Conserved Protein Domain Family
queuosine_YadB

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TIGR03838: queuosine_YadB 
glutamyl-queuosine tRNA(Asp) synthetase
This protein resembles a shortened glutamyl-tRNA ligase, but its purpose is to modify tRNA(Asp) at a queuosine position in the anticodon rather than to charge a tRNA with its cognate amino acid. [Protein synthesis, tRNA and rRNA base modification]
Statistics
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PSSM-Id: 274810
Aligned: 57 rows
Threshold Bit Score: 339.132
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011802307   6 YRGRFAPSPTGPLHAGSLVAALASWLDARAHQGQWLVRIEDVDTPRCLPGTGPAILQQLAACGLFPDAPPVCQSRRGALY 85  Polaromonas nap...
WP_011497592   5 YRGRFAPSPSGPLHFGSLVAALGSYLRAKSLGGQWLVRIEDIDPPREIAGASSQILKTLTAYGFEWDEDVLYQSQRTAAY 84  Shewanella deni...
WP_011327304  13 YCGRFAPSPSGPLHFGSLVAAVGSYLDAKANQGKWLVRIEDIDITRVVKGADTDILNTLQAYSLHWDENVVYQTQRLDLY 92  Pseudoalteromon...
WP_011071163  15 YVGRFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDILRTLEAYGFEWDDTVLYQSARTDAY 94  Shewanella onei...
WP_011866926  33 YVGRFAPSPSGPLHFGSLIAALGSYLRARAEQGQWLVRIEDIDPPREVKGASDLILKTLEAYGLHWDGAVLYQSSRLDDY 112 Shewanella loihica
WP_011235478   2 YRGRFAPTPSGPLHLGSLVAAVGSYLDAKAHRGEWLVRIEDVDKPRAVPGAADTILTQLEAHGLEWDGSVLYQSQRDSVY 81  Idiomarina loih...
WP_011784203   6 YRGRFAPSPTGPLHFGSLVTALASWLEAKHARGDWLVRIEDLDPLREPPEATGQILHSLECHGLFPDEPVRFQSRRHDAY 85  Marinobacter hy...
WP_011399960   9 YRGRFAPSPTGPLHFGSLVGALASYLDARSRQGIWLVRIEDIDPLREVPGAADSILRTLEAHGMLWDESIIYQSHRLSAY 88  Hahella chejuensis
WP_011576642  16 YVGRFAPSPSGPLHLGSLVAALGSYIRARQMDGKWLLRIEDIDPPRALAGADDLIKESLVRHGLLWDDEVTYQHDSHERY 95  Pseudoalteromon...
WP_012071673  12 YRGRFAPSPTGPLHFGSLVSALASYLDAKKQQGSWIIRIEDVDGTRCKSSYAQQIIETLNSYQLFSDEPIRTQSQHNALY 91  Marinomonas sp....
WP_011802307  86 QQALDRLVATGWAYPCGCTRQDIARAlaasgqarqrhgELVYPGTCRQglNGRPAR--AWRLRVDKNeqksafaqavqal 163 Polaromonas nap...
WP_011497592  85 QAQIDSWIAQGQAYFCQCSRKQIQAM------------GGTYDGRCNRcsPKLTs--gAVRIVNHSK------------- 137 Shewanella deni...
WP_011327304  93 QDVVNSLHNKNLIYACSCSRKQIKAI------------GGIYQGHCKN--LHQDIThsALRLSQSFA------------- 145 Pseudoalteromon...
WP_011071163  95 QAKLDQLLAQDDAYFCQCSRKQIQAM------------GGIYDGRCHQ--LATPHQsgAIRLVNRAQ------------- 147 Shewanella onei...
WP_011866926 113 QARLNSLLAEDKAYYCQCTRKQIQAM------------GGTYDGRCAi--RTAKHTagAIRIRNTLA------------- 165 Shewanella loihica
WP_011235478  82 QHQLNQLENAQRLYQCDCSRRAIRARs------------dHYDGYCRNrqPRSTp--yALRFINNNP------------- 134 Idiomarina loih...
WP_011784203  86 QRTIDNLLAQCKAYRCRCSRKQLKDNh------------GYHPNRCRRgdTSPGDGphAVRFALEEE------------- 140 Marinobacter hy...
WP_011399960  89 SELLAQLLANGHAYPCPCSRKELSERh------------GRHLDACRLr-QTPPGAeyAYRFAVTDA------------- 142 Hahella chejuensis
WP_011576642  96 EQALNWLQANGHSYCCQCNRKQRLANp----------kGQSCP--CAQ--LALAKDecATVLRNTLG------------- 148 Pseudoalteromon...
