Conserved Protein Domain Family
YPO0640_fam
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NF038335: YPO0640_fam 
YrhA family protein
Members of this family include YrhA from Escherichia coli, which is found as a pseudogene in the K-12 model strain, and YPO0640 from Yersinia pestis. Only full-length forms are used in the seed alignment for this HMM. The function of this protein family is unknown.
Links
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Statistics
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PSSM-Id: 468481
Aligned: 90 rows
Threshold Bit Score: 92.2421
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_080283007   5 IDMMVNELSKLMEDN---GYRIFPPv-SINFLESmtkanssstdLPPVLEDINTDILfflktqPDYYYFLTKMDGFEFDG 80  Enterobacter ch...
WP_167522365   4 LASAVNEFNRLGEKM---GYEINPP--YTGSIPSc--------dFGRGIVQK-TAFW------QQYEKLLRISNGLFADG 63  Mixta intestinalis
WP_025382461   4 LEKAVNEFNRISKSM---GYNINPP--YTGKLETy--------dFGREISPEQPDFW------KQYGSFLRISNGLFADG 64  Yersinia similis
WP_034896426   4 LEKAVCEFNCISKSM---GYEITPP--YTGEFIQy--------dFGRGIEHGQSDFW------HQYYAFVSISNGLFADG 64  Erwinia typographi
WP_190295954   4 NDNIINQLKQLIIKR---REKVTPAvvFPDELYDy--------nFGRKIGKAPRLFW------EQYKNFVERLDGINIDG 66  Mixta calida
WP_085071880   4 SNNLINQLKQLVMEN---DERLAPAivFPDDLYDy--------nFGRKIGKAPRLFW------EQYKNFVEHMDGINIDG 66  Pantoea alhagi
WP_002208840   4 LNNIVDELNSLALKL---EYDVLPPavFPSSLYEy--------dFGLKIGKAPQEFW------DQYKALVELADGFDLDG 66  Yersinia pseudo...
WP_002210060   8 LSTLIGKIHTIAKSRlaaGYEDRNGi-NEHQVTP----------C-HHALTLLGGDDf----aESYLPFLRNVNGFDLNG 71  Yersinia pseudo...
WP_101834006   8 LVTLIAALHDIAQSYadaGYEDQAGi-REDQVSA-----------CHRVLVTLGGDHf----aGSYLPFLQQMNGFDLNG 71  Yersiniaceae
WP_101814972   8 LVTLIAALHDIEQSYadaGYEDQAGi-REDQVSA----------C-QRVLVTLGGDRf----aESYLPFLRQMNGFDLNG 71  Chimaeribacter ...

WP_080283007  81 VILYSFALQLeehnvpvnNIFLYNdNFRNN--------DIF-VNTDLSERVV--IGQDSISFFTYDLKENVYQIRDNVgT 149 Enterobacter ch...
WP_167522365  64 HTFYGLTT----------DNNEPG-LIEFNtv-----lNTQgFEFESMKGRIv-IGENNTDTLYYDTLTGKWESCDRIgT 126 Mixta intestinalis
WP_025382461  65 CVFYGMSD----------GEDTAG-LIEFNna-----lNIPgFKDETMTNLIv-IGGNNTDTFYYDSRTGKWEACDRIgT 127 Yersinia similis
WP_034896426  65 HTFYGVNDS---------GDPETGkLIEFNqa-----lEVMgLEDESMMGRIv-IGGNNTDTFYYDTRSGKWESCDRIgT 129 Erwinia typographi
WP_190295954  67 CIIYGIKNH---------FDYKND-LFTFNefltkiasDFPgLMIEENFYCIe-IGSSSLDTYTYDTRTNKWESRDKQqY 135 Mixta calida
WP_085071880  67 CRIYGIENH---------FNYEND-LFTFNgfltkiacEAP-DTMIAEDFYCieIGGSSLDTYTYDIRSNKWESRDQQqY 135 Pantoea alhagi
WP_002208840  67 FRMYGIEKH---------GDYEND-LFTYNgykarldkEAPsLMSDESRYCIe-IGSSSLDTYTYDVRYGKWESRDRVqY 135 Yersinia pseudo...
WP_002210060  72 VRLFGYFDDKgde--rdlRKQLAD-LKAFP--------ELF---PDAFNDWVl-IGETDTDILIFNKKNGSYENRDRIgL 136 Yersinia pseudo...
WP_101834006  72 VRLFGYFADKede--rdlRKQSAN-LHAVP--------DLF---PDALKKGVv-VGETDMDILFFNRESAVYEIRDFIgV 136 Yersiniaceae
WP_101814972  72 VRLFGYFDDKede--rdlRKQSAN-LHAVP--------DLF---PDAFKNGAv-VGETDMDILFFNRETSVYESRDFIgV 136 Chimaeribacter ...

WP_080283007 150 EKIFGSFDNFSDFLREILETVA 171 Enterobacter chengduensis
WP_167522365 127 ENVWESCNTLAELLETQITMLK 148 Mixta intestinalis
WP_025382461 128 DRVWESCDSLAELIETQIKMLE 149 Yersinia similis
WP_034896426 130 NNIWESCDTLAQLIETQNNMLK 151 Erwinia typographi
WP_190295954 136 QNLFISCDTLAEFLQAVLDDIR 157 Mixta calida
WP_085071880 136 QNLFISCDTLAEFLQAVLDDIR 157 Pantoea alhagi
WP_002208840 136 DNLFISCSNLIDFLAAILAEIR 157 Yersinia pseudotuberculosis complex
WP_002210060 137 DRLNESYDDIVGLLISLMPLIE 158 Yersinia pseudotuberculosis complex
WP_101834006 137 ERINERHRTITGLLRALIPLIE 158 Yersiniaceae
WP_101814972 137 ERVNERYRTITGLLRALIALIE 158 Chimaeribacter californicus
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