVHNLRHKADVLGLPSd------VRV-EVLAAg-PRrrfdvqG-AMRIGATVKLSITA 204
WP_012844140 124 A----DGGRDYLTWEDEAADEVLTRVLRRKLVA-AGlghLaPQatIRF-DRRYRgaKTklvrikG-IDHRGSLCPVIVEG 196
WP_013175506 147 R----KLHKRFLLPSEPDFWRVVEDNLRRKAVALGLSVvHtDE--MKF-EVIgn-wKSrlfeaqG-TWVRGYEGSFIIMG 217
WP_066217028 124 ------RDNKYFFAGDKKADEYMTDLMNKKLKA-AG---YdDEvqIMF-DPHYKksSTtevkyrD-IRNICSICPVYIKG 191
WP_079559120 124 -----EKNTEHIIYDDPRANQFLIETLERKMQK-TGl--TdDTldIQF-DLSYHraGTklvtykN-IKNRASWCPVIIKG 193
WP_093942658 148 GepvrLPPLPDLLPYEEGFAEALTANLRRKLDTLGLDPd------ITIdEITPTg-PKraftvgD-GRQTGATANVRLHG 219
WP_093942694 148 DaggrVRAQRWLLPGEAEWEVFFLRNLRRKAESLGLDPe------VGLtEVWRVg-PKrsfavgD-GKKVGAEVGVTLAG 219
WP_114985523 125 D----DYSRTHVTFRDPDSSRILERVIQKKAQE-AGh-aTaGSlrLRF-DERYRnpKTrlvrikD-IDYRASVCPLIAEG 196
5YI6_A       214 DYDLIKFGYECGFGEKNSMGFGMV 237
WP_020459007 205 APALLDALYDWGLGLGTNQGFGWI 228
WP_012851302 205 APRLLDAIYDWGLGLVSIQGFGWI 228
WP_012844140 197 PPEAVQFAWLVGAGELTGCGFGAL 220
WP_013175506 218 AEKLFALAYEAGLGERNSQGFGMF 241
WP_066217028 192 TPETIAFAWNVGIGNSTGIGLGAI 215
WP_079559120 194 KPETKAFAWEVGLGNSTGVGFGAV 217
WP_093942658 220 APTALRALWSWGLGRGNAAGFGWI 243
WP_093942694 220 APETLRAVSSWGLGVANLAGFGSV 243
WP_114985523 197 SPEALEFLWTVGAGEMTGVGFGSL 220
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