WP_012071673  92 EQKLHELKKQSFVFPCNCTRQSLAQY------------NGNHPFECQSs----iSEphSWRLRTSSA------------- 142 Marinomonas sp....
WP_011802307 164 iaidfiansstglmetEVTWQDRLLGRQHQNVSRDVGDFVLRRADGLWAYQLAVVVDDAAQGITHVVRGADLADNTARQI 243 Polaromonas nap...
WP_011497592 138 ----------------IDRFDDVLMGTIIQDAHFSGEDFIIKRSDGLYAYQLAVVLDDAYQGITEVVRGSDLLQPTVRQI 201 Shewanella deni...
WP_011327304 146 ----------------TNQFNDLIQGDINVNNAFAAEDYIIKRSDGLFAYQLVVVIDDIDQGITRIVRGADLIEPTVRQI 209 Pseudoalteromon...
WP_011071163 148 ----------------VAEFTDNLMGKVVVDHDFATEDFIIKRSDGLYAYQLAVVLDDAHQGISEVVRGCDLIEASCRQL 211 Shewanella onei...
WP_011866926 166 ----------------IDHFDDELLGPIRVEPEFAAEDFIIKRRDGLYAYQLAVVMDDAFQGITEVVRGADLLTSSARQA 229 Shewanella loihica
WP_011235478 135 ----------------VDTFNDRAHGLLEDHSASVSEDFVLKRRDGLYAYQLAVVVDDIEQGITDIVRGSDLITPSFWQL 198 Idiomarina loih...
WP_011784203 141 ----------------ASHWQDDLLGPQVQMVHAELDDPVILRKEGFYAYQLAVVVDDIDQGITHVVRGSDLLDMTAQQQ 204 Marinobacter hy...
WP_011399960 143 ----------------EHSFNDLIQGAVPYRLHGELDDFVIRRKEGFFSYQLAVVCDDLAQGVSHIIRGSDLLDSTPLQY 206 Hahella chejuensis
WP_011576642 149 ----------------GQHIQDLALGAVSF-AKGACDDFILRRKDGLYAYQLAVVVDDIYAGVTEVVRGADILPSTAYQL 211 Pseudoalteromon...
WP_012071673 143 ----------------VYQCQDSIQGTLLFTDDLKNNCPVLKRKDGFFSYQLAVVVDDHLQQISHLVRGADLIETTAQQL 206 Marinomonas sp....
WP_011802307 244 LLQRALGLPTPQYLHTPLVLGANGEKLSKQNGAQALDTSRPLAALNQAAAVLGLPPQTGDTADALAAWV 312 Polaromonas naphthalenivorans
WP_011497592 202 SLYRSLGLAEPGWLHLPLACTEPGFKLSKQNHAQGIDLLNPGPSINAALGFLGQ---AAVELASPTIML 267 Shewanella denitrificans
WP_011327304 210 SLFKQLNSPVPQFAHLPLAVAKPGFKLSKQNYAPAICKQNPKPVLIDVFAFLGLAVHSQLMDLNIEQLL 278 Pseudoalteromonas haloplan...
WP_011071163 212 SLYQSLGLTAPQWLHLPLACLTPGFKLSKQNHAQAIDKQHPQASLNAALTFLGQS---TVEPTSAAQML 277 Shewanella oneidensis
WP_011866926 230 TLFNLFDDNAPKWLHLPLACAEPGMKLSKQNHAPAIDLKAPQASINAALAFLGQAPCDidsvktmlaqa 298 Shewanella loihica
WP_011235478 199 TLWQYFTGKQPRMMHLPLIMNDDGLKLSKQNHAPSIESSQARNNLFTALDYLGIKPESELRHSPVSEIL 267 Idiomarina loihiensis
WP_011784203 205 QVFRALGAEPPHWLHIPVIVNEQGQKLSKQTHAPALDDDHPARNLFLALQALGQQPEPTLARSTVEEVL 273 Marinobacter hydrocarbonoc...
WP_011399960 207 QMYQALGRACPQVGHFPVVVDASGAKLSKQNLAPGLDNRQIMNNLRAAATALLIDNIELMQAETPHELL 275 Hahella chejuensis
WP_011576642 212 ALYQLFDQPPPVYLHLPLVMGDNGQKLSKQNHAPGLNDAVANSNLCRALEVLGLPVPRALNNATVNDIL 280 Pseudoalteromonas atlantica
WP_012071673 207 YLYDLFGWTPPNICHIPLITNHYGDKISKQNHAKAI-ENHHLPTLIRALHYLKIDLAS---PSSITEAL 271 Marinomonas sp. MWYL1
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