Conserved Protein Domain Family
Porin_8

?
pfam16966: Porin_8 
Porin-like glycoporin RafY
This is a family of Gram-negative Gammaproteobacteria putative raffinose-like porins.
Statistics
?
PSSM-Id: 435680
Aligned: 5 rows
Threshold Bit Score: 420.446
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_015696176     99 LYGDVEFNVDGASRSGQltsIRTQDNKNFRDGN-NERWDVNGRLLIGLDGYRRNDNGQFSGFSVQPTADLNGSM-NLDDA 176 Rahnella aqu...
jgi:Tola_0596    36 IGGDVEYDLTADSFSEG---AKTYNDKGVLIADaTDTQALGGRILLDINGERVLANGNFAGFKINPVYSPNGNYgNGEDS 112
CBV42677         35 FGGDVELDINAQNSQEGpifLEGEFEN-------NDEYNQTGRILLEAAGEHT-SGQNYARFKVQPLVGTDGGM-GVDDA 105
wugsc:KPN_03260  65 FYGDVEFNLDGASRTGSltsVKTSANKSWAPGD-KERWDINGRILLGFDGRRNGADGQYAGFSVQPLADMDGKM-NLDDA 142
Q8ZMK7           92 FYGDVEFNMDAASRSGSltsTRTSANKDWAPGT-NERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADLTGKM-NLDDA 169 Salmonella e...
WP_015696176    177 AFFFGEEKD-WMAKIGRFEAYDMFPLNQDTFIeYsgntandlyadGYG-YVYMMKEGRGRSDSGGNILLNKNLGNWYFEL 254 Rahnella aqu...
jgi:Tola_0596   113 WFAFGVKND-WAVKMGHYEAYDLSPAGQDTYV-V-----------GYGdKLYRAKAARGRANSGSQAMFSKEAGQWHMEV 179
CBV42677        106 WLALGNRDNgLELKVGRFEAFDLFPLGQDVFVeYsgdtandlysdGHG-YIYQAKEGRGRGGDSGQVLLSQTRGDFYAEI 184
wugsc:KPN_03260 143 VFFFGQQDD-WKIKIGRFEAWDMFPLNQDTFIeYsgntandlysdGYG-YIYMMKEGRGRSSSGGNLLFSKTVDNWYFEV 220
Q8ZMK7          170 VFFFGREND-WKIKVGRFEAYDMFPLNQDTFIeYsgntandlysdGYG-YIYMMKEGRGRSDSGGNFLLSKTIDNWYFEV 247 Salmonella e...
WP_015696176    255 NTLMEDGTSLYADrnyhgneLD---NDKNTVYLRPIIAWKGDAFSVAAAMETNVVNNAygYKDG-DEfvDQSKRNGYGLT 330 Rahnella aqu...
jgi:Tola_0596   180 STLFGDDNGMYDN-------MTgvvKNKDPLLARPVVAWTGDTVTVAVGAELNLITDA--YVDAaGE--DVSDWTGYGAT 248
CBV42677        185 STLFGDRTNLFASdtyhgyaIDpenDAKNSFIVRPVMAWSPGPWTLAAGVETNVVDDA--IVDErGE--DISDRTGYGTR 260
wugsc:KPN_03260 221 NTLVEDGSSLFVDqnyhgnaLE---NRKNVVYVRPVAAWQSGVWSAAAAIESNLVNNAygYQSQsGRwvDQSNRTGYGLT 297
Q8ZMK7          248 NTLLENGSTLYTEkqyhgmdLS---NDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAygYYEN-GKwiDQSDRTGYGFT 323 Salmonella e...
WP_015696176    331 MTwngqkADPENGIVANLSTAYMDASDEKDFTVGANALWKRFELGYIYAHNKIEDFNINGvrasdydddwfdepgNYDIh 410 Rahnella aqu...
jgi:Tola_0596   249 AT-----VKASDDLSFSLRGAYKAADEGDGYSVGPGMQYQNFYAAYLYGQNENSATDEDT---------------EYNV- 307
CBV42677        261 LSys------lDDFSVNANLAYLDAHEEENLTLGLNALWHDFGLGYIHARNDIDSVKESAevvs--------mpgTYTSd 326
wugsc:KPN_03260 298 MSwntlkSDPQDGAVVNLSTALLDAADETDFSAGINALWHRVELGYIYAHNKIDQFNMAGvtsecdgdcailapgRYDIh 377
Q8ZMK7          324 MTwngqkTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNidavceddcwvtdpgNYDIh 403 Salmonella e...
WP_015696176    411 tVHASYLIPNVMDMENFNVYLGAYVSMLEADKTYsGDDDsd-eRYGARVRFKYFF 464 Rahnella aquatilis
jgi:Tola_0596   308 -VYASYKIPAVMGIDNFDMYLGASWGDEQAEGAA-DTNE----QLGGRVRFKYFF 356
CBV42677        327 tLYTSYRFAQVMGIDNLDIYLGAYYSKIDQK----DSDGgdadRYGGRLRFKYYF 377
wugsc:KPN_03260 378 tLHTSWQLPNIMAMPNFNIYLGAYASWLDSTAAK-SGNPd--eRYGARVRFKYFF 429
Q8ZMK7          404 tIHASYLFPNVMDMKNFNIYLGAYASWVEANPNN-GDNSed-aRYGGRLRFKYFF 456 Salmonella enterica subsp. enterica s...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